Dtan008677.1
Basic Information
- Insect
- Drosophila tani
- Gene Symbol
- stc_1
- Assembly
- GCA_008042535.1
- Location
- VNJO01008002.1:1-7087[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.2 1.3e+04 -3.4 0.5 15 18 220 223 219 224 0.79 2 15 1.7 1.8e+04 -3.9 1.6 15 19 247 251 246 251 0.81 3 15 0.04 4.4e+02 1.3 2.2 4 11 280 287 279 288 0.91 4 15 4.9e-07 0.0054 17.0 15.1 1 19 292 309 292 309 0.93 5 15 2.3e-05 0.25 11.7 9.0 1 18 345 362 345 363 0.95 6 15 2 2.2e+04 -6.0 3.9 7 13 367 373 367 374 0.75 7 15 2.9e-09 3.2e-05 24.1 13.6 1 19 403 421 403 421 0.98 8 15 8.9e-05 0.97 9.8 16.7 4 19 469 484 462 484 0.88 9 15 0.057 6.2e+02 0.8 11.8 1 11 524 534 524 546 0.79 10 15 4e-10 4.4e-06 26.9 15.5 1 18 551 568 551 569 0.97 11 15 1.4 1.6e+04 -3.6 0.9 6 10 598 602 598 603 0.81 12 15 2 2.2e+04 -9.1 11.9 10 18 616 625 605 626 0.71 13 15 0.96 1e+04 -3.1 0.9 8 13 631 636 630 637 0.78 14 15 5e-08 0.00054 20.2 10.8 1 17 662 678 662 684 0.94 15 15 1.2e-06 0.013 15.8 12.5 1 19 694 713 694 713 0.96
Sequence Information
- Coding Sequence
- TCTTCCAAGCTACAGGCCTCGGCACCCGAATTCGTTCCCAATCTGGCCAAGCTGAGTCTGAACGAAATTCCGGCGGCGACGACGCCAAACGGGAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAATGTGACACAGCCAGGGGGTGGTGGTTTAGGAGGAGTCTCCGAACGAGGAGACCCTCACCACCTTCGCTTAGCCGTTAGCAGTTACGAAAGAGATCGGGGCGACAGGGACTCCCGACCGGGAAGCACCCGCCAGCAGCGTCGCTCCGACTACCGCGATGACCGCGAGGATCGATACGATCGAAGCGATCGCAACGATCGCAAGAAGccccagaagcagcagcgctACGACAATCATCGAAGCAATAAGCGAAGGGATGACTGGAATCGCAACAGGGATCGCATCAATGGCTTCCCAAGGGCCGCCGATGAACTGGACACGAGCAACGAAAGTGCCCAGCCGTCGCCCGAAAAACATCAGAcgacacagcagcagcaaatatCCCCCCGGAGAGCTCTACCGCCTCCACCGGCACCGGATAATGAAAAACTGTCGCAGCGGGAGAAGCTCATACGCGACATCGAGCAGCGGCGGCTGGAGTGTCTGGTGTGCGTGGAGGCGATTAAGGCGCACCAGCCGACGTGGTCTTGCCAAAACTGCTACCACGTTCTCCACCTAAAGTGTACCATTACGTGGGCGAGCAGCTCGAAATCGGATGTCGGATGGCGGTGCCCAGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGCGAGTATCTCTGCTTTTGCGGAAAACTCAAGAACCCTCCGGTGTCCCGCACAGAACTGGCACACAGCTGCGGCGAGGTCTGTTGCCGTATTGAAGGCTGCAGCCACGCTTGCACACTGCTCTGCCACCCGGGCCCCTGTCCGCCGTGCCAGGCCAACGTGGTGCGCAGCTGTGGATGCGGGCGCAGCTCCAAGACCATGCAGTGCGCCATGAAAGAAGATCTTCTGTGCGGCGAGATCTGTGACAAGGTGCTCAACTGTGCCGAGCATCGGTGCCGCGCCGAGTGTCACGCGGGCAAGTGCACAGCCTGCGCGGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAGCAGGAGCGCCATGTGCAGTGCACCCGCGAAAACCAGGACAAGCGAAGCTACTCGTGCAAGGAGAGCTGCGGGAAGCCTCTGCCATGCGGCAACCACAAGTGCAAGGACTCGTGTCACGCAGGCAGCTGCAGGCCTTGTAAGCTGAGTCCAGAACAGATAACTAGCTGTCCGTGCGGCAAGATGCCCGTGCCGGTGGCCCAACGTTCGAGCTGCCTAGATCCCATACCAACATGCGAGGGAATCTGCTCGCGGACGCTGCGCTGCGGAAAGCCCGCTCATCCGCACCAATGCGCCAGCAACTGTCACCTGGGCCAGTGCCCGCCGTGTCCCAAGCAGACGGCCGTGAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCAGGCAGTTGTCCACGCGAGCGGACGACGCCCGCTGCAAGCGGCGCTGCACGAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATAGATCACGCCTGCCCGCTGCCCTGCAACCGGACCCTGAGCTGCGGCAAGCACAAGTGTGATCAGCCCTGCCATCGCGGCAACTGCCCGCCGTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGGGCCGAAGTGATATATCCGCCAGTGCCGTGCGGCACCAAGAAGCCGCTCTGCAAGCGTCCCTGCTCCCGCTCGCATCCCTGCGAGCATCCTCCGCAGCACAACTGCCATTCGGCGGCCACCTGTCCGCCATGCATGATGTTCACCACCAAGTTCTGCCACGGCGGACACGAGCAGCGAAAGACCATTCCCTGCTCGCAGGCCAACTTTAGCTGTGGGCTGGCGTGCGGAAAGCCGTTGCCATGCGGTCGCCACAAGTGCGTCAAGCCGTGTCACGAGGGCGCCTGTCAAAGTGCCGGCGAGATATGCCGTCAGAGCTGCACCAAGCCGCGGGCGATCTGTGGTCACAAATGTGCGGCCGCCTGTCACGAGGGCATCTGTCCCGAGACGCCGTGCAAGGAGGTGGTTGAGGTTCAGTGCGAGTGTGGCCACCGGAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCAGGGAGCACAGTCGCATTGCCACGGCCCAGCTGGCCTCGTCAATGGCGGAGATGTCGCGTGGCAACTACATGGAGCTCAGCGAAATCCTGGCCCCGGCCAAGGCCAGCAAATCAAACCGCACTCTGGACTGCAACGACGAGTGTCGGCTGCTGGAGCGTAATCGTCGCCTGGCTTTTGCCTTGTCATCGGGAAGCGCAGACACGAAGCCAAAATCGCTGACCAAGTACTCGGAGTTTGTTCGTGGTTTTGCGAAGAGGAATCCGGCTCTGACCAAGAGCGTATACGAAACATTAAGCGATCTGGTGAAGCTGGCAAAGGAGAGCAAGCAGCGGTCGCGGAGCCACTCCTTCCCCACAATGAACCGAGAGAAGAGGCAGTTGGTGCACGAGCTGTGCGAAATATTTGGCATTGAATCCGTTTCCTACGACAAGGAGCCCAATAGGAATGTTGTGGCCACCGCCCACAAGGAAAGGTGCTGGCTGCCTGCCACGAGCATCATGGAGGTGCTGGCTC
- Protein Sequence
- SSKLQASAPEFVPNLAKLSLNEIPAATTPNGNRNITASQETAINVTQPGGGGLGGVSERGDPHHLRLAVSSYERDRGDRDSRPGSTRQQRRSDYRDDREDRYDRSDRNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKHQTTQQQQISPRRALPPPPAPDNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCRAECHAGKCTACAEQVEQHCHCGKQERHVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPVAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASNCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCVKPCHEGACQSAGEICRQSCTKPRAICGHKCAAACHEGICPETPCKEVVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKASKSNRTLDCNDECRLLERNRRLAFALSSGSADTKPKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00489062;
- 90% Identity
- iTF_00489062;
- 80% Identity
- -