Dsub004079.1
Basic Information
- Insect
- Drosophila subobscura
- Gene Symbol
- Rel
- Assembly
- GCA_008121235.1
- Location
- NC:5701552-5705070[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-54 2.4e-50 170.3 0.5 1 168 128 310 128 311 0.95 2 2 0.46 3e+03 -2.4 0.0 122 164 564 606 561 609 0.79
Sequence Information
- Coding Sequence
- ATGAACCATATTTACGATTTGGACAAGGGCAAGAATGTTCTGTGCATGAACGATGCCTCCAACACCAGTGGATATAGCAGCGGAAATTCGACAACATCCACAATGTCGCCAGCACATTCCCCCGAAGCATTGGCGCTGCAAAATGATTTTGCAAATCTGAATCTACCACCAGCGAACTCACCTCAGCCGCCGCCAATGCAGAGTTCACCATACCAGCTGTTTGATATCGAAGCCAGCGCCTCGAATGCCACGAGTTTTGGAAACATGTACATGGACCACCAATACTACGCCCAGTCCGTGGGCGCAACAGCACAGAACTTTGGATACCATCGAAGCAATGGAGTGGTGGCCAAAACGGAACTCGGGCACATGCCCGCTGCCCTGCGCATCGTGGAACAACCTGTGGAAAAGTTTCGCTTCCGATACAAGAGCGAAATGCACGGCACACATGGCTCGCTCAACGGCGCCAACTCGAAGCGCACACCGAAAACGTTTCCCGAGGTGACGCTCTGCAATTACGACGGACCGGCGGTGATACGGTGCAGCCTGTTCCAGACGAACCTCGACAGCCCGCATTCGCATCAGTTGGTGGTGCGCAAGGATGAGCGCGATGTTTGCGACCCGCACGACCTGCACGTGTCCAAGGACCGCGGCTACGTGGCCCAGTTCATCAACATGGGCATCATACACACGGCCAAGAAGTATATTTTCGATGAGCTCTTCAAAAAGAAGCAGGATCGCCTGGTGTTCGAGATGAAGCGTCGCGAGTTGTCCACCAAGGAGGTGCAGAAGCTGCACCAGGAGACAGAGCGCGAGGCCAAGGATATGAATCTGAATCAGGTGCGTCTCTGCTTTGAGGCCTACAAGATTGAGGACAATGGCAATTGGGTGCCCATTGCCACACCCGTCTTCAGCAATGCAATCAACAATCGCAAGTCGGCGCAAACGGGAGAGCTGCGCATTGTGCGGCTGAGCAAACCCACGGGCTCTGTGCTGGGCAACGACGAACTCATCCTTCTCGTGGAGAAGGTCAGCAAGAAGAACATCAAGGTGCGCTTCTTTGAGGAGAACGATGATGGGGAGACCGTGTGGGAGGCGTATGCCAAGTTCCGTGAATCGGATGTCCATCATCAGTATGCCATCGTGTGCCAGACGCCCACCTACAAGGACAAGGAGGTGGACAGGGAGGTGAATGTCTCCATTGAGCTGATACGACCCTCGGACGATGAGCGCTCCTTCCCGCCCCTGCCGTTCCGGTATAAGCCGCGCGACGCCATCGTCTCGCGGAAACGCCGGCGCACATGTTCGATGGCCACCAACAGCAGTTCGGGCAGCAGTGCCCAAAACTCGCTGGATCTGCCCAAgaccctggctctggcccagCCGCAGGCAGTGCCACAGGGACAGCAAGTGCCCATGGGGGAAGCGCCCGTCATGTACCACGATCAGACCATCAGCCAGGAGTTTGGCAGGGACATGGTCCTCGACGACCTGATCCCATCGAAAGACTTCTACCAGCTGATCGACACAAGAACCGAAGAGCTCCTGCCCATGTGCGAGATGCAAAGTTTGGACAGTTTCGGTGGCACGTTGGAGAAAGATGGCCATGGCCGGGCAGCGGAGCGGCCGGCTCCCCCAACGACAGCACCCAACCGCAATTGGACCCCACACTTTTTGAGTGCCATCTTCAAGATCTACGAGGGGCATCGACGGGCGCCAAATGACACCTCGCGAAAGCAGGTGGAGGAGATGTTCACGGAACACGCCCTGCggaacgacaacaacgacacgCTGCTGCACGAGGTGATCATCAGCCAGCGCACGGAGGGACAGCTGACGCAGGCCATCCGAACCATCGAGGTGATGAAATACTTTAAGCTGCACGATCTGGCGAACAACGCACTCAATGCGGATGGGGATAGTGCGCTGCACGTGGCCTGCCAGCATGATCGCGCCTACTACATCCGTCCACTGCTGAGCCTCGGATGTAGTCCGAATCAGCAGAATCATGCGGGAAATACGCCGCTGCATTTGGCTGTGAAGGAGGAGCGAATGGCCTGCATCGATAGCTTCCTAAAgggtggcactggcagtggcaatggagCGCCCACCATTAGGCTCGACCTCTCGCTCAAAAATGACGATGGATTGACGCCACTGCATATGGCCATACGGCAGAATAAGTACGATGTGGCCAAGAAGCTGATCAATCACGATCGCAGCTCCATTAGCGTCGCAAACACAAAGGACGGCAACAATGCCCTGCACATGGCGGTGCTCGAGCAGAGCCATGCACTGATTGTGCTCATTGTGGATGCCCAGGACACTAGCCTTTCGGACATACTCATGTCGCGCAATGCGGCCGGCTATAcgccgctggagctggctCGCTCGAAGGGCGACGAACAGGTGTTACAGCTGCTGGATAAGGTGTATTCGGAGAAGAACGACCCGGCGGCCATGACCTGGATAcccaacaaaatcaaagaggAACTAGACACTTCCTCCGATGAGAGCAGCGAGGCGGCGCTCGAGATCAAAACCGAGGAGATGGACATCAAAACGGAATCCGAAGAAGACAGCCGCGAAAAGGAATTGGCCGGCCATGAAGTGGTTGGCAAAGAGACGGAAGTGGAGACGAGCACAAATCCCAGATACAATCTGCAGCTTTTGTTAAGCAACAAGCAGCGATTCCAGAAGCTAAAGACTCTGCTAAACGAGCCGATTGGCAGCGGACCGGACGCCCAGCAGCCCAAGTGGAAGCACTTGGCGCGCATTTCGCATATGGAACGTTTCAGTTTCTTTTGGATGGACGCCGGGGCCATGCTCGATTACATACAGAACAATGCCAAGTGCATGGAGTACAGCACCTTTGCACTGGCCCTCGAGATGATCGATCCGGATGCATCGGCACTTCTTAATCAGGACTAG
- Protein Sequence
- MNHIYDLDKGKNVLCMNDASNTSGYSSGNSTTSTMSPAHSPEALALQNDFANLNLPPANSPQPPPMQSSPYQLFDIEASASNATSFGNMYMDHQYYAQSVGATAQNFGYHRSNGVVAKTELGHMPAALRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDERDVCDPHDLHVSKDRGYVAQFINMGIIHTAKKYIFDELFKKKQDRLVFEMKRRELSTKEVQKLHQETEREAKDMNLNQVRLCFEAYKIEDNGNWVPIATPVFSNAINNRKSAQTGELRIVRLSKPTGSVLGNDELILLVEKVSKKNIKVRFFEENDDGETVWEAYAKFRESDVHHQYAIVCQTPTYKDKEVDREVNVSIELIRPSDDERSFPPLPFRYKPRDAIVSRKRRRTCSMATNSSSGSSAQNSLDLPKTLALAQPQAVPQGQQVPMGEAPVMYHDQTISQEFGRDMVLDDLIPSKDFYQLIDTRTEELLPMCEMQSLDSFGGTLEKDGHGRAAERPAPPTTAPNRNWTPHFLSAIFKIYEGHRRAPNDTSRKQVEEMFTEHALRNDNNDTLLHEVIISQRTEGQLTQAIRTIEVMKYFKLHDLANNALNADGDSALHVACQHDRAYYIRPLLSLGCSPNQQNHAGNTPLHLAVKEERMACIDSFLKGGTGSGNGAPTIRLDLSLKNDDGLTPLHMAIRQNKYDVAKKLINHDRSSISVANTKDGNNALHMAVLEQSHALIVLIVDAQDTSLSDILMSRNAAGYTPLELARSKGDEQVLQLLDKVYSEKNDPAAMTWIPNKIKEELDTSSDESSEAALEIKTEEMDIKTESEEDSREKELAGHEVVGKETEVETSTNPRYNLQLLLSNKQRFQKLKTLLNEPIGSGPDAQQPKWKHLARISHMERFSFFWMDAGAMLDYIQNNAKCMEYSTFALALEMIDPDASALLNQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517485;
- 90% Identity
- iTF_00514664;
- 80% Identity
- -