Dsuc003662.1
Basic Information
- Insect
- Drosophila sucinea
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018150745.1
- Location
- JAECWP010000003.1:3772585-3777674[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-121 5.1e-117 390.5 26.1 1 299 79 370 79 371 0.98 2 2 0.053 9.6e+02 -1.2 3.7 210 241 390 420 372 444 0.53
Sequence Information
- Coding Sequence
- ATGGATAGTACAAGCGCCACCGGTCGACGGCGAAACAATACGCGAGTCAATGCCGAGGATAATGCTCTAGATCAAATCACAAAGGAGGTACACGATCATGCGATCGTCGTACCAACTACACCCACAGCACCTTGTCTAATTGACGACAATGATGATGATGACGAACTGTGCGACGACGAGAGTCAATCGGAAGACGAAGTGTTAGTGCAATTCTTGGGCGAGGCAAATCGCATTGCCGAAGCGCGCCTAGCAGCGCGACGTCAAGCTCGGGCCGAAGCACGGGAAATACGTATGCGAGAGCTTGAGCGTCAGCAGAAGGAGCAAGAACAAAATGCCGACCGTGTCTTTGACATGCAAAACACCAGTGGCGGCGTAGACACAATATCTGCCCATCCTGCTCGTCTTGTTTACGGCGGTGGTGGTCTCTTGAATGTAACCCGTGCCACAGCTTCGCGTCGCAGTAGTGAGGATTCATTGGAAGATGAAAGCCGAAGCTTACGGGACATGAAACATGAGCTTAAAGATGTTGAAGAACGCTTCCGAAAAGCAATGATAACGAATGCTCAGCTAGACAATGATCGTGCCTCACAAACATACGAAGTCAAGCTACTCAAGGACAGAAGTGAAACCATGCAGGAGTTGTTGGCTCAGCTTCAACGCGAGTACAAGGAGAAAATGCGCGAATACAATGCGTTGAAACGAAACTTGGATCGCACCACTTTGGAGCTACAACTGGTACAGGGCCAGTTGAATGAGCGCGATTTTTTGATAGCGGAACAGGGTCTTGTGATTGTAGCTATTGAGAATTCCGATGGCAGTGATGCCAAACGGGCTCTAGTCAGTGTTGATAACGCCAATGTCTTAGCCTCCGTGCAGGGTTCGTTAGATGTAAGACTTAAAAAATTAAACGAAGATAAACAGCAGCTTATTGCGGATGTACAGAAGCTCAATGAACAACTGGAAGAGTATAAAAGTGACGGCAAGATAGGCCACGGCAGTTCATCGTACGGAACGTTTGGCTACGACGATGATTATGAGGCTCAGAGAGAAGCAAATAAAATAATTTCGGATTATAAGTATAAACTGCAAAAGTCTGAACAAGAAATTGCGAGTCTACAGGCAAGCTTAGCACGTTCAGAAACTCAGGTTATACGATACAAGAGCACAGCGGAAGCAGCTGAGAAAGCGGAGGCCGAATTAAAAGTGGAGCGGCGCAAACTCCAACGGGAGAACCGGGAAGTTTTAGAGCGATTGGAAGAAGCGGAAACAGCTAATAATCATTTACTGAAACGGCTTGATAAATTAAAAAATGCAAAGAGTGCAATCCTCAAGGACTTATGA
- Protein Sequence
- MDSTSATGRRRNNTRVNAEDNALDQITKEVHDHAIVVPTTPTAPCLIDDNDDDDELCDDESQSEDEVLVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQNTSGGVDTISAHPARLVYGGGGLLNVTRATASRRSSEDSLEDESRSLRDMKHELKDVEERFRKAMITNAQLDNDRASQTYEVKLLKDRSETMQELLAQLQREYKEKMREYNALKRNLDRTTLELQLVQGQLNERDFLIAEQGLVIVAIENSDGSDAKRALVSVDNANVLASVQGSLDVRLKKLNEDKQQLIADVQKLNEQLEEYKSDGKIGHGSSSYGTFGYDDDYEAQREANKIISDYKYKLQKSEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREVLERLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600311;
- 90% Identity
- iTF_00555079;
- 80% Identity
- iTF_00555079;