Basic Information

Gene Symbol
TRERF1
Assembly
GCA_035043275.1
Location
JAWNNC010000522.1:9329609-9344687[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-09 4e-06 27.0 0.1 2 45 1691 1734 1690 1735 0.94

Sequence Information

Coding Sequence
ATGGCTGCCATAAATACGGTATCCAAAAGCATACACCTGCCTCTGACAAATCTCAGCGCTCAGCGTGTGTTGATGTGCAGCGCCTCTCTGGGCAGTGAGGGATCCGTGACACTGCAACTGAGAGATGCGAGTACCTTGGAGACAGCCGATAgtacaacaccaacaccaacaacaacatcgacatcagcaacagcagcagcaacaacaacagcatcacaTCCAATAGCAACATCGTCATTGGGCAACCAAACAAATGGCGTCACAGTGCTTGAGACATCGTCTTCAGCGACGTCAGGAATAACGTCAGCATTAGAGAATGCGCTGACCGTTGGCTATCCGGACCCGGAAATGCTTGCAGATGTTTTAGGCACCATACAGACAGCCTctCTTAAAAACAagcatagcaacaacaataataatagcaacaacaccagcatcaaaagaagcaacaacaacaacaacaagagcagcagcacaacagcGACAATTCTGAACAACTCCGGGATACATCTGAACAGTCCCAATAAAATAACGATAACACGTCGCAGTGCCAGCAACAAGATTAGCGTACAGACTGTGAGCACATCGACGAACACGACGATTAGCAGCATTGGTGGCAGCAAGACCAATTACATTAAGAACTGTCTaatacgcagcagcagctgcagcaacacgGCCACCAATGTCACAACGCTGGCACAGATTCTGagtaacagcagcaccagcagcgcaGCCAGTTTACTCAgtcagcacaacaacaatagcaactgcagcaatagcagcaacttTAGCATCGCATCCTCTGTGGGCAGCATTGGCAGCGTCAGCAGcatcaccagcaacaccagcaacaccagcagcagcagcaattgcagcagcagcaacagcaacgatagcaacagcagcatcggTCAAAGTTTAAGCTTCAAGAGCAATGGTCGAAATGTTGCTGGCATAGTCACTGCGTCAACAACATCCaccagcacagcagcaactggcattggcattgtcaCTGTCGACAACGCGCCCAGAAAGAGCCGCCCCAAGTTATCCTCCCCTACGCGCCACGGACCTCAGCAGTGTCAGATTTGTAGCAAGATCTTTGGAAATGCCTCGGCGTTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATATATTTGTGCGCTTTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACGCATCGCAACAAGAAGCCTTACGAGTGTCGAGCGGATGGCTGTGGCAAATCATATTGCGATGCGCGCTCCCTTCGTCGTCATTCGGAGAATCACCATGGTTGCGTGCCCATCAGCGAATCACTCTCGCCCACGGCCAGCACCCACGGCACCGGCAGCAtcactggcagcagcaacagcaacggcatcGGTGTCGCTACCAGTTCCCTGAGCCTATCGCCGGCCACGGCCAGCGGAGATGCCAGCTCACCAGATGGAGCCACCTGCATTCGCACATATATTTCCACTGGCAGCTCCATTGTGGATGCAGCCACTGGAATTGCGCTGTCCGATGAGCAAATCAGGGCAATGAATTTGCCCATCAAAACGGGTGTTACTCTGCTCTCGCCCACCACATCGACATGCTCGACCACATCGTCCACCGCATCGTCAGTGTCATGCTCGACATCGGGCAATGTCAATGGCAGCTCCGTTGTGGCCAGTTCACCCACCATAACGCTCTGTGATGGCGCAACGCTGGAGGCCGAGGGACTCACACGGGAGCAACTCGATCTCATCAGCAAGATCATGCAGCAGACGAAGCAAACCAGTGCCCAGGTCACAGTCTCCTCGCCCACCAGCGTTAGCTCCTATAAAATCAATACGGAAACGGCCCAGGTCTCGGCGCGACCAAGGACCTGGAACATGCAATTGctCAATAATGTGCAAAACGTGACGCTTACCGTGGACGATGGCACCGAGCTGGTTGCCTCCGCATCAAGCCCACCCGTCGAGGTAAAGGACGATGAGCTgggccagcagcaacagctagtGACCGCCATAAATCCCCACCTGCTCAACATTGTGAAAGTCGATAAGCCAGTTGAGTGTAATCTCTGTCACCGTAAGTTCAAAAATGTACCCGCCCTCAATGGGCATATGCGTCTGCACGGCGGCTACTTCAAAAAGGATCCGGAGACGAAGCGCAGCGAGAAAAAGGACTCCGGCGGACCCCCCCTGCAGACGGCCAGCATTGGAGTGCGCGCCCTCATCGAGGAGAAGATTATAAGCAAGCGCAAGGACATCAATAAGGGTGCCTTTGCAGTTCCTGCACCACCCAGCAGTGCGCCTGAGCCAAGCGCTGCCACCacttgcagcagcaccaccaccacagcaGTGCTGCCCGCTGCGACCACCATTAAGAGCAGCAGTGGTCTAAGCATTCAACAGATTGGCCTACCGCAAAGCATCGAGATCTTCAGCGGTGGGCAGAGACAGCCGAAAACTCTGAGTTTGGGCAGTGGTGCAAACACGATTACGATAACCACCAACAATGTGCctacgacgacgacaatgAGCGCTCTGTCGGCACTGAAGGGCGCCAGCAGCATTGGCAGTGTCTCTGGCAATGCGGATCCCAAGGATTCCACATTGATTGAGCTACTCAAGCGTGGCACGAGGATTGCCGTCACCTCAAAGAAGGCACAAAACACAAGTACAAATCTGCTACTCAGCAATGCGGCCAACGCCGAGCTCATTGGCAACAGTGTCCAGGCAGCGAGTAGTCGTCAGATCATCACCAATAACAATCGCACAGTGATTATACCCTCGGATGTGCATGTCGTCTCCACAAAGTCGAACAAGGTGAGCAGCAATGGAGCAAGCAATGCGAACAGTATCTCCCTGCCGGATGGCACTCCACTCTCGCTGACCATTGGAGGCAATCAAGAGAGCATTGGGCCAAGCAGCATCTCGGGTGGTGTCAATGGTGTTTATGCGGTCACCTACACGACCAATACGGATGCAGTCGATCTATTTGGCAATACCGAGGTGTTTAATGTCTCGGACACTGAAATGCTGTTACAAACTGTGGACACAATGGAGCTGCTGAACAATGAGGAAGAGAATGAGGATGAGGGGCACAAGCAAAGCGAACATTCCGAGAACTTTCCTCTGCTCAGTAATGTTGGGGACGATGTGCTGATCAAGTTGGAGCCAGAGTCGGGCACACCCAGCACCAACACCAATCCTAGTCAGACAACAACGCCGTTGCCCACGTTCCAGCAATTCCATTCCAAGGAGCTCATCATGCAGAACAGCTCACAGATTCAGGCGATTGCCAATATGCGAGGAGGGGTTCTCTCATCACCATTGCATTCGCCACTGGCTTATCCGACACCGCCGTCCAGTCACGAGAATGTTGCCCAATCCTCGCCTTTTATTGAAGATGCTGCCGCTCAGTTTGTGGACGCCAACCACACGTTCTTCGAGGATAAGACGGATTTCTCGCACGTCTACTTCAAGACGGATGACGattgcatgcagcagcagcagctcagtgAGAATGACAATGAGAAGATACTCAAATTGAAGACGGTGCTGGAGGAGAGCGCTTTTGATGCTTCGATCAAGGTGGAGGATCTCTTAAATGGCACAGAGGATGTTGCTGAGTGTGATCTGCGTGAGTTTGCGGAGACTAATTTGTCGTTTCTCGATGAGGATCAGGAGTTCTTAAATGACTCACGCAATGTCACCTCGCCTCTCTCAGAGTCCTTCTTCACCAGTGGCATTGGCTCCGCCGAGGATGTTAAGCAGGTGCTCCGCGAGGTCCTTCCCGATGAGAatatgcaattgcagctgagcagcgagcagctgGCTGAGAATATCATCGATCTCTACTATTTGCCCGGATTGGGCCTGCAATCGCAAATGATGTCCAACTCGGATGATCCGCTCTTGTCCTCTTCTCCCAGAGATTTTGGCCTGCAGCGTCAGGTTGTCCATGCGTCTTCATCGACGGTACCGTCCATGGAGCAGTTGCAGTCTTCCGGGATCATGTTTGcgcaccaacagcaacaattgcagcctcaacagcagcaagaccagcagccacaactgcaacctcagcagcagcaacagttgcagatcggccagcagccgcagcagcagcaacagtcggaCTTTATGCTGTCCAACTTTACGCCCGTATCCTGTCAAACGCAGTATTTGGACGCCAATCAGCAGTCAATGACAATGCAGCCACTCAACAATCTGCTGCAGCCATTACTCTtcggcagcaacaataatggcaataccagcaacaacaacaacaacaacagcatcgaTAAGCAACAAGAGTTTGGAACGCTgctgcaaacaacaaacggaCAAACATCCGCTCTGGATGCTAGCTTGATCTTTGCCTGCGGCGACGGAATCAAAAGTAattccaacaacaataagtcGCTGATTGCCAACTTGCCCGCAGCAGCTCCAGTGGCGACACCAACACCCAGCTTCTCCAATCTGCAACCGTTGTCAAACCAAACGAATTCCATATTAAAGCGTCGCCTGCGCTCAAATGGTGCACAGGATGTGCACAAGTTCTCCAAATTCCATACGCTATCGCCACATCGCTCCAAGCTGCGCAAACCCTCGCGCACCCATTACACTCCGGCGCCAATATTGAATCCGGATCGGAAGGGCACCGGTCTCTATTACAATGTACGCAAGCAGGTTGGTCAAAACATGTTTGATGTCTTTGACGATGATTTTGGTGATCCCGTTGGTCTGGTGGACTTCTCTGATGAGTCCAAGGTAAATCTGGGGTCGACGTATCAGGCGCAGATACCCTCCTGCAAGCCACTCGAAGAGGCTATCAAGGAGACAATGTGCGCGGACATGATGTGGGATCCTAGCGTACAGATCGACGAGAAGATACTGATGCGCTACATAGATCTCAGCAAATCCTCGGCCGTGCCCATGGGCAGCCATTCCGAGGAGGTGGCCCTCCAAGCCCTGCTTGAGGCGAAAGGTAACTCGGCGGCCGCGGTGTTAACTCTTCTGCAGACGCAGTCCAGCGCATTCCAAATGAAATGGACAACCTACGAACTGGAGCAGTTCTTACGCGGCCTGGAAAGACATGGCAAAGACTTTGGCAAAATTGCCAGCGAgCTGCGCACGAAGACATCGGGCGAATGCGTGCAAATGTATTATTTCTGGAAGAAGCTGTGTGTTGATTACAAGGTATCCCACCTGAAAATGGAGCCAGTGCCGCCCAGCACCCCAGTCGTGGAGCAGAAGCCATACGTCTGCGAGATTGCCGACTGCTCGGCGAGCTTCAGCTCGAAGGCGGCGCTGCACGGTCATGTTCGCATACACGCTTATGGTAgaaatgccaacaacagcaacaacagcaacaacaacaacaacaacaaccacaatcaGCATGCCACGGCAATTagtgccaacaacagcaacaacatccacCATAgttccagcaacagcaacaacaacaccaataacaGCAACGCATGCGCGCCCCAGcccagcagcaatagcaatcaGTGCATCagtgcaacaataacagcaacatcaaccgTAGCGCACACAAAtggcagtaacagcaacagcaacaacaccaataccaatgccaatgccaacaacaataacagcaacaacaacaacatcgccAGCAACATCTCCAATGCAACTGGCACTTCCATAAACACAACGTtgctatcagcagcagcagcaacaacatcgacagcaacaaaagacagcaacagcaacaattccAATATTGCAAAGGACACCGAGTTCCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTGAAAAGTCGCAGCGCCCATATGAAAACGCATCGTGTGCAAGAATCAGAACAATCAACCAATTCCAAACAGCAATCGGCCACCAATGCAAATCTGTCTGCTgttgcagtggcagtggcactagcagcagcatcagcatcggcagcatcagcagcatcggcggcatcggcagcagcagcagcatcagcagcgtcTGTGgcatccacagcagcaactgcatcagcatcagcagcacccACTGCAGTTACGGTTACGGCCTCCACCTCGTCGTAG
Protein Sequence
MAAINTVSKSIHLPLTNLSAQRVLMCSASLGSEGSVTLQLRDASTLETADSTTPTPTTTSTSATAAATTTASHPIATSSLGNQTNGVTVLETSSSATSGITSALENALTVGYPDPEMLADVLGTIQTASLKNKHSNNNNNSNNTSIKRSNNNNNKSSSTTATILNNSGIHLNSPNKITITRRSASNKISVQTVSTSTNTTISSIGGSKTNYIKNCLIRSSSCSNTATNVTTLAQILSNSSTSSAASLLSQHNNNSNCSNSSNFSIASSVGSIGSVSSITSNTSNTSSSSNCSSSNSNDSNSSIGQSLSFKSNGRNVAGIVTASTTSTSTAATGIGIVTVDNAPRKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECRADGCGKSYCDARSLRRHSENHHGCVPISESLSPTASTHGTGSITGSSNSNGIGVATSSLSLSPATASGDASSPDGATCIRTYISTGSSIVDAATGIALSDEQIRAMNLPIKTGVTLLSPTTSTCSTTSSTASSVSCSTSGNVNGSSVVASSPTITLCDGATLEAEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTETAQVSARPRTWNMQLLNNVQNVTLTVDDGTELVASASSPPVEVKDDELGQQQQLVTAINPHLLNIVKVDKPVECNLCHRKFKNVPALNGHMRLHGGYFKKDPETKRSEKKDSGGPPLQTASIGVRALIEEKIISKRKDINKGAFAVPAPPSSAPEPSAATTCSSTTTTAVLPAATTIKSSSGLSIQQIGLPQSIEIFSGGQRQPKTLSLGSGANTITITTNNVPTTTTMSALSALKGASSIGSVSGNADPKDSTLIELLKRGTRIAVTSKKAQNTSTNLLLSNAANAELIGNSVQAASSRQIITNNNRTVIIPSDVHVVSTKSNKVSSNGASNANSISLPDGTPLSLTIGGNQESIGPSSISGGVNGVYAVTYTTNTDAVDLFGNTEVFNVSDTEMLLQTVDTMELLNNEEENEDEGHKQSEHSENFPLLSNVGDDVLIKLEPESGTPSTNTNPSQTTTPLPTFQQFHSKELIMQNSSQIQAIANMRGGVLSSPLHSPLAYPTPPSSHENVAQSSPFIEDAAAQFVDANHTFFEDKTDFSHVYFKTDDDCMQQQQLSENDNEKILKLKTVLEESAFDASIKVEDLLNGTEDVAECDLREFAETNLSFLDEDQEFLNDSRNVTSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQLSSEQLAENIIDLYYLPGLGLQSQMMSNSDDPLLSSSPRDFGLQRQVVHASSSTVPSMEQLQSSGIMFAHQQQQLQPQQQQDQQPQLQPQQQQQLQIGQQPQQQQQSDFMLSNFTPVSCQTQYLDANQQSMTMQPLNNLLQPLLFGSNNNGNTSNNNNNNSIDKQQEFGTLLQTTNGQTSALDASLIFACGDGIKSNSNNNKSLIANLPAAAPVATPTPSFSNLQPLSNQTNSILKRRLRSNGAQDVHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYYNVRKQVGQNMFDVFDDDFGDPVGLVDFSDESKVNLGSTYQAQIPSCKPLEEAIKETMCADMMWDPSVQIDEKILMRYIDLSKSSAVPMGSHSEEVALQALLEAKGNSAAAVLTLLQTQSSAFQMKWTTYELEQFLRGLERHGKDFGKIASELRTKTSGECVQMYYFWKKLCVDYKVSHLKMEPVPPSTPVVEQKPYVCEIADCSASFSSKAALHGHVRIHAYGRNANNSNNSNNNNNNNHNQHATAISANNSNNIHHSSSNSNNNTNNSNACAPQPSSNSNQCISATITATSTVAHTNGSNSNSNNTNTNANANNNNSNNNNIASNISNATGTSINTTLLSAAAATTSTATKDSNSNNSNIAKDTEFPCKVCGKVFNKVKSRSAHMKTHRVQESEQSTNSKQQSATNANLSAVAVAVALAAASASAASAASAASAAAAASAASVASTAATASASAAPTAVTVTASTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00485798;
90% Identity
iTF_00593355;
80% Identity
iTF_00607312;