Basic Information

Insect: Drosophila tani
Gene Symbol: -
Assembly: GCA_008042535.1
Location: VNJO01010218.1:15086-16949[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.22 19 6.2 0.5 6 23 253 270 253 270 0.99

2 9 0.0076 0.66 10.8 1.0 1 23 276 299 276 299 0.97

3 9 5.2e-05 0.0046 17.6 1.8 1 23 307 329 307 329 0.97

4 9 7.9e-07 6.9e-05 23.4 3.3 2 23 336 358 336 358 0.98

5 9 1.3e-05 0.0011 19.5 0.7 1 23 365 388 365 388 0.97

6 9 0.066 5.7 7.9 0.2 2 23 398 419 397 419 0.95

7 9 0.1 8.7 7.3 0.3 2 23 429 450 428 451 0.93

8 9 9.9e-06 0.00086 19.9 3.7 1 23 456 478 456 478 0.98

9 9 0.00012 0.01 16.5 3.7 1 23 484 507 484 507 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.22	19	6.2	0.5	6	23	253	270	253	270	0.99
2	9	0.0076	0.66	10.8	1.0	1	23	276	299	276	299	0.97
3	9	5.2e-05	0.0046	17.6	1.8	1	23	307	329	307	329	0.97
4	9	7.9e-07	6.9e-05	23.4	3.3	2	23	336	358	336	358	0.98
5	9	1.3e-05	0.0011	19.5	0.7	1	23	365	388	365	388	0.97
6	9	0.066	5.7	7.9	0.2	2	23	398	419	397	419	0.95
7	9	0.1	8.7	7.3	0.3	2	23	429	450	428	451	0.93
8	9	9.9e-06	0.00086	19.9	3.7	1	23	456	478	456	478	0.98
9	9	0.00012	0.01	16.5	3.7	1	23	484	507	484	507	0.97

Sequence Information

Coding Sequence: ATGATTTGCCGACTTTGTCTGGACGATGCGGTGCACAGCATCCCGATCTTCGACCAGGAGGAGGCCGACGACCAGCCGCCGCCCTCCAACCTGGCGGAGCTGATTGAGAAGCACCTGCAGTTGGTGCTGCTGCCCAACGATGCTGTGTCCCGGTGCCTGTGCACCCAGTGCTGGCAGCAACTGGCCGACTTTGAGCAATTCTGCTCGATGGTGATGAAGAAGCAGCTGGGCCTGCAGCAGCTCAAGCTAGAGCCCTTCTCTGACGAGGAAGAGGACGCGGACACAAAGGCGCATATCTTGTGCGAGCCAGAGATCGATGTGAGTCCATCGGCGGCGGAGAACGAGGAGTACAATGAGATCGATGTGGATGCcaccagcagtggcagcaccACACACGCTGCAGGGGCACCTGCCGTGACAACGCGGCGCACTAGAGTGCGTCTGCCGTCGCCCATCAGACGCAGCATGCGTCCCCGAGCGCTGCCAAAGGCCAGCAGGGCCGTCGTCAAGGCCGCCAGCAAGGCCAAGACGAAGcgccagctggaggaggcggacgaggatgaggacgcCGAGGGCGATGGTGATGGGGATGCCGAGAGCCGGAGCAGCCACAGCCGCGAAATGGACAGCTACATAGCGTTGCACGGCCGCCTGGAGTGTTGCTTgtgcggcggcgacgacgatcAGTTCCAGAACTTTGCCGAGATGAAGCGGCACTTCCGCAATCATCACCAGTCCGCCGGTTACGTGGTGTGCTGCCAGCGACGCTACAAGAAGCGGGCGCTCTACGTCGACCACCTGCGCATGCACAACGATCCGGACTACTTTAGGTGCAAGATCTGCTCCAAGCAGCTGGTCAGCCGCATCAGCTACGACGTCCACATGCTGCGCTTCCACTCCAACGAGGACGAGCTGAGCTTTGCCTGCGACAAGTGCTCCAAGCGGTTCTCCAAGCAATTCCTGCTCACCATCCACTCGCGGGTGCACCAGCAGGAGCGGAAGGAGCAGTGCAAGCACTGCGACAGATCCTTCCGCACTGCCGTGGACCTGCGCCTGCACATGCGACGCACCCATGATCCCGCCTTTGTGCCCTTCATCTGCGACTCGTGCGGCGCCAAGTTCAAGACGAAACAGAACCTGCTCGTCCACAAGCGCACCGTGCACCGCGAGGGCTCCCAGCTGCCGGAGGTGCAGTGCCAGGAGTGCCAGGTGTGGCTATCCGACGAGAATAGCCTGCGCAAGCACATGTACATGCACCTGGACGCCGCCTCGCTGCGCCAGTGGAAGTGCGAGCAGTGCGGCCTGGAGAAGGGTTCGCGAGCGAAGCTGGCGGCCCACATCCGGTACCACCATCCAAAGGAGTACCACAAGTGCACGCACTGCGGCAAGGAGTTCAAGAGCAGCCGGGGCCTCGAGGAGCACACGGCCACGCACACCGGCCAGGATCTGTACGAGTGCGCCTTCTGCGAGCGCACCTTCAAGAATTCGGGCAACATGCACAAGCACCGCCGCCAGATGCACGCCGCCCAGGTGGCCGCcctccagcagcagaagaaggtGCGTCCCAGCAAGCGCAAGGACAAGGGCGAGCTGATGCTCGGTGTCCTGGCCGCCGGCGGAAAGGACATGATGGATCATGCGATGGGCACCGCCGGCGACATGAACATGAATATGAACATGAACGACTGA
Protein Sequence: MICRLCLDDAVHSIPIFDQEEADDQPPPSNLAELIEKHLQLVLLPNDAVSRCLCTQCWQQLADFEQFCSMVMKKQLGLQQLKLEPFSDEEEDADTKAHILCEPEIDVSPSAAENEEYNEIDVDATSSGSTTHAAGAPAVTTRRTRVRLPSPIRRSMRPRALPKASRAVVKAASKAKTKRQLEEADEDEDAEGDGDGDAESRSSHSREMDSYIALHGRLECCLCGGDDDQFQNFAEMKRHFRNHHQSAGYVVCCQRRYKKRALYVDHLRMHNDPDYFRCKICSKQLVSRISYDVHMLRFHSNEDELSFACDKCSKRFSKQFLLTIHSRVHQQERKEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDSCGAKFKTKQNLLVHKRTVHREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYHHPKEYHKCTHCGKEFKSSRGLEEHTATHTGQDLYECAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVRPSKRKDKGELMLGVLAAGGKDMMDHAMGTAGDMNMNMNMND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00609377;
90% Identity: iTF_00609377;
80% Identity: -