Dpav015161.1
Basic Information
- Insect
- Drosophila parvula
- Gene Symbol
- bab1
- Assembly
- GCA_018904695.1
- Location
- JAEIIG010024353.1:219-1869[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-18 1.9e-14 53.1 0.0 1 43 55 98 55 100 0.95 2 2 2.8 6.4e+03 -3.0 0.3 6 12 209 215 202 218 0.73
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCATGCCTGGATGGGTGCCACTGGATCAACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGAACCTGATGCATCACATGCGCTTCCGCGAGCGGGGTCCGCTCAAATCCTGGCGTCCCGAGACCATGGCCGAGGCCATCTTCAGTGTACTGAAGGAGGGCTTGTCCCTGTCGCAGGCTGCCCGCAAATACGATATACCGTATCCCACCTTCGTGCTCTATGCCAATCGAGTGCATAATATGCTGGGACCCTCCATCGATGGCGGTCCGGATCTGCGGCCCAAGGGTCGCGGTAGACCGCAGCGGATCCTCCTGGGCATCTGGCCCGATGAGCACATCAAGGGCGTTATCAAGACGGTGGTTTTTCGCGATGCCAAGGACATAAAAGACGATAGTTTGGGGGCTCATATGCCGCCCTACGGTCGCCACTCGCCCGCGTTTCCTTTGCAGGACCTCCCACTCAGCTATCCGGGCGCTAGTGGCGCCCTCGCCGGGACTCCGAGCTCGCTGGCCTGTCCTAATGGCAGCGGTCCCCAGTCGGGTGTCGGCGGGGAACAGCACATGTCGCAGGAAACGGCCGCAGCGGTGGCTGCCGTGGCCCACAACATCCGGCAGCAGATGCAGATGGCAGCGGCCGTGCAGCATCAGCACGGGGAGGCGGGGCCGCCGCCCGTTCCGCCGGGTCTATTCAACCTGCCGCCCCATCCAGGCGTTGGCGTGGGCGTGGGCGTTGGTTCGGTTTCGGTACCCGGAGCGGGCGGAGGCAGGGCCAGCATATCGCCGGCCTTAAGCAGTGGCTCCGGGCCCAGGCATGCGCCCTCGCCCTGCGGTCCCGCCGGCCTGCTGCCGAATCTGCCGCCCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCTGCCCCACAAGTCCGGTTTCGGTGCCAGTTCCAGTTCCTCCGCATCCTCCTCCTCAATGGTGGGTCAACATCCGGCCAAGGCCAAGGGCAGTCCGCTGCGCAGTGAAACGCCACGGCTGCACTCGCCACTCGGCGATCTTGGCCTGGACATGGCCTACAAGCGAGACTTCTCGCCCAGTCGCCTCTTCGCCGAGGATCTGGCCGAACTGGTCGGTGCCAGCGTCTCATCCTCCTCATCCTCGGCGGCAGCTGGTGCTGGCAGTATGGCTGTCCAGCAGGAGAGATCAGGAGGAGGATCGTCGGCGGCCGCGGGAGCAGATGTGCCCAGCTCCTCGAGCAGCGCCGGGGGCATCAAGGTGGAGCCCATCACCACCACTAGCGAGTAA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDIKDDSLGAHMPPYGRHSPAFPLQDLPLSYPGASGALAGTPSSLACPNGSGPQSGVGGEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPPVPPGLFNLPPHPGVGVGVGVGSVSVPGAGGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPHKSGFGASSSSSASSSSMVGQHPAKAKGSPLRSETPRLHSPLGDLGLDMAYKRDFSPSRLFAEDLAELVGASVSSSSSSAAAGAGSMAVQQERSGGGSSAAAGADVPSSSSSAGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00607718; iTF_00504611; iTF_00609095; iTF_00490002; iTF_00524341; iTF_00475862; iTF_00613430; iTF_00605498;
- 90% Identity
- iTF_00524341;
- 80% Identity
- -