Dtei011922.1
Basic Information
- Insect
- Drosophila teissieri
- Gene Symbol
- -
- Assembly
- GCA_016746235.1
- Location
- CM028595.1:19156880-19158136[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-12 4.8e-09 35.6 0.1 1 44 128 171 128 172 0.91
Sequence Information
- Coding Sequence
- ATGTTGAACTCTGTGTACGAATCCGCCGCCGATATGAATCCTCTCAAGCGCAAGAAGCTGTCGGCCATTTCAAGCATGCTCCTGAGTGGAAATCGCGACACACCCATCCTGAGAAACGTTCTGGCCCAAGCTAATCCCGCTGACTCCTCGCAACCCGGACCCATGAATGCCAATGGAGAGAAGACGCCCACTCATCCACACCAGACCACCCAGCTTCCAGCCGGATTGGGAGTAAGTGGAGGCGAGCGCAACCACAGCTTCAATGGCTCCGACTACGGCGGCGACAAGGAACCACTCTCGCCCTACACAGATCGTTCCTTCGAGGAGGAGACCGGCCAGTCCGGCGGCAAGAAGCCGGAATGGAAGCGGTACAAGCAGTATACCAGAGCGGACATGATGTGCGCCATCCAGGCGGTGAGGGAGGGTATGAGTGCCCTGCAGGCGAGCAGGAAGTACGGTCTGCCCAGTCGCACCCTCTACGACAAAGTCCGTAAGCTGAACATCACCACGGGACGTGGCACCCACCGCACACCCAAACGCAGTCCTCCGGGCGCTGAGTCCTCGCAGGGCTTTTCATATTCCGCTGCGGCAGCCGCTGCTGCCCACAACTACGGACATGGACATGGACATGGCCATCACTCGGAGGTGAAGCGTGATCAGAAGGTGGACCATGTGCCCGCCCATCACGGCATGCCGCCCACCATTCCACCCTCGGCTGCGGCCCTCCTGGATCACGCTTTCCTCCAGCAGGCTCTGGAGAACCGTGGTGGTGACATGGCCGGCCGCGAGGCTCTCCATGCCATGGCTCTGGCCGCAGCCGCCCATGCCGCTGCCAATCGCCTGTCCAGCAGTCCGGCGGAGATGGACCAGCGCTCCAATGGCCATGGCATGCGGTCGCCAAGTCCGCAAGGTCGTCACTACCCGCACGAGCAGGAGGCCATGGACTTGGAGATGGAGAAGCACGAGCAGAATGTTATCAAGCGGGAACGCGACCAGGACGAGCGTGAGGATGCGGACGATGAGGAGGATCACGAGCAAGAGCACGTGGAGGATCTGTCGCTGGCCAGGAAGGAGCGGCCACCATCGCCCTACTCGCCCCAGCCAACCGAGGGTGGTGCCGGCGTGATCATGCACGCCAGCAGTGCGTCCGCCAATGGCAAGGATCACGAGGACTACCCATCCTCGCCGCAGTTCGTGCCCATTGGACTGAAGAGGGAGCTGTTGGAAGGCGAGGACGCTCAGGCCCGGGCCGACTGA
- Protein Sequence
- MLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQTTQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYGHGHGHGHHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSSSPAEMDQRSNGHGMRSPSPQGRHYPHEQEAMDLEMEKHEQNVIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPTEGGAGVIMHASSASANGKDHEDYPSSPQFVPIGLKRELLEGEDAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00515522;
- 90% Identity
- -
- 80% Identity
- -