Basic Information

Insect: Drosophila tanythrix
Gene Symbol: -
Assembly: GCA_035043275.1
Location: JAWNNC010000506.1:3709856-3716757[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.5e-05 0.0018 18.8 2.1 1 23 234 256 234 256 0.97

2 18 8.3e-06 0.00058 20.3 0.4 1 23 262 284 262 284 0.97

3 18 0.0012 0.086 13.5 0.9 1 23 290 312 290 312 0.95

4 18 1.8e-05 0.0012 19.3 3.1 1 23 318 340 318 340 0.97

5 18 4e-05 0.0028 18.1 4.7 1 23 346 368 346 368 0.99

6 18 7.3e-05 0.0051 17.3 5.7 1 23 374 396 374 396 0.97

7 18 3.6e-07 2.5e-05 24.6 4.3 1 23 402 424 402 424 0.98

8 18 1.3e-07 9e-06 26.0 2.4 1 23 430 452 430 452 0.97

9 18 7.5e-05 0.0053 17.3 6.7 1 23 459 481 459 481 0.97

10 18 0.00013 0.0091 16.5 6.5 1 23 487 509 487 509 0.98

11 18 1.2e-05 0.00082 19.8 4.5 1 23 515 537 515 537 0.98

12 18 8.5e-06 0.00059 20.3 8.1 1 23 543 565 543 565 0.98

13 18 6.9e-06 0.00048 20.6 7.6 1 23 571 593 571 593 0.97

14 18 7.7e-07 5.4e-05 23.6 7.7 1 23 599 621 599 621 0.98

15 18 0.00024 0.017 15.7 9.5 1 23 627 650 627 650 0.95

16 18 8.5e-05 0.006 17.1 0.9 1 23 656 678 656 678 0.98

17 18 0.00093 0.065 13.8 3.4 1 23 688 710 688 710 0.97

18 18 1.1e-05 0.00074 20.0 1.6 1 23 716 739 716 739 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.5e-05	0.0018	18.8	2.1	1	23	234	256	234	256	0.97
2	18	8.3e-06	0.00058	20.3	0.4	1	23	262	284	262	284	0.97
3	18	0.0012	0.086	13.5	0.9	1	23	290	312	290	312	0.95
4	18	1.8e-05	0.0012	19.3	3.1	1	23	318	340	318	340	0.97
5	18	4e-05	0.0028	18.1	4.7	1	23	346	368	346	368	0.99
6	18	7.3e-05	0.0051	17.3	5.7	1	23	374	396	374	396	0.97
7	18	3.6e-07	2.5e-05	24.6	4.3	1	23	402	424	402	424	0.98
8	18	1.3e-07	9e-06	26.0	2.4	1	23	430	452	430	452	0.97
9	18	7.5e-05	0.0053	17.3	6.7	1	23	459	481	459	481	0.97
10	18	0.00013	0.0091	16.5	6.5	1	23	487	509	487	509	0.98
11	18	1.2e-05	0.00082	19.8	4.5	1	23	515	537	515	537	0.98
12	18	8.5e-06	0.00059	20.3	8.1	1	23	543	565	543	565	0.98
13	18	6.9e-06	0.00048	20.6	7.6	1	23	571	593	571	593	0.97
14	18	7.7e-07	5.4e-05	23.6	7.7	1	23	599	621	599	621	0.98
15	18	0.00024	0.017	15.7	9.5	1	23	627	650	627	650	0.95
16	18	8.5e-05	0.006	17.1	0.9	1	23	656	678	656	678	0.98
17	18	0.00093	0.065	13.8	3.4	1	23	688	710	688	710	0.97
18	18	1.1e-05	0.00074	20.0	1.6	1	23	716	739	716	739	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACCTTGGGCGGACCGCCGTCATTGTCCGGTGTCAAATCGGCGGAATCTTCGCATAAAGAGGACGGCGGCAAGCAGCCGCCACACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCACAGTTATTTACGTATCACGAGCCAATTGCCACCGCCGCAACTGCCACCGCCGCCCCCCTTACCGCCACAGACGACGCATTCGGCAagcgcagctgcagcagcagcggcggcgtcCACAATAATGCAGCGGTTGCTGCTGTAATGGCCTCGgccaatgcagcagcagcggctgcagcagccgcatcagcagcggcatcagcacaacagcaacaacagcaacaacaacagcaacaacagcaacaacaacagcaacaacagcagcaacaacagcaacaacaacagccagcgACAAGCACAAATGCTGGAAGCCAGCAGGGCAGCGCCACGGTGACAACGACCAGCTCGGGAAGCAACGGGGGTGGGAACGGGGGCAACAACTCAACGACAACGACGGGTGAGTTGCTAATGCCGAAAATGGAGGGAGGCATCCATGGCGTTGATGGTCAGTCGAGCGTTGCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTACGCATGTGTGCGACATTTGTGGCAAGATGTTCCAGTTTCGCTATCAGCTGATTGTGCACCGCCGCTACCATAGCGAGCGCAAGCCGTTCATGTGTCAGGTGTGCGGTCAGGGTTTTACCACATCGCAGGATTTGACCCGTCATGGCAAGATCCACATTGGCGGTCCCATGTTCACGTGCATTGTATGCTTCAATGTGTTTGCCAATAATACGAGTCTGGAGCGCCATATGAAACGGCATTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGgTCAAACACCGCATCAATGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGTCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGTGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCATTTGTTAAATCATGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATATTGCACCAAGACGTTTACGCGCAAGGAGCACCTCACCAATCATGTGCGACAGCATACGGGCGATTCGCCGCACCGCTGCTCCTACTGCAAGAAGACCTTCACCCGCAAGGAGCACCTGACGAATCATGTGCGCCTGCACACGGGGGACTCGCCGCACAAGTGCGAATACTGTCAGAAGACGTTTACGCGCAAGGAGCATCTCAATAATCATATGCGCCAGCACTCCAGCGACAATCCCCATTGTTGCAACGTCTGCAACAAGCCCTTCACACGCAAGGAGCATCTGATCAATCATATGTCACGCTGCCACACCGGCGATCGTCCCTTCACCTGCGAGACTTGCGGCAAATCCTTCCCACTCAAGGGCAATCTGCTGTTCCATCAGCGCAGCCACACCAAGGGGCAAGAGTGCGAGCGTCCATTTGCCTGCGAGAAGTGCCCCaagaatttcatttgcaaagGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCGTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCActcggcgacgacgacgatgcaCACCATACAGCAGATAACAGCAGGCGCCGCAGCGGCGGGTGCCGGGGCCGTCCAGTTAGCGCCGGGCCTGGTGCCGCTGGTCACCAGCTCGCTCATCTCGCACAATGCGCAGCAGtcgcagaagcagcagcaggcggcggcagcagttGCCGCCCAACAgcaggcggcagcagcagccgctgcacaGCAACAGGCGGCCGCTGCGGCGGCAGCCCAGCagcaggcggcggcggcagcagcgcaccagcagcatcagcaacaggtggccgcacaacaacagcaacagcagcagcagcagcaggctgcCGTCGCtgcacatcagcagcagcaacagcaactgcagcagcaacagttgctccaATTGTCCATACAGCAGGCGGCCcaccatcatcagcagcatcagcagcagcagcaacagcagcagcagcagcatcatcaacagcagcaacagtcgcatcCGCAGGCaccgccacagcagcaacagcagcagcagcaacagcagccgccgccaCAGGTGCCGATCGCATTGATAAGTGATCCGAGTGCGCTGGCACGTGCCGccatgcagctgcagcatctgCCCACAAATGTGGAACAGCATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGPPSLSGVKSAESSHKEDGGKQPPHGIEMYKVNIEDISQLFTYHEPIATAATATAAPLTATDDAFGKRSCSSSGGVHNNAAVAAVMASANAAAAAAAAASAAASAQQQQQQQQQQQQQQQQQQQQQQQQQQQPATSTNAGSQQGSATVTTTSSGSNGGGNGGNNSTTTTGELLMPKMEGGIHGVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLAPGLVPLVTSSLISHNAQQSQKQQQAAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAAAAHQQHQQQVAAQQQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQHQQQQQQQQQQHHQQQQQSHPQAPPQQQQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00560429;
80% Identity: -