Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018153305.1
Location
JAECXX010000210.1:23250148-23257705[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.4e-27 2.7e-23 82.1 0.1 2 89 229 312 228 312 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAGACCGAGGCGGACAACTCGACGGCCTCCAATTCCGGAGGAGGAGGAGTAGGAACCGGCACATCCTCTGCCGGGGGTCCATCTGCGAACGGAACAGCCACTCCGGCACGTCGCCTGCGGACCCGCAACTCGACAGGCAACGGAACAGCCAGCGGAGGCGAGTCAGTGAAGAAGTCGAACGCCAGCGATGAGCCCTCGACCCCTATCACCACGGCAGCGTCAACAGGATCTCACGCCCATGCACAGTCAGCTGCGTCTTCGGCAGTGGTGGATCGACCGATGCCCAGTGTTCCGATGAACCACGCCAGCAGCAGCGTGTCGGCGAGCAAGAAGTACCACAACAGCTGCCCTCACCCCACGCCTACGCCTGCGCCTACTGGGCACAAGAAGACGGTCCACACGCAGCCGCACAGCAGCAACAAGTTTGACCAAGGAAAGAATGAAGAATTCCATTTCGACACGCCGCCAGAATGCCCCGTGTTCCGGCCGACAGTTGAGGAGTTCAAGAATCCGCTGGCCTACATCAGCAAGATCCGCTCCATAGCGGAGAAGTGCGGCATCGCAAAGATCCTGCCGCCGCCCACCTGGTCGCCGCCGTTTGCAGTGGACGTAGACAAGCTGCGCTTCGTGCCACGCGTCCAGCGTCTCAACGAGTTGGAGGCTAAAACGCGCGTCAAACTCAATTTTCTCGACCAAATCGCCAAGTTTTGGGAGCTTCAAGGCTCCTCGCTCAAGATCCCAATGGTGGAGCGCAAGGCCCTTGACTTGTACACTCTGCACCGCATCGTGCAGGAGGAGGGGGGAATGGAGCAAACCACCAAGGACCGTAAGTGGGCGAAAGTGGCCAACCGTATGCAGTATCCCTCCAGCAAAAGCGTTGGCGCCACTCTGAAAGCGCACTACGAACGCATTCTGCACCCCTTTGAGGTGTACACTTCAGGCAAAGTTCTCGGTCCCACACCAGCGCCTACTGGAGCTAGTGGCACCCCCGTGAAACTAGAGGATGGAGGCGGCACCGACTATAAGGCCCACGAGATACCCACGCGGCAGCAAATTGCACCGCCCAACGAGACAAGTACTCGCCGCTCCAAGCGGTTCGGAAACTCGAGTGCCAGCTGTGGCCTGAGCGGCGTCACTCCCACGGCCAAGCCGTCCGCTGGCGTGTTCGTCAAGACGGAGACCAAGGAGGAGTTTAAGAGGGATCTGCTAAGCAGTTTCAACGCCGTGAACAGCGGCGGGCCGCAATTAGCCACCGGCGCCCCCGCCAACACTCGCGGCGCCACCCAGAAGAAAGGAGGCGATCCTCCAGCCCTTATTGTAGACCCGCTGATGAAGTACATTTGCCACATCTGCAACCGCGGTGACGTCGAGGAGTCAATGCTGCTCTGCGACGGCTGTGATGACAGCTATCACACCTTCTGCTTGCTGCCGCCTTTGACTAGCATACCCAAAGGCGAATGGCTTTGCCCGCGTTGCGTGGTCGAGGAGGTAAGCAAGCCGCAGGAGGCGTTTGGCTTTGAGCAGGCGGAGAGGGAATATACTCTTCAGCAGTTTGGGCAAATGGCCGACCAGTTCAAACAGGAATACTTCCGCAAGCCGGTGCACTTGGTGCCCACCGAAATGGTGGAACGCGAGTTTTGGCGCATCGTATCTTCTATTGACGAAGACGTTACCGTCGAGTATGGGGCTGACTTGCACACCATGGATCACGGATCTGGGTTCCCTACAAAGAGCTCGTTATATCTGCTGCCCGGCGATCAGGAGTATGCCGAGTCAAGCTGGAACCTTAACAACCTACCGTTGCTGGAGGATTCTATTCTGGGTCACATCAACGCCGACATTAGCGGAATGAACGCTCCTTGGATGTATGTGGGTATGTGCTTCGCCGCCTTTTGCTGGCACAACGAGGACCACTGGAGCTACTCGATCAACTATCTTCACTGGGGAGAACCAAAAACCTGGTACGGTGTTCCAGGGTCCTGTGCTGAACAGTTTGAAGAGACCATGAAACAGGCAGCACCCGAACTTTTCTCCTCGCAGCCCGATCTGCTTCACCAACTGGTCACAATTATGAACCCAAACATCCTGATGAACAACCGCGTGCCTGTGTTCCGCACGGATCAGCACGCCGGCGAGTTTGTGATCACCTTCCCCCGGGCTTATCATGCAGGCTTTAACCAGGGTTATAATTTCGCCGAGGCCGTCAACTTTGCGCCCGCCGACTGGCTGAAGATGGGGCGGGAGTGCGTCAACCACTATTCCATGCTCCGACGCTTCTGCGTCTTCTCGCACGACGAGCTTGTTTGCAAAATGGCCCTAGAGCCGGCAAAGCTAACATTCGGCATCGCTACAGCCTGCTACATTGACATGGCCGAAATGGTAGACACAGAGAAAAAGCTTCGCAAATCCCTCCTAGAGTGGGGCGTAACTCGAGCAGAGCGTCGCGCTTTCGAGCTAGTCAACGACGACGAGCGCCACTGTCAGGAGTGTAACACCACGTGCTTCCTATCGGCGGTGGCCTGCGAGTGCAACGACAAACTAATTGTCTGTCTGCGCCACTACACTGTACTTTGCGGCTGTGCTCCTGAGAAACACACCCTGATCTATCGCTACACACTAGATGAGATGCCGCTGATGTTGCAGAAACTGAAGGTGAAGGCCCACAGCTTCGAGCGCTGGCTTTCTCGTTGCCGTGACATCGTCGATGCAAACACCCCCACTTCGGTGACACTTCAGGAGCTGCAAGAGTTGTGCAAAGAGGCCGAGACCAAGAAGTTTCCTTCCTCGTTATTAATCGATCGGCTTAATGCAGCGGCTATTGAGGCGGAGAAATGTGTGACAGTCATACAGCAACTCGGTATCAATAAGGTACGCACTCGCTCGGACCACAACCAGGAGGCGGCTCAGTACAAGCTGACCATGGAGGAGCTTGAGTTGTTCGTCCAGGAAATCGATAATCTCTGCTGCATCATTGACGAGGGCGCATCTGTTCGGGAGCTCCTAGTTTTGGGAAAACAGTTTGTGGACCGGTCCGAGAGCCAGCTGCAACTGACGCTGGAGGCGCTCGAGGAAAGTGAGCTCGAAACATTGATAAGCGAAGGCAGCTCTTTGCGTATCGAGCTTCAGCAGCTCGACCTACTACAGAAGCGACTGAAGCAATGCAAGTGGTACAAGCGCTCGCAGGGATTGAGGGAGACCAGCTCGAAGCTGACCTACCAAGACGTGAAGAATCTTCTACACATGGCGGCTGCTGACCTGGACCCCACGGATCCGTATGTCGACAGGGAGATGCGGAAATTACAGCAGATTGGGGCAGACATCGAAGCCTGGGAGGCGCAGGCGGCCAAGTACTTCCGGCGACTTAACCAACAGCACGAGCTGGGCGAAATAGAGCAGTTTTTGAAGTCGGCCGGCGAAATCAACGGACAGGTGCCCTCGCATGGGTTGCTAAAGGATGCGCTTCGAAAGGCGCGAGAGTGGCTGCGGGCCGTCGAGCAGCTGCAGCAGAACAACCACGTAACATATTGCCACACCCTCGAGGCGATGATCGAACGCGGCCTAAACATACCCATTCAGCTGGAGGAGCTAAGTCGAATGCAAGGCCACCTGAACAGCGCCCACCAGTGGAAAGACAACACAGCGTGCGCCTTCCTCAAGAAAGGCACCTTCTATACGCTTTTAGAGGTTCTCATGCCCCGGTCGGATGCCATAAATATTGACTCGGATCTCAAGCCGCGCTTCCAGGATGACTTTCTGAAGGAAAAAAATCCTGCGGAAATTGTGGCCAGCTTTAAGAATGCCGAGGAGCAGGAGCTGCTGGATATGCGCGATCTTCGGCGTCAGAACATGACCAAGAACCCGTTGCGTGACATGTTCTGCTTGTGCAAGTCCGAGTTCCGGAGCTTAATGTTTAACTGTCAGTTGTGCCGCGACTGGTTTCACGAGGATTGCGTTCCATCGCCCTCAGCCACGAATCAAAATGGAACTTTTAACGGGGGAGCAGGAACTAATCGCCCGAAGTGGCTCTGTCACAGCTGTGTGCGCTCTAAGAGACCGCGCCTAGAGACCATCCTTCCGCTGCTTGTCCAGCTGCAGCAACTGCCCATCCGGCTGCCGGAGGACGAAGCGTTGCGCTGCCTGGCTGAGCGTGCAATGAATTGGCAGGATCGAGCAAGGAAGGCGCTGAGCAGTCCCGACGTAAGTGCGGCCCAGGAAGCGATACTGGCTCAGCAGCAGCAGAAACGGCGTTCCGAGGGTGGAGGAGCCGGGGTTGGCAATATCAACAGTCCACGGAAACCACGTCGTCGTGGTAGTCTGGCGAAAGAGGCAAGTGGTTCCACAGAGTCCGATGCCGACGACGATGACGACGAAGACGAATGCCGGCTTCGAATCGTCGAGGACAACTTTAGCAATGATGAGGATGAGCCGCGAACCGCCCCCGTGACCGCCACCATCAACTCCGATCTCCTCAAGCTACTGTCAGACAGCGAAATTGAAAATCTGCTGGACCTGATGATGGAGGGCGATCTGCTGGAGGTCTCCCTAGACGAGACGCTCGAGCTGTGGCGGATCCTAGAAACGATGCCGCCTACGATGCTGCAGGCGGAGGCCATAGAGCGAGTGGCCCAGCACCTGCAACGCCAGCGGCAGCAGCAACCAAATCCGCTCCCCACATCCGGCGCCGAAGACTCAAACGATAGTCTGCTGGTGCAAAATAGTCCCAACAGCAACAGCAATAGTGGTGGGCCGACGGCGTCTGCCAGCAACAGCGGACGCAACAAGAAGAGGCGCTCAAATGACACAAGCGCCAACTCAGCTGTGCCGCGAAAGAAGCAAAACACTCCCAAGCAGACTCCCGCCAAGAAGGGGTCGGCGGCAGCGGGGCGCAAGAGCGATGCCAAGGCTTCCCCAGCAGCATCCGCAACTCCAGGAGCGGATGCCGACGCTGAGAACAAGCAGGCCAACGGCGGAAACACAAACTCTAGTACAGGAGCAGGTGGTGGCAATTCTGCGACTACCACGCCCACACCAGGCTCGACGCACAAGAAGCGCAAACGCATCTCCACAACCGCTACCAACAACAACAACAACAGCATGAACAACAGTAACAGCAGCACCAATATCAACAGTAATTCAACCAGCGCGCAGGGAGCAGCCAACGGCGGCAACAACTCAACTGTCGGTCAGAAGAAGCACGCGCAGCGGTCTCAGCAGGCCGCGCAGGAGGACGACGAGGAGGAATGCCGGGCGGAGAACTGCCATAAGCCCACCGGACGGGAGGTGGACTGGGTGCAGTGCGACGGCGGCTGCAACGAATGGTTCCACATGTATTGTGTGGGACTTAACCGCAGCCAGATTAAGGCGGACGACGATTACATCTGTATTCGATGCACCAAAACAGTAGCCATCGGCGCACCGGGGTCCGGGCACAGTATGAGCGCGGCGACTACGACGACGCCGGGCAAACAGAGGGCGGTGCAATCGGCGCGGTAG
Protein Sequence
MSAKTEADNSTASNSGGGGVGTGTSSAGGPSANGTATPARRLRTRNSTGNGTASGGESVKKSNASDEPSTPITTAASTGSHAHAQSAASSAVVDRPMPSVPMNHASSSVSASKKYHNSCPHPTPTPAPTGHKKTVHTQPHSSNKFDQGKNEEFHFDTPPECPVFRPTVEEFKNPLAYISKIRSIAEKCGIAKILPPPTWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPTPAPTGASGTPVKLEDGGGTDYKAHEIPTRQQIAPPNETSTRRSKRFGNSSASCGLSGVTPTAKPSAGVFVKTETKEEFKRDLLSSFNAVNSGGPQLATGAPANTRGATQKKGGDPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDANTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVDRSESQLQLTLEALEESELETLISEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHMAAADLDPTDPYVDREMRKLQQIGADIEAWEAQAAKYFRRLNQQHELGEIEQFLKSAGEINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELSRMQGHLNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRFQDDFLKEKNPAEIVASFKNAEEQELLDMRDLRRQNMTKNPLRDMFCLCKSEFRSLMFNCQLCRDWFHEDCVPSPSATNQNGTFNGGAGTNRPKWLCHSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAQEAILAQQQQKRRSEGGGAGVGNINSPRKPRRRGSLAKEASGSTESDADDDDDEDECRLRIVEDNFSNDEDEPRTAPVTATINSDLLKLLSDSEIENLLDLMMEGDLLEVSLDETLELWRILETMPPTMLQAEAIERVAQHLQRQRQQQPNPLPTSGAEDSNDSLLVQNSPNSNSNSGGPTASASNSGRNKKRRSNDTSANSAVPRKKQNTPKQTPAKKGSAAAGRKSDAKASPAASATPGADADAENKQANGGNTNSSTGAGGGNSATTTPTPGSTHKKRKRISTTATNNNNNSMNNSNSSTNINSNSTSAQGAANGGNNSTVGQKKHAQRSQQAAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCTKTVAIGAPGSGHSMSAATTTTPGKQRAVQSAR