Dsub003090.1
Basic Information
- Insect
- Drosophila subobscura
- Gene Symbol
- elt-1
- Assembly
- GCA_008121235.1
- Location
- NC:3366170-3373363[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.84 1.8e+03 -1.8 1.9 1 6 312 317 312 333 0.86 2 2 1.8e-17 3.8e-14 51.5 6.9 1 34 363 395 363 397 0.97
Sequence Information
- Coding Sequence
- ATGGCGCCGCGCAATGCAGAGGTGCCAGAGGTGCCGCCAGGTGCGCCACCGGGCACCCTCTACGCCTATTCCTCGGGCCAGATCATCTGCAGCAGCGAGGATGTGGCGGCCATCAAGATAGAGACCATCGAGAAGGGTGAAGTGCCAGTGGAAGCGCAGCAgcaatcccagcagcagcaacaacagcagcaacaattgcagcatcagcagcagcagcagcaacagcagcagcagtgccccACACCCAATGGCGCCACCTATGCGGAGACGATTGTCATCAGTCgtgaggcagaggcactgcagcatcaccaccagcaacatcagcagcagcagcagcagcagcagcaacagcagcagcagcagcaacatccaaCGTCAGCGGTGCACATCGCCAGTAGCTCCCATGGCGGCACCGTGCGATTCGTGTCCGAGGATGGACGCTTCAGCAGCGCCGTTCCGGAAGCGGCTGGCTCCACTCTGTACTACGATGTGCCCGTGGTGGATGCCAGTGTCCATGCCAACGAGTCCAAGACATATGCGGATCTGGGCAACGCCTACGCATTCCCTTCGAGCGCCAGCTTCACGAGCAACAGCTACGCAGCCACGCTGCAGCAGACGAACACGATCTACACGATGCCCGGCGGGCAGTTCCTGACCAAGTCCGAGGCGGGACTGAATTCCCTACGTCAGACGGGACCAACGACCTTTCTGAATCCCTTTCCCGATGGCAGCCAAGCCATCGATCTGTGGACATCGCCCGCACCGCCAGAGTATCAGAATGCACCATTTACCAACTTCCATCCACAGGTGATGGATGAGTATGCCTCGAGTAATATGACCACCACCCATTGGTCACCCGCCGGCAGCATTGGGCAGTACGATGCCAGCCTGGTCACAGCCTCCGCCACATCCTCCCCGAATCACGATCTTAAGTGCGAGAACTGCCACTCGCCGTTCGTGCGCAAGGGCTCGGATTTCTTCTGCCCCAACTGCACGGGTTTCATGCGCATGGCGCCGCGCATGCCCCAGCGACAGGCGAAGCCGAAGACCGCCGCTGCACCCAACAATCGTCGCAATGGCGTCACCTGCGCCAACTGCCAGACCAACTCCACGACGCTGTGGCGGCGCAACAATGAGGGGAATCCCGTGTGCAATGCCTGCGGACTGTACTTTAAGCTGCACAACATGAACCGTCCGCTGTCCATGAAGAAGGAGGGCATCCAGAAGCGGAAGCGCAAGCCAAAGAACAATGGAGGAGCGCCCATGCACCGTGGGGCACCGCTGCCAAGCATGTCCCAAGGTGTCAATCTGATGGTGAACAGCAGCACTCCGCTGTACCCTTCACAGGTGCCCGTGAATATGCTGAATAGCCAGCAGAATGCCAGTCCCGAGCTGCACGACATGTCCACGACAGGACCTGCGGGCGGTGGCGGCTCCCGTGTGGTGGCCATCCAGGTGAATGCCTCGGGTGCACCGCCCAGCTCCGATGGCACGCTGAACATGTCCGCGCGCCACCATGTCACGGGTGAGAGCCACTCGCCGTACAGCCAACAGACGACGCCCTCGCAGAGTCAGTCGCCGCATTTGCCCAGCCCCGTCAGCCTGAATCGCCAGATAGTACAGCCAGTTCCTGCCATTGAGAGCGGTCGCAGTtcgaacaacaacagcgaactCCCGCCGAGCGTCATAACGCGCACTGGACTGCCGGAGCGATCATCGAATAACTAA
- Protein Sequence
- MAPRNAEVPEVPPGAPPGTLYAYSSGQIICSSEDVAAIKIETIEKGEVPVEAQQQSQQQQQQQQQLQHQQQQQQQQQQCPTPNGATYAETIVISREAEALQHHHQQHQQQQQQQQQQQQQQQHPTSAVHIASSSHGGTVRFVSEDGRFSSAVPEAAGSTLYYDVPVVDASVHANESKTYADLGNAYAFPSSASFTSNSYAATLQQTNTIYTMPGGQFLTKSEAGLNSLRQTGPTTFLNPFPDGSQAIDLWTSPAPPEYQNAPFTNFHPQVMDEYASSNMTTTHWSPAGSIGQYDASLVTASATSSPNHDLKCENCHSPFVRKGSDFFCPNCTGFMRMAPRMPQRQAKPKTAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRGAPLPSMSQGVNLMVNSSTPLYPSQVPVNMLNSQQNASPELHDMSTTGPAGGGGSRVVAIQVNASGAPPSSDGTLNMSARHHVTGESHSPYSQQTTPSQSQSPHLPSPVSLNRQIVQPVPAIESGRSSNNNSELPPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00484784;
- 90% Identity
- iTF_00536428;
- 80% Identity
- -