Dgun007788.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- -
- Assembly
- GCA_011057485.1
- Location
- WTSR01000055.1:1-1100[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-12 4.1e-09 35.9 0.1 1 44 143 186 143 187 0.91 2 2 10 1.6e+04 -6.6 2.7 4 11 293 300 293 303 0.75
Sequence Information
- Coding Sequence
- TCCGCCGGGCAGTGGCCACTGACgccctccgccgccgccgccatgCTGAACTCCGTGTACGAGTCCGCCGCCGACATGAATCCGCTCAAGCGCAAGAAGCTGTCGGCCATCTCGAGCATGCTGCTCAGCGGCAGCCGCGACACACCGATCCTGCGCAACGTGCTGGCCCAGGCCAATCCGGCCGACTCCTCGCAACCCGGACCGATGCCCAGCAACGGGGAGAAGACGCCAACGCATCCGCACCAGGGCAGCGGTCAATTGACGTCCGGATTGGGTGTGAGTGGCGGCGAACGGAATCATAGCTTCAACGGATCGGACTACGGCGGCGACAAGGAGCCGCTGTCGCCGTACACGGACCGCTCCTTCGAGGAGGAGAGCGGCCAGTCCGGCGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACCCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAAGGGATGAGCGCCCTGCAGGCCAGCCGCAAGTACGGCCTGCCCAGCCGCACGCTCTACGACAAGGTGCGCAAGCTAAACATCACCACCGGCCGTGGCACCCATCGCACGCCCAAGCGCNGNCCACNGGNCGNCGAGTCCGNTNAGGGATTCACTTNCTCCGCGGCGGCCGCAGCTGCCGCCCACAACTACGGGCATGGTCATGGTCACGCCNNNNNNcatggccatggccatggagGCCATNNNTCAGAGACAAAGCGTGACCCGAAGGCGGACCATGTGCCCGCCCACCACGGCATGCCGCCCACCATACCGCCGTCGGCGGCCGCCCTTTTGGACCACGCCTTCCTGCAGCAGGCGCTGGAGAACCGCGGCGGTGACATGGCCGGCCGCGAAGCGCTCCACGCCATGGCtttggccgccgccgcccatgCCGCCGCCAACCGGCTGTCCAGCAGTCCGGCGGAGCCGGACCAGCGCTCCAATGGCCATGGCATGCGCTCGCCCAGTCCGCCGGCACGGCACTATCCGCACGAGCAGGAGGCCCTGGATCTGGAGATGCACGAGAAGCACGAGCCGAGCCTGATCAAGCGGGANCGCGACCAGGNCGNGCGCGAAGNTGCCGATGACGAGGA
- Protein Sequence
- SAGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGSRDTPILRNVLAQANPADSSQPGPMPSNGEKTPTHPHQGSGQLTSGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRXPXXXESXXGFTXSAAAAAAAHNYGHGHGHAXXHGHGHGGHXSETKRDPKADHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSSSPAEPDQRSNGHGMRSPSPPARHYPHEQEALDLEMHEKHEPSLIKRXRDQXXREXADDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00607720;
- 90% Identity
- -
- 80% Identity
- -