Dsuz014080.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila suzukii
Gene Symbol
ftz-f1
Assembly
GCA_013340165.1
Location
WWNF01000002.1:20546075-20595925[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.17 9.3e+02 -1.2 5.5 40 104 19 83 6 107 0.77
2 5 0.69 3.7e+03 -3.2 6.8 66 188 137 270 115 278 0.54
3 5 3 1.6e+04 -5.4 6.9 39 74 319 354 287 378 0.43
4 5 5.5e-19 3e-15 56.4 0.4 1 76 568 643 568 672 0.74
5 5 2.7e-70 1.4e-66 225.4 1.5 157 408 773 1017 754 1019 0.92

Sequence Information

Coding Sequence
atggatACCTTCAATGTACCTTTGCTGGCggagagcagcagcaacaactatGCAACAGAAGCTACCGGCAATCATCACCACctgcaacatcagcagcagcaacatcagcaacagcaactttTAATAGCACATCATCACAAGGATCAAATGTTGGCCGCTGGCAGTTCTCCAATGCTTCCCTTTTATTCCCACTTGCAGTTGCAACAGAAGGATGCCACTGCAACCATAGGacctgcagcagcaacagttgcatCAGCTGCAACATCGGCGAGTGCCGACAACTTTAGTGCATTGCAAACGATCGATGCCAGTCAATTGGACGGCGGCATTTCCTTGAGCGGCTTGTGCGACCGTTTCTTTGTGGCCAGTCCAAATCCACACAGCAATAGCAATATGACACTCATgggcacagcagcaacaacaaccactaacaataataataacaacaataccaacaacaataataataacaacaacaatgtggAGGCTAAGGCAGTGAGGCCATCGAACGGCAATTCGGTGATCATCGAATCTGTGACGATGCCATCGTTTGCCAATATTCTATTTCCCACCCACCGCAGCGCCACCGAGTGCATTGATCCCGCCCTGCTGCAAAAGAATCCccaaaacagcagcaacagcagcggctCTACTAGCATTATTGTGCCGCCCGTGGAATATCATCAATTGAAACCACTTGAAGTCAATTCCTCGACTTCCGTTTCCACCAGCAATTTCCTGTCCTCCACCACGGCTCAATTGTTGGACTTTGAGGTGCAGGTGGGCAAGGATGACAGTCACATCAGCACCACCACAACGGGGCAGGGATCGGGATCCGGTTCGGGATCGGGGGCAACTACAATAgtagcaacatcagcagcgcCAGTAGCAACGACAACATCCATTAACAACAACACTGCCAATCCAACCAGGAGCTCATTGCACAGCATCGAGGAGCTGGCCGCCAGCTCCTGTGCCCCGAAAACCACGTCGCCCAATAGCAACCACACTAGCAGCGCCAGTACCACACCgcagcaacaccaccagcagcagcaacaccacctGCAAAGCGGCAACCACAGTGGCTCCAATCTCAGCAGCGACGACGAGTCCATGTCCGAGGACGAGTTCGGCCTGGAAATCGACGACAATGGAGGCTACCAGGACACCACCTCCTCGCACTCGCAGCAGAGCGGAGGGGGCGGTgggggcggcggcggcggggGCAACCTGCTCAACGGCAGCTCCGGCGGCAGCTCCGCCGGCGGTGGCTACATGCTGCTCCCCCAGGCGGCCAGTTCCAGtggcggcaacaacaatggcaatcCGAATGGCGGCCACATGTCCTCCGGTTCGgtgggcggcggcggcggcggcggcaatGGGGGCTCgggcggcggaggaggcggtCCGGGCAATCCCATGGGCGGTACGAGCGCCACGCCGGGTCACGGCGGCGAGGTGATCGACTTCAAGCACCTGTTCGAGGAGCTGTGCCCCGTGTGCGGCGACAAGGTGAGCGGCTACCACTACGGCCTGCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAACAAGAAGGTCTACACCTGCGTGGCGGAGCGCTCCTGCCACATCGACAAGACGCAGCGCAAGCGGTGTCCCTACTGCCGCTTCCAGAAGTGCCTCGAGGTCGGCATGAAGCTAGAGGcTGTTCGAGCGGATCGGATGCGGGGTGGACGAAACAAATTCGGACCCATGTACAAACGGGATCGGGCGCGGAAGCTGCAGGTGATGCGGCAGCGGCAGTTGGCGCTGCAGGCGCTGCGCAACTCGATGGGTCCGGACATAAAGCCAACGCCGATCTCGCCGGGCTACCAGCAAGCATATCCAAATATGAACATTAAGCAGGAAATTCAAATACCTCAGGTATCCTCACTCACCCAATCCCCGGATTCGTCGCCCAGCCCCATAGCCATTGCGCTGGGACAGGTGAATGCGAGCACGGGCGGTGTGATAGCCACGCCCATGAACGCCGGCAACGGCGGCAGCGGGGGCGGAGGTCTCAACGGGCCCAGTTCCGTGGGCAACGGCAATagcagcaacggcagcagcggcggcaacaacaccagcagcaCGGGCAACGGAGCGtccggcggcggaggaggggGCAACAACGCGGGCGGCGGGGGAGGAGGCACCAATACCGCCGACGGCCTGCATCGCAACGgcggcaacggcaacagcagtTGCCACGAGGCTGGAATAGGATCTCTGCAAAACACGGCCGACTCGAAACTGTGCTTCGATTCTGGCACACATCCATCGAGCACGGCCGACGCGCTAATCGAGCCATTAAGAGTCTCACCCATGATTCGTGAATTTGTGCAATCGATCGACGATCGGGAATGGCAGACGCAACTGTTTGCCCTGCTGCAGAAGCAAACCTACAACCAAGTGGAGGTGGATCTCTTCGAGCTGATGTGCAAGGTGCTCGACCAGAATTTGTTCTCGCAAGTGGACTGGGCACGGAACACCGTCTTCTTCAAGGATCTGAAGGTCGACGACCAAATGAAGCTGCTGCAGCATTCCTGGTCGGACATGCTGGTTCTGGATCACCTGCACCATCGAATCCACAACGGCCTGCCCGACGAGACGCAACTGAACAATGGCCAGGTCTTCAATCTGATGAGTCTGGGATTGTTGGGTGTGCCCCAGCTGGGCGACTACTTCAACGAGCTGCAGAACAAGCTGCAGGATCTGAAATTCGATATGGGCGACTATGTCTGCATGAAATTCCTAATCCTGTTGAATCCAAatgtACGGGGTATTGTCAACCGGAAGACCGTCTCCGAGGGACATGATAATGTGCAAGCAGCCTTGCTGGACTACACCCTCACCTGCTATCCGTCAGTCAATGACAAGTTCAGTAGGCTGGTAAACATCTTACCGGAAATCCATGCCATGGCCGCCCGCGGCGAGGAGCACCTGTACACCAAGCACTGTGCCGGCAGTGCGCCCACCCAGACGCTGCTCATGGAGATGCTGCACGCCAAGCGCAAGGTGTAG
Protein Sequence
MDTFNVPLLAESSSNNYATEATGNHHHLQHQQQQHQQQQLLIAHHHKDQMLAAGSSPMLPFYSHLQLQQKDATATIGPAAATVASAATSASADNFSALQTIDASQLDGGISLSGLCDRFFVASPNPHSNSNMTLMGTAATTTTNNNNNNNTNNNNNNNNNVEAKAVRPSNGNSVIIESVTMPSFANILFPTHRSATECIDPALLQKNPQNSSNSSGSTSIIVPPVEYHQLKPLEVNSSTSVSTSNFLSSTTAQLLDFEVQVGKDDSHISTTTTGQGSGSGSGSGATTIVATSAAPVATTTSINNNTANPTRSSLHSIEELAASSCAPKTTSPNSNHTSSASTTPQQHHQQQQHHLQSGNHSGSNLSSDDESMSEDEFGLEIDDNGGYQDTTSSHSQQSGGGGGGGGGGGNLLNGSSGGSSAGGGYMLLPQAASSSGGNNNGNPNGGHMSSGSVGGGGGGGNGGSGGGGGGPGNPMGGTSATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKPTPISPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASTGGVIATPMNAGNGGSGGGGLNGPSSVGNGNSSNGSSGGNNTSSTGNGASGGGGGGNNAGGGGGGTNTADGLHRNGGNGNSSCHEAGIGSLQNTADSKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPNVRGIVNRKTVSEGHDNVQAALLDYTLTCYPSVNDKFSRLVNILPEIHAMAARGEEHLYTKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00596709;
90% Identity
iTF_00505434;
80% Identity
iTF_00604898;