Dlow003691.1
Basic Information
- Insect
- Drosophila lowei
- Gene Symbol
- elt-1
- Assembly
- GCA_008121275.1
- Location
- CM017777.1:5563661-5569831[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.43 1.4e+03 -1.2 0.6 1 6 440 445 440 447 0.87 2 2 1.9e-17 6e-14 51.2 6.9 1 34 490 522 490 524 0.97
Sequence Information
- Coding Sequence
- ATGGTCTGCAAAATTATCTCAACGAATGTCAAGATGCAGCTGAAGCAGATCCAATTGATAGACAAGATCAAGCTAGAGGCCAGCAATGGAGCCGAGCAACTGAGCCAGCAGACAGCCAGCGCCCTGGAGGAgcaacaggaacagcagcagcagcagcaaccagcaacaTCCGTGGGTGCCGTGGTGCAGACGAGTCAGGGAGGAGTCAGCAGTGACCCTGAAGAGCAGTACGTGGTGGTGCCACGCATCCAGCAGAGGCGCATCCTTACCACAGCGGGAACACTAGAACTGAACGAAGCTCGGGAGGGAGAGCCCAGCAGTGGGAGCTCTGGTTCCGCCTCGGAGGGGCACATCGTGTACCAGCGCAGCTCGCACCATTCTCCAGGGTCTGCACACGCGACGCACTACGTCCAGATGGCGCCGCGCAATGCCGAGGTGCCAGAGGTGCCACCAGGTGCGCCACCGGGCACCCTCTATGCCTATCCCTCGGGGCAGATCATCTGCAGCGGCGAGGATGTGACGGCCATCAAGATAGAGACCATCGAGAAGGGCGAGGTGCCCGGggagtcgcagcagcagcaatcccaccagcaacagcagcaacaacaattgcaacatcagcagcagcagcagcagtgtcCCACCCCCAATGGAGCCGCCTATGGGGAGACCATTGTGATCAGtcgagaggcagaggcactgCAGCAtcaccaccagcaacagcagcagcagcatcagcagcagcagcaacatccgGCCTCAGCGGTGCACATCGCCAGCAGTTCCCATGGCGGCACTGTGCGCTTCGTGTCCGAAGATGGGCGCTTCTCCACTGCTGTGCCGGAGGCATCCGGCTCCACGCTGTACTACGATGTGCCCGTGGTGGATGCCAGTGTCCATGCCAACGAGTCCAAGACGTACGCGGACCTGGGCAACGCCTATGCCTTCCCCCCGAGCTCCAGCTTCACGAGCAACAGCTACGCGGCCACCCTGCAGCAGGCGAACACCATCTACACAGTGCCCGGGGGCCAGTTCCTGGCAAAGTCCGAGGCGAGTCTCAACTCCCTGCGGCAGACGGGACCGACGACCTTCCTGAGTCCCTTCCAAGACGGCAGCCAAGCCATCGACCTGTGGACATCGCCCGCTCCGCCAGAGTACCAGAATGCACCATTTACCAACTTCCATCCGCAGGTAATGGACGAGTATGCCTCCAGCAACATGACCACCACCCACTGGTCGCCCGCCGGGGGCATCGGGCAGTACGATGGCAGCCTGGTCACAGCCTCCGCCACATCCTCCCCGAACCACGAGCTCAAGTGCGAGAACTGCCACTCGCCGTTCGTCCGCAAGGGCTCGGAATTCTTCTGCCCCAACTGCAGCTTCATGCGCATGCCCCCACGCATGCCCCAGCGGCAGGCGAAGCCAAAGACCGCTGCGGCACCCAACAATCGCCGGAACGGAGTGACCTGCGCCAACTGCCAGACCAACTCCACGACTCTGTGGCGGCGCAACAACGAGGGCAATCCCGTGTGCAACGCCTGCGGCCTCTACTTCAAGCTGCACAACATGAACCGACCGCTCTCGATGAAGAAGGAGGGCATCCAGAAGCGGAAGCGCAAGCCGAAGAACAATGGCGGAGCGCCCATGCACAGAGGGGCACCACTGCCAAGCATGTCGCAAGGTGTCAATCTGATGGTGAACACCGCCCCTCTGTATCCATCCCAAGTGCCCGTGAATATGCTGCACAGCCAGCAGAACGCCAGTCCCGAGCTGCACGACATGTCCACGACGGGACCGGCCGGCGGATCGCGGGTGGTGGCCATTCAGGTGCAGAATGCCGCGGGTGCAGCGCCCAGTTCCGAGGGGACGCTGAATATGTCCGCCCGCCACCATGTGACCGGAGAGAGCCATTCGCCGTACAGCCAACAGACGACGCCGTCGCAGAGTCAGTCGCCGCATTTACCCAGCCCCGTAACCCTCAATCGCCAGATAGTCCAGCCAGTTCCTGCCATTGAGAGCGGTCGCAGTtcctccaacaacaacaacaacaacaacagcgaacTCCCACCGAGCGTCATAACGCGCACTGGACTGCCGGAGCGATCATCGAATAACTAA
- Protein Sequence
- MVCKIISTNVKMQLKQIQLIDKIKLEASNGAEQLSQQTASALEEQQEQQQQQQPATSVGAVVQTSQGGVSSDPEEQYVVVPRIQQRRILTTAGTLELNEAREGEPSSGSSGSASEGHIVYQRSSHHSPGSAHATHYVQMAPRNAEVPEVPPGAPPGTLYAYPSGQIICSGEDVTAIKIETIEKGEVPGESQQQQSHQQQQQQQLQHQQQQQQCPTPNGAAYGETIVISREAEALQHHHQQQQQQHQQQQQHPASAVHIASSSHGGTVRFVSEDGRFSTAVPEASGSTLYYDVPVVDASVHANESKTYADLGNAYAFPPSSSFTSNSYAATLQQANTIYTVPGGQFLAKSEASLNSLRQTGPTTFLSPFQDGSQAIDLWTSPAPPEYQNAPFTNFHPQVMDEYASSNMTTTHWSPAGGIGQYDGSLVTASATSSPNHELKCENCHSPFVRKGSEFFCPNCSFMRMPPRMPQRQAKPKTAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRGAPLPSMSQGVNLMVNTAPLYPSQVPVNMLHSQQNASPELHDMSTTGPAGGSRVVAIQVQNAAGAAPSSEGTLNMSARHHVTGESHSPYSQQTTPSQSQSPHLPSPVTLNRQIVQPVPAIESGRSSSNNNNNNNSELPPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00518107;
- 90% Identity
- iTF_00601422;
- 80% Identity
- -