Dtak012364.1
Basic Information
- Insect
- Drosophila takahashii
- Gene Symbol
- bab1
- Assembly
- GCA_018152695.1
- Location
- JAECXN010000121.1:9838150-9840495[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.3e-18 1.4e-14 53.3 0.0 1 43 55 98 55 100 0.95 2 3 4.6 8.9e+03 -3.7 0.7 6 13 216 223 213 225 0.84 3 3 4.2 8.2e+03 -3.6 0.1 4 11 231 238 231 238 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCATGCCTGGATGGGTGCCACCGGATCCACGCTGGCAGCAGACAGCTACCAGTACCAGTTGCAGTCTATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGCGAGCGAGGTCCTTTGAAGTCCTGGCGTCCCGAGACGATGGCCGAAGCTATTTTCAGTGTCCTGAAGGAGGGACTCTCGCTGTCGCAGGCCGCCCGCAAATACGACATCCCGTATCCCACTTTTGTGCTCTATGCGAATAGGGTGCACAACATGCTGGGTCCCTCCATCGACGGCGGCCCGGATCTGCGACCCAAGGGAAGGGGCAGACCGCAGAGAATCCTCCTGGGCATCTGGCCCGATGAGCACATCAAGGGCGTCATCAAGACGGTGGTCTTCCGCGACACCAAGGACATCAAGGACGATAGTTTGGCGGCCCACATGCCGCCCTACGGCCGACATTCGCCCGCGTTTCCCTTGCAGGACATTCCGCTGAGCTATCCCGGCGCAAGTGGCGCCCTGGCAGGAGCGCCCAGCTCGCTGGCCTGTCCGAATGGTAGTGGTCCGCAGGCCGGAGTGGGCGGAGTGGGAGGAGTGGGTGGTGGCGATCAGCACATGTCGCAGGAAACTGCCGCTGCGGTGGCCGCAGTGGCCCACAACATCCGACAGCAGATGCAAATGGCAGCGGCCGTGCAGCATCAGCACGGGGAGGCGGGACCACCGCCCGTTCCGCCGGGAGCGGGCGGAGGCAGGGCCAGCATATCGCCGGCCTTGAGCAGCGGCTCAGGGCCCAGGCATGCGCCTTCGCCATGCGGTCCCGCTGGCCTCCTGCCGAATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATCCGGTGGCTTCGGTGCCAGCTCCAGTTCCTCGGCCTCCTCCTCCTCGCTGGGTCAGCATCATCCCGCCTCCAAGGCCAAGGGCAGTCCGCTGCGCAGCGAAACCCCTCGTCTCCACTCCCCGCTCGGCGATCTCGGCCTGGACATGGCCGGCTACAAGCGGGAGTTCTCGCCCAGTCGTTTGTTCGCCGAGGATCTGGCTGAGTTGGTGGGCGCCAGTGTCTCCTCTTCCTCCTCCTCGGCGGCAACGGGCGCTGTGCCTCCAGAAAGATCAGGGGGAGGCTCCTCCCAGACACCGGGAACCGATGCGCCCAGTTCCTCCAGCAGTGGTGGCATCAAAGTGGAGCCCATTACCACCACTAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLAAHMPPYGRHSPAFPLQDIPLSYPGASGALAGAPSSLACPNGSGPQAGVGGVGGVGGGDQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPPVPPGAGGGRASISPALSSGSGPRHAPSPCGPAGLLPNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSGGFGASSSSSASSSSLGQHHPASKAKGSPLRSETPRLHSPLGDLGLDMAGYKREFSPSRLFAEDLAELVGASVSSSSSSAATGAVPPERSGGGSSQTPGTDAPSSSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00569615;
- 90% Identity
- -
- 80% Identity
- -