Basic Information

Gene Symbol
Kdm5
Assembly
GCA_016746235.1
Location
CM028594.1:9786763-9796768[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8e-27 2.2e-23 82.3 0.1 2 89 231 314 230 314 0.95
2 2 1.2 3.3e+03 -1.6 0.0 6 57 1544 1599 1540 1605 0.47

Sequence Information

Coding Sequence
ATGTCCGCCAAGACTGAGGCGGACAACACGACGGCCGCCAACTCTGGCGGCGGAGGCGGAGCAGTGGGGAGCGGCACATCATCCGGTGGTGGCGCATCCGCGAACGGAACAGCGACTCCGGCACGCCGCCTGCGCACCCGAAACTCAACGGGCAACGGAACCAATAGCGGAAGCGAGTCCGTAAAGAAGTCGAACGCCAACGACGAGCCCTCAACCCCAGTCACCCCGGCAGGAGCAACAGGATCTCACGCCCATGTTCCGCCAGGAGCGTCTCCGGCGGTAATGGAACGGCCTATGCCCAGTGTTCCCATGAATCACGCCAGCAGCAGTGTGTCAGCCAGCAAAAAGTATCACAATAGCTGTCCTCATCCCACGCCCACGCCTGCGCCCACTGGGCATAAGAAGTCGGTGCACACGCAGCCGCACAGCAGCAACAAGTTTGACCAGGGAAAGAATGAAGAGTTCCACTTCGACACACCGCCAGAGTGCCCCGTTTTCCGGCCCACAACTGAAGAGTTTAAGAATCCGCTGGCCTACATCAGCAAGATCCGCTCCATAGCTGAGAAGTGTGGAATCGCAAAGATCCTGCCGCCGGCCACCTGGTCGCCGCCGTTTGCAGTGGACGTGGATAAGCTACGCTTCGTGCCACGTGTCCAGCGGCTAAATGAGCTGGAAGCCAAGACGCGCGTCAAGCTCAACTTCCTTGATCAGATCGCAAAGTTCTGGGAGCTGCAAGGCTCTTCGCTAAAGATCCCAATGGTGGAGCGCAAGGCCCTTGACTTGTATACGCTGCACCGCATCGTGCAGGAGGAGGGTGGCATGGAGCAAACCACAAAGGATCGCAAGTGGGCCAAGGTGGCCAACCGGATGCAGTACCCATCCAGCAAAAGTGTAGGCGCGACCCTGAAGGCGCACTACGAACGCATCTTGCATCCCTTTGAGGTATATACGTCGGGAAAAGTTCTAGGACCCACCCCAGCGTCATCTGGATCTGGTGACACGCCCGTTAAGTTGGAGGATGGGGGCGGAACCGACTACAAAGCCCATGAAATTCCCACGCGGCAGCAAATTGCGCCGCCTAACGAGACAAACACACGCCGCTCTAAGCGTTTCGGAAACTCCAATGCCAGCTGCGGCCTGAGTGGTGTCACACCATCGACAAAGCCATCTGCGGGCGTGTTTGTCAAGACGGAGACCAAGGAAGAATTTAAGAGGGATCTCCTCAGCAGCTTCAATGCTGTCAACAGCGGTGGTTCGCCCATAGCTACTGGCACTCCCGCCAATACTCGCGGAGCCAGCCAGAAGAAGGGAGGAGAGCCTCCAGCCCTAATCGTAGACCCACTGATGAAGTACATTTGCCACATCTGCAATCGCGGCGACGTCGAGGAGTCTATGCTGCTTTGCGATGGATGCGACGACAGCTACCACACCTTTTGCCTGTTGCCGCCTCTGACCAGTATACCCAAAGGCGAATGGCTTTGCCCGCGCTGCGTCGTAGAGGAAGTAAGCAAGCCGCAGGAGGCGTTCGGTTTTGAGCAGGCGGAGAGGGAATACACTCTGCAACAATTTGGGCAAATGGCTGACCAGTTCAAGCAAGAATACTTCCGCAAACCGGTGCACTTGGTGCCCACTGAGATGGTAGAGCGCGAGTTCTGGCGCATCGTATCTTCTATCGATGAAGACGTTACCGTCGAATATGGGGCGGACTTGCACACAATGGATCACGGCTCCGGGTTTCCCACTAAAAGCTCGCTATATTTGTTGCCGGGCGACCAAGAGTATGCAGAGTCGAGCTGGAACCTTAACAACTTGCCGTTGCTGGAGGATTCTATTCTGGGCCACATCAACGCCGACATTAGCGGCATGAACGCTCCGTGGATGTATGTGGGCATGTGCTTCGCAGCCTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTATCTTCACTGGGGAGAACCAAAAACCTGGTACGGTGTTCCGGGGTCCTGTGCTGAGCAGTTTGAAGAGACTATGAAGCAAGCAGCTCCAGAACTTTTTTCATCGCAGCCCGATCTGCTTCACCAGCTGGTGACGATTATGAACCCCAACATTTTAATGAACAATCGTGTACCGGTATTCCGCACCGATCAGCATGCAGGCGAGTTTGTGATCACCTTCCCCAGGGCCTATCACGCAGGCTTTAACCAAGGCTATAACTTCGCGGAGGCCGTCAATTTTGCACCAGCCGATTGGCTGAAGATGGGACGCGAGTGCGTTAACCACTATTCCATGCTCCGCCGTTTCTGTGTCTTTTCGCACGACGAGCTCGTTTGCAAGATGGCGCTGGAGCCAGCGAAGCTTACCTTTGGCATCGCTACTGCGTGCTACATCGACATGGCTGAAATGGTCGACACGGAGAAGAAACTGCGCAAATCACTTCTAGAGTGGGGCGTCACCCGCGCAGAGCGTCGCGCCTTCGAGCTAGTGAACGACGATGAACGCCATTGCCAAGAGTGCAACACCACGTGCTTCCTGTCGGCGGTGGCCTGCGAGTGCAACGACAAGTTGATCGTCTGCTTGCGCCACTACACAGTACTCTGCGGCTGTGCTCCTGAGAAGCACACTCTGATATATCGCTATACACTGGACGAGATGCCGCTGATGCTGCAGAAACTAAAGGTGAAGGCGCACAGCTTCGAGCGATGGCTTTCACGTTGCCGTGACATAGTCGATGCACATACACCCACCTCGGTGACTCTGCAGGAACTGCAGGAGTTGTGCAAGGAGGCCGAGACGAAGAAGTTTCCCTCTTCGCTGCTCATCGATCGCCTTAATGCAGCGGCCGTCGAGGCAGAGAAATGTGTCACAGTCATTCAGCAACTGGGTATCAATAAGGTGCGAACTCGCTCGGACCACAACCAGGAAGCTGCTCAGTACAAGCTTACCATGGAGGAGCTAGAGTTGTTCGTTCAAGAAATCGATAATCTCTGCTGCATTATTGACGAGGGCGCTTCTGTGCGAGAGCTGCTTGTTTTGGGAAAACAGTTTGTGGAACGATCCGAAGGCCAGCTGCAGTTATCGCTGGAGTCTCTGGAGGAGAGTGAGCTAGAAACGTTAATAAACGAAGGTAGCTCCTTGCGCATCGAACTGCAACAGCTTGACCAACTACAGAAGCGACTGAAGCAGTGCAAGTGGTACAAGCGCTCGCAGGGATTGAGGGAGACCAGCTCGAAGCTGACCTACCAAGACGTGAAGAACCTGCTGCACATGGCGGCTGCTGACCTTGATCCCACGGATCCGTATGTCGACAAGGAGATGCGAAAATTGCAACAGATCGGTGCAGATATCGAAGCCTGGGAGTCGCAGGCGGCCAAGTATTTCCGGCGCCTGACCCAACAGCACGAGTTGGGCGAAATCGAGCAGTTCTTGAAATCGGCCACCGACATCAACGGTCAAGTGCCTTCGCACGGCCTGCTAAAGGATGCACTACGAAAGGCGCGTGAGTGGCTCCGGGCCGTTGAGCAGCTACAGCAGAACAACCACGTCACATATTGCCACACACTGGAGGCAATGATCGAGCGTGGCATGAACATACCCATCCAGCTGGAAGAGCTGAGCCGAATGCAGGGACACCTAAACAGTGCACATCAATGGAAGGACAACACAGCGTGTGCCTTCCTTAAGAAGGGCACCTTCTATACGCTCTTAGAGGTGCTCATGCCCCGCTCAGACGCCATCAACATAGACTCGGATCTCAAGCCGCGCTTCCAGGATGATTTTCTGAAAGAGAAAAATCCGGCGGAGATTGTGGCCAGCTTCAAGAACGCCGAGGAGCAGGAGCTTCTTGATATGCGCGATCTACGGCGGCAAAATATGAACAAAAACCCTATGCGCGATATGTTCTGCTTGTGCAAGTCCGAGTTCCGAAACTTAATGTTCAATTGTCAGTTGTGCCGCGATTGGTTTCACGAGGATTGCGTCCCACCGCCTTCATCCACAAATCAGAATGGAATTGTTAATGGGGGATCAGGACCAGGTACTAATCGACCGAAGTGGCTATGTCCGAGCTGTGTGCGCTCAAAGAGACCGCGCCTAGAAACCATCCTTCCGCTACTCGTCCAGCTGCAGCAACTGCCTATCCGTCTGCCCGAAGACGAAGCGTTGCGTTGCCTGGCTGAGCGTGCGATGAATTGGCAGGATCGAGCTAGGAAAGCTCTTAGCAGTCCTGACGTCAGTGCGGCCCAAGAAGCAATTCTTGCTCAGCAACAGCAAAAGCGGCGCTCCGAAGGAGGAGCAGGGGTGGGCAATATCAGCAGTCCACGGAAACCACGTCGACGTGGCAGTCTGTCGAAAGAGGCAAGTGGTTCCACAGAGTCCGATGCCGACGACGATGACGACGACGACGAGTGTCGTCTTCGAATCGTCGAAGACAACTTTAGCAACGATGAAGATGAGCCTCGTACCGCCCCCGCGACCTCCACCGTTAACTCCGATCTCCTCAAGCTGCTGTCCGACAGTGAAATTGAAAATTTGCTTGACCTGATGATGGAGGGCGACCTGCTAGAGGTATCTCTAGACGAAACGCAGGAGCTGTGGCGCATTCTAGAAACGATGCCGCCTACGCTGCTGCAGGCGGAGGCCATGGAGCGAGTTGTCCAGTACATGCAGCGTCAACGGCAACAGCAACCAAATCCGCTGCCCACATCCGGCGCCGAAGACTCAAACGACAGTCTGATGGTACAAAATAGTCCCAATAGCAACAGCAATAGTGGTGGTTGCAACGGGATCTGCGAGCAACAGTGGACGCAACAAGAAGAGGCGCTCCAACGACGCTAG
Protein Sequence
MSAKTEADNTTAANSGGGGGAVGSGTSSGGGASANGTATPARRLRTRNSTGNGTNSGSESVKKSNANDEPSTPVTPAGATGSHAHVPPGASPAVMERPMPSVPMNHASSSVSASKKYHNSCPHPTPTPAPTGHKKSVHTQPHSSNKFDQGKNEEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPTPASSGSGDTPVKLEDGGGTDYKAHEIPTRQQIAPPNETNTRRSKRFGNSNASCGLSGVTPSTKPSAGVFVKTETKEEFKRDLLSSFNAVNSGGSPIATGTPANTRGASQKKGGEPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERSEGQLQLSLESLEESELETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHMAAADLDPTDPYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHELGEIEQFLKSATDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGMNIPIQLEELSRMQGHLNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRFQDDFLKEKNPAEIVASFKNAEEQELLDMRDLRRQNMNKNPMRDMFCLCKSEFRNLMFNCQLCRDWFHEDCVPPPSSTNQNGIVNGGSGPGTNRPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAQEAILAQQQQKRRSEGGAGVGNISSPRKPRRRGSLSKEASGSTESDADDDDDDDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDSEIENLLDLMMEGDLLEVSLDETQELWRILETMPPTLLQAEAMERVVQYMQRQRQQQPNPLPTSGAEDSNDSLMVQNSPNSNSNSGGCNGICEQQWTQQEEALQRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603133;
90% Identity
iTF_00529347;
80% Identity
-