Dtei001388.1
Basic Information
- Insect
- Drosophila teissieri
- Gene Symbol
- rfx7.L
- Assembly
- GCA_016746235.1
- Location
- CM028597.1:5832588-5839280[-]
Transcription Factor Domain
- TF Family
- RFX
- Domain
- RFX domain
- PFAM
- PF02257
- TF Group
- Basic Domians group
- Description
- RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-33 7.4e-29 100.1 0.1 3 78 310 385 308 386 0.97
Sequence Information
- Coding Sequence
- ATGTCCGAGAAGCACGGCCAGCTGGGTGCGCAGTGGACGAAATCAGCGGCGCCAGCAGCAACAACAGCACCAGTTTCCAATTCCATTCCCATACCTCAACCGATCCCTGTGGCACTCCCCCTTCAGAAACCCAACGCCAATCCCTATGGGAACTGCAGCCTACAGCCTGCGGATATAGTCTACGGTGCAACCAGATTTCAAGGAACTGCTATCCATGCGAAGGCCTCTCCTTTGACCATTACACCAGTGGGCCCTGGCGGCGGAACACCTGCGTCCGCCCAAATCTCGCCCACGAGTCACACCCATGTACCTGTACCTGTAGCCACGCCCAGCGGCTTTGTGCCGCCTCCGTTTACCAATGTCGCCAGCGCCAGTGGAGGAGTCTCCACTTCCGTGCTTACTCCGAATCCCTTTGCAACGGCTGCTGGAAATGCTGCTGCCGGACTGGCCTTTGCCAATGCCTTCAACTTTAGCACAGCCCAGCAACTGGGTCTTGGCAAGATCATGCATGCCATGGGTGGAGCAACAGTAGGAGTGCCAGCGGCATCAGTACCAGTCACCACCACTCCAGCAACAGCGGCTCCGTTGGCCTCGGCAATAGCTGGCCAACGGCATCCGAACGAGGGCGTGCCAGCTGCCAGTGGAGTAATAAACTCCACAATCGCTGAAAACGTAATGAATGCTTTGAGCAACTCCAACTTAGCGGGATCAATGCCCAATGAGGAGAAGATGAGAAGGGTACTGCAGGTGATTGAGGCCAGCTTGGACGAAAATTCGAGGCTGCAGATTTCACAGATCCTAGAGCGTGTCTCGGGACTAAAGCCCATTGAGAAGCTATTCCTCTATCTTCGCTTGCCTGGGGAGTGCGCAGACACTGATCCGTTAAGGCAGCCACAAAATCCGCTGGGAACGCGCTCGGAGATTAACCATACCATAAATTGGGTGCGTTCCCATCTGGAGCACGATGCACAGGTGTCCATACCAAAACAGGATGTGTACAATGATTACATAGCTTATTGTGAACGCCTCAGCATCAAACCTCTGTCCACAGCAGACTTTGGCAAGGTGATGAAGCAGGTATTTCCGGGCGTTCGTCCTCGGAGACTAGGGACGCGTGGAAACTCCCGTTACTGTTATGCGGCGATGCGAAAAACCACCAAGCTGACTCCCCCGCAACTGCCGCAGCTGTGCAAGACTGAGCAGATTTTAGCGGGTGATTCCAATTCTGACCCCAGTCAGATAACTAGTGCCTCCAGTTTGGGTGGCTTTCCATCGACAGGAGGGGACTCTGAGAGCTGGGATGTGGTGCGCAGCTGGGCAGAAAAATTGCTAAACACTAAGCTAGAGAGCGTGGCGGATCTAAGCTCCCGCATCAAAAGCAACAATGCAACAGTTTCTACAAAAAAATACACTCCCCGGGAGCCCAAGGAGAAGCGAGTTTTAGCAGACATTGGGCCTTTAAAAAAGCGACGCAAAAAGAAACGCAAGGGTTCCACATCCTCAGAATCGAGCTGTAATCAATTAGTAACCGGTCAAGACGCGGGTAGCAGCCAGGAGGCCAGCGACGAACAGATTATGAAGATCAAGCAGGAGATCATCGACTCACCCATTCATCCCCAGCAGCATCCATTAGGTTATCTACAGCAGGTAACGCCCATGAACCTAGCCACAGATCAGCGAAGCAGTAGTGCTGTCCGTAACCTCACGCCCAAAATCCTGGAGATGGGCTCGCCGGCCGTAGTACTCACCCAGCAGGAGGTATCCCCCACGGGCATTGTCATAAAGGACGAGGTGGAGGACTACACCTCTAATATATTCTGCAAGAAGGTTTTGAAGGCGCAGCAGACAAAGGGATTCTGGGCGAATTCTCCAAGCAGTGGGACAACGAGCGGAGTTGGTTTATTGGTTCCACCTACGATCACCACAACATCGGCCACACCGCCACCGCCAAGCTCTGGGAATTCCCCAGTTCCGGGTCCCGGACTTTCCATGGGCCCACCCTCACAGATAATGAGCACAAGTTCTGTGAGCCCGTCAAGCAGTGTGGACACCACACCTAAGGTGGCCTCCCGAAACCAAATGATGATTCTGAGAGCCAAGCGTTTAATGGCAGCGGAAAATGCCGCTTTGGCAGCGGCAGAAGACTCAGGACTGCCAGAGAATCTGGGACTGCCCAGAGAGCGAGTGATTAGCATCTGTAACATGGACAAGCACGAGCTGGATGACTACTTTCTACCTGGCGAGGACGAGGAGAACTCCGAGGAGCCCGACAACGAGTTGCTCCAATATTTTCAGATGGGAGACGCTGAGGAAAAACAACTAAATTCCTTAGATGCTGCCGAACAGAACAAGAATCCACAAGAGCCATCGACGATGGGCTCTGTGCCGGAGGCGATGCCCGCCCCCGGACGCGGAGCAGCAGTCGTCGCCGCTGCAGCAGCGATGCTGGCGCCGGTGCCAGCAGCTTCGATGTTGCCCGCACAGGCAGGAGTGGGTTCTGCCTCAGCGTCTCTGGCCCTAATGTCAAAAAAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCTACCCATTTCACCAAACACCAATGGATCAGTGACTACACCCTCAGCCACAGGGTCGTCAAATTCCAGTCAAAATTGCTTCGCTAGTCCCGGCTTGACTAGGATGAAGCAAAGATCCAACTTGTTGAGCAAGCAGCAATCACTTGACTGCGACAACCGGGATCCCATGATAGGGGCTCATCGCAAGGGTCGAGGCTATGTGTACAGCTACCCTACGAGCACGTCTGCCTCAGCTCCACCGAGTCCATCTATTCTTCCACAATGGATGTGTAGAAACTGGTCGCTAGGTGGCGGCAATACATCCAGCTTTGCAGACAGCAGCCACAGTGCTGATAAGCTGGTCAATCAGAACTCAATGGATATGGAGACAAGCCTGGCGCTCACGGGAGAAAATGAATTAGATACGTCGGAGATGCAGCGCTCACAATCGGTGCCATTGTCCCAATTGCAACGAAGAAGCAGCCAACAGTCACCAAGCCTAAACTTCTACTCGGAGAACAGCAACAGTCAGCAATCTGCGTCTCTGAAAGAAACTGGAATACTGTACGAGGAAATGGAAGTAGACTCCCTTCTCTCAGCTAATTTTGCCAGAAAGTTTAATAGCATAACCCAGCAAACGGCCACGACCTGCAGTTCCTCGGCGGGCTCATCTTCCGGCTACAGTAGTGGCGGCTCTGCGGGAATCGTTTCGAGATCAGTGCCCTCAACTCCGCTGCCACATCAACAGCAAAACAGCCTACCATCGTTGAATGGTGGAGGCGGTGCAACGTCCAGCGGGGGATGTGTTGTGGGAATCGGAAATGGAGGCAACTGCGGCGTCGGAAATGGGTTCTTCACTATATCTGACTCGTTTAATTGGGAAGGATCTACGGCCAATAATAGTCATTTGGATTACGCGCACTCATACAGTACCCGCAATTCACTAGACATTTCCAAGTCTATGCCAACAACGCCCATTGCAACTCAACGTTTCCGATATAGTCCGGCGGAGGTGCACCGCGATTTCCTCATAAATGGCAACACCATCGATAGCTTACCTTCGTCTACCTTTGCAGCAGGAGGTGTTCCGACGGGTCCTACGCTGGCCCTGAGCACGGACACCCTCATCGACGACAGTGCTCCGAGCAGTTCCGATGTGGTTGAGGCCATGATTGGTGTCACAGGCATTCTCGACGGTTTTTAG
- Protein Sequence
- MSEKHGQLGAQWTKSAAPAATTAPVSNSIPIPQPIPVALPLQKPNANPYGNCSLQPADIVYGATRFQGTAIHAKASPLTITPVGPGGGTPASAQISPTSHTHVPVPVATPSGFVPPPFTNVASASGGVSTSVLTPNPFATAAGNAAAGLAFANAFNFSTAQQLGLGKIMHAMGGATVGVPAASVPVTTTPATAAPLASAIAGQRHPNEGVPAASGVINSTIAENVMNALSNSNLAGSMPNEEKMRRVLQVIEASLDENSRLQISQILERVSGLKPIEKLFLYLRLPGECADTDPLRQPQNPLGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQLCKTEQILAGDSNSDPSQITSASSLGGFPSTGGDSESWDVVRSWAEKLLNTKLESVADLSSRIKSNNATVSTKKYTPREPKEKRVLADIGPLKKRRKKKRKGSTSSESSCNQLVTGQDAGSSQEASDEQIMKIKQEIIDSPIHPQQHPLGYLQQVTPMNLATDQRSSSAVRNLTPKILEMGSPAVVLTQQEVSPTGIVIKDEVEDYTSNIFCKKVLKAQQTKGFWANSPSSGTTSGVGLLVPPTITTTSATPPPPSSGNSPVPGPGLSMGPPSQIMSTSSVSPSSSVDTTPKVASRNQMMILRAKRLMAAENAALAAAEDSGLPENLGLPRERVISICNMDKHELDDYFLPGEDEENSEEPDNELLQYFQMGDAEEKQLNSLDAAEQNKNPQEPSTMGSVPEAMPAPGRGAAVVAAAAAMLAPVPAASMLPAQAGVGSASASLALMSKKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLPISPNTNGSVTTPSATGSSNSSQNCFASPGLTRMKQRSNLLSKQQSLDCDNRDPMIGAHRKGRGYVYSYPTSTSASAPPSPSILPQWMCRNWSLGGGNTSSFADSSHSADKLVNQNSMDMETSLALTGENELDTSEMQRSQSVPLSQLQRRSSQQSPSLNFYSENSNSQQSASLKETGILYEEMEVDSLLSANFARKFNSITQQTATTCSSSAGSSSGYSSGGSAGIVSRSVPSTPLPHQQQNSLPSLNGGGGATSSGGCVVGIGNGGNCGVGNGFFTISDSFNWEGSTANNSHLDYAHSYSTRNSLDISKSMPTTPIATQRFRYSPAEVHRDFLINGNTIDSLPSSTFAAGGVPTGPTLALSTDTLIDDSAPSSSDVVEAMIGVTGILDGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00592132; iTF_00539401; iTF_00504429; iTF_00596399; iTF_00618898; iTF_00591447; iTF_00605317; iTF_00578267; iTF_00581271; iTF_00536507; iTF_00547804; iTF_00515339; iTF_00494129; iTF_00587881; iTF_00511748; iTF_00529308; iTF_00602326; iTF_00604579; iTF_00505146; iTF_00507358;
- 90% Identity
- iTF_00539401;
- 80% Identity
- -