Dsuz011129.1
Basic Information
- Insect
- Drosophila suzukii
- Gene Symbol
- Rel
- Assembly
- GCA_013340165.1
- Location
- WWNF01000013.1:1071458-1073683[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-14 5.2e-11 42.7 0.2 1 42 41 82 41 98 0.89 2 3 2.8e-16 1.1e-12 48.1 0.3 100 168 100 169 82 170 0.86 3 3 0.72 2.9e+03 -2.1 0.1 113 163 356 405 346 407 0.75
Sequence Information
- Coding Sequence
- ATGTACATGGATCATCAGTACTATGTGTCCGGCCCGCCGGCTGCAGTGCCTCCGGGCCAGCCCTTTGGCTACCATCAGAACGGCCTGGCATCTGGCGGCGACAGCAAACACGTGCCGCAGCTAAAGATCGTGGAGCAACCGGTGGAGAAGTTCCGGTTTCGGTACAAGAGCGAGATGCACGGCACACACGGATCCCTCAATGGGGCCAATTCGAAGAGGACGCCGAAAACCTTCCAGAGGTCACACTGTGCAACTACGATGGACCCGCCGTCATCCGAAGTACATATTGAGGAGCTCTGCAAGAAGAAGCAGGATCGCCTGGTCTTCCAGATGAACCGCCGCGAGCTGTCCACCAAGCAGCTGCAGGAGCTGCACCAGGAGACGGAGCGGGAAGCCAAGGACATGAACCTGAACCAGGTGCGCCTCTGCTTCGAGGCCTTCAAGATCGAGGACAATGGCGCTTGGGTTCAACTTGCTCCGCCGGTGTACAGTAATGCGATCAATAACCGAAAGTCGGCCCAAACCGGAGATCTGCGAATCGTCCGGCTGAGCAAGCCCACGGGCGGAGTGATGGGTAACGACGAGCTCATCCTGCTAGTGGAGAAGGTCAGCAAGAAGAACATAAAGGTGCGGTTTTtcgaggaggatgaggatggaGAAACCGTGTGGGAGGCGTATGCCAAGTTCCGGGAATCGGATGTTCACCACCAATATGCCATTGTGTGCCAGACGCCTGCGTACAAAGATAAGGACGTCGACCGCGAGGTGAACGTGTCCATAGAGTTGATTCGTCCCTCCGACGACGAGCGATCCTTCCCGCCGCTGCCCTTTCGCTACAAGCCGCGGGACGCTATCGTGTCCAGGAAACGCCGTCGCACCTGCTCCTcggccaacagcagcagttcGGGCAATGTTAGCTCCAACAATTCCCTGGATCTGCCCAAAACCCTGGCCATGGCTCAGCCTCTGAACGGCTTGCCCAACTTTTCGCAACATGATCAGACAATAAGTCAGGAGTTTGGTCGCGAAATGCATCTCGatgatttaataaattccGAAAACTTCCGCAAACTTATTGAAAACAACTCCAACGATCTGGAGAAATCTGAACGCCGAACGCCGTCGGAGTCCTCGCGCCGACAGGTGGAGGAGTTGTTCACAGATCACGCCCTGAAGAACGAGAACAATGATACGTTGCTGCACGAAGTGATCAGCTACAAAAAGGACAACCTGAAGTTGGCCTTTAAGACGATACAGGTGTTGAATTTCTTCAAGCTCAGAGAGCTGGCCAACAGCGCATTGAATGCGGACGGCGACAGTGCGCTGCATGTGGCCTGCCAGCAGGATCGGCCCCACTACATTCGCCCTCTGTTGGGGCTGGGCTGCAGTCCGAATCAACAGAATCATGCCGGAAACACCGCATTGCATTTGGCCGTCAAGGAGGAGAACCTAAACTGCGTGGAGAGTTTCCTGAAAGGAACGCCCCCAATTAGTTCTCTCATTGAGGAATTGGATCTTTCGCTGAAGAACGACGATGGGCTAACACCCTTGCACATGGCAATCAGCAGAACAAGTACGATGTGGCCAAGAAACTGA
- Protein Sequence
- MYMDHQYYVSGPPAAVPPGQPFGYHQNGLASGGDSKHVPQLKIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFQRSHCATTMDPPSSEVHIEELCKKKQDRLVFQMNRRELSTKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVQLAPPVYSNAINNRKSAQTGDLRIVRLSKPTGGVMGNDELILLVEKVSKKNIKVRFFEEDEDGETVWEAYAKFRESDVHHQYAIVCQTPAYKDKDVDREVNVSIELIRPSDDERSFPPLPFRYKPRDAIVSRKRRRTCSSANSSSSGNVSSNNSLDLPKTLAMAQPLNGLPNFSQHDQTISQEFGREMHLDDLINSENFRKLIENNSNDLEKSERRTPSESSRRQVEELFTDHALKNENNDTLLHEVISYKKDNLKLAFKTIQVLNFFKLRELANSALNADGDSALHVACQQDRPHYIRPLLGLGCSPNQQNHAGNTALHLAVKEENLNCVESFLKGTPPISSLIEELDLSLKNDDGLTPLHMAISRTSTMWPRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -