Dsuz006732.1
Basic Information
- Insect
- Drosophila suzukii
- Gene Symbol
- dsx
- Assembly
- GCA_013340165.1
- Location
- WWNF01000010.1:4061273-4063605[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-24 6.2e-21 73.9 9.8 2 47 41 86 40 86 0.97 2 2 1.3 4.2e+03 -2.4 0.2 33 44 371 382 370 385 0.71
Sequence Information
- Coding Sequence
- ATGGTTTCGGAGGAGAACTGGAACAGCGACACGATGTCCGACTCGGACATGATCGACTCGAAGAACGACGTGTGCGGGGGTGCCTCCAGCTCCAGCGGGAGTTCCATTTCGCCCAGGACGCCGCCCAACTGCGCCCGCTGCCGCAACCACGGCCTGAAGATCACCCTGAAGGGACACAAGCGGTACTGCAAGTTCCGCTACTGCACTTGCGAGAAGTGCCGCCTGACGGCGGATCGCCAGCGGGTGATGGCCCTGCAAACGGCGCTGAGACGAGCCCAGGCGCAGGACGAGCAGCGGGCGCTGCACATGCACGAGGTGCCGCCTGCGGGAACGGCCACCACAACCCTGCTGGGCCACCACCACCATGCCGCTGCTCCCGCCCACGTCCACGCCCACCATGTGCATGCCCATCACGCCCACGGCCACCACTCGCATCACGGACATGTCCTGCACCACCAGCAGGCCGccgcggcagcagcagccgcagcagcagctccgTCGGCTCCGGCCTCCCATCTTGGGGGCTCCTCCACGGCCGCCTCCAGCCTCCATGGCCATGCCCATGCGCACCACGTCCACATGGCGGCCGCCGCAGCCGCCTCGGTGGcccagcaccagcaccagAGCCACCCACACTCgcacaaccaccaccaccaccagcaccaccacccacatcCGCATCAGCAGGCTCCCCCGCAGCACACCACGCTGCGATCGCCACCGCACAGCGAGCATGGCGGAAGTGTGGGTCcggccagcagcagctccGGCGGAGGAGCGGCCAGTTCCAGCAACGCCGCACCGGCCACCTCGAGCAACGGCTCCAGCAATAGCAATGGagggggaggaggaggaggaggaggtggaggtggaggaggaggaggtggtggagcCAGCTCGGGCGGCGGAGCAGCAGGAGGAAGGTCCTCGGGCACCTCGGTGATCACCAGTGCCGACCATCACATGAGCACGGTGCCAACGCCCGCCCAATCGCTGGAGGGCTCCTGCGACTCGTCCTCGCCCTCGCCATCGTCCACTTCCGGCGCCGCCATTTTGCCGATCTCAGTTTCCGTCAATCGCAAGAATGGCGCCAATGTGCCCTTGGGCCGCAAATGCCGCCGCTGGGAGCAACGAGGACAGATCCATGAAGCCACGCGGCGACGCGGCACGTACTGTGGGCATCTGGGGCAGAGACGCCTCCGACAGAAGGCCTAA
- Protein Sequence
- MVSEENWNSDTMSDSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRALHMHEVPPAGTATTTLLGHHHHAAAPAHVHAHHVHAHHAHGHHSHHGHVLHHQQAAAAAAAAAAAPSAPASHLGGSSTAASSLHGHAHAHHVHMAAAAAASVAQHQHQSHPHSHNHHHHQHHHPHPHQQAPPQHTTLRSPPHSEHGGSVGPASSSSGGGAASSSNAAPATSSNGSSNSNGGGGGGGGGGGGGGGGGGASSGGGAAGGRSSGTSVITSADHHMSTVPTPAQSLEGSCDSSSPSPSSTSGAAILPISVSVNRKNGANVPLGRKCRRWEQRGQIHEATRRRGTYCGHLGQRRLRQKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00591715;
- 90% Identity
- iTF_00605587;
- 80% Identity
- -