Dstu003793.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- -
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000408.1:3686195-3692197[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 6.7 4.7e+02 1.5 0.2 1 23 1377 1399 1377 1399 0.91 2 12 0.00015 0.01 16.1 2.7 2 23 1402 1423 1402 1423 0.97 3 12 9.6e-05 0.0068 16.7 0.9 3 23 1431 1451 1429 1451 0.98 4 12 4.8e-07 3.4e-05 24.0 4.1 2 23 1458 1479 1457 1479 0.97 5 12 4.5 3.2e+02 2.0 0.4 5 23 1492 1510 1490 1510 0.96 6 12 1.1 79 3.9 5.4 3 23 1517 1538 1515 1538 0.93 7 12 0.12 8.4 7.0 0.2 2 23 1549 1569 1548 1569 0.96 8 12 4.6e-05 0.0032 17.8 0.4 1 19 1575 1593 1575 1597 0.95 9 12 2.9e-05 0.002 18.4 0.4 1 23 1605 1627 1605 1627 0.98 10 12 8.6e-05 0.006 16.9 7.6 1 23 1633 1655 1633 1656 0.96 11 12 0.00017 0.012 16.0 5.9 1 23 1661 1683 1661 1683 0.98 12 12 0.024 1.7 9.2 8.2 1 23 1689 1711 1689 1712 0.95
Sequence Information
- Coding Sequence
- ATGGTCGACAGCGTGCAGTGCCCCGTGTGCACATTATATTTGCATGCGGGCATGAATCTATCCGATCATCTGGAGACACATCCCAAGGAGCAGGTTATCAAGGCATTGGTGCAAATGACAATTGTTGGCAATAGCAATAATGGCATGGGTAGTGCTCTGGCGGCGGCTATGCTTGCCACATCTGCTGCTGATAATGCAACCACACCATCGGGATCCGCAACTACAACTGCATCCGCATCAGCATCAGCATCCGCATCATCATCATCCACGATCGTTGATGTAAAACCATCCATAAAAACACTGACAAACACTTTAAATGGATTGTCGTCACAGCCAGCGGTGGTGCCACCACCGCCTCCGCCGTTATCTTCCTCCATTGCTGGCAACACAAACAAAATGAATAATCCACCGATTAAGGCAACACTGAAAAGCGCTCCGCCCATGCCCGCAACCACTTTGACTGAGGCATCAGCCACCAAACCATCTGCACCCACCACCACCACCACCACCGCCAACACCACAATATATCAGCCAACGTTAGCCAATTCAGATTATGGCTTCGAACAACATACTGCTACTCCTCAGCCCTCACAGCAGCAGCAGCAGCAACATGGTTTTGCGCGTGGATCCACTGCCACATTGGTTATACCACAAGTGCCGCAGCAGCATTTCCTGGCCAACCAGCAACAGCAGCAACAACAACAGTCGCTGTTTGCCCATCAGCAGACGCAACCTGGACTAAAATATACCTATGGAAATACCTCGCTGCCAACGCCACCGACATTGCAGATCTTTACGCAGCAACAGCAGGCGGCAACACAGCAAACACAATCACATCAGAAGCCCCCACCCGCCTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCATAACCAAAACAAACAGCAGCAGCATCACCAGCACCAACACCACCAGCACCACCTAAATATGCACCACAATATAAACCTGGCACCACCGACCACTGGAACTGGCAAACAGCAGCAGCAGCAGGCTAATAATAAAGTTCTGACAGAAGTATTTCTAAATCCTCCACCACCACCGCCTCTGCCGTCATCGTCGTCATCGACACTGCCAGTTGGACAGCCACAACATCATCCACATTCACATTCACATCATCATCAACATCATCAACAGCAACAACAACAACAGCAGCAATCCGTTATGCCACGAATGCCAGCTCAGTCATCGATGTCAATGCAATCCCTAACAACGGGTTGTACTTCAGTTACCACCTCATCATCATCATCCTTAGGATCGTCGTCGGTTCGTGTTAGTCGACAAACAAATTCACCATTTGGAGCTCTACTCAATGCAGCTGCTGCAGTTGCCTGCGCCTCATCATCATCTTCGTCCTCATCCGTTTTGCGTTATGCCGAATCACCGGTTGCCCATTATTTGGAAAGGGAAAATGGGGATTTTATAGTTCAAGAAACGCCCAAGCATATTGTTGAGTGCGTGGAGAAGGAAGATGGTGAATTTTCAGAGAATAGTCGTAGTCGAAATCCAAGCAAAACAACGAAAAAGTCACGTAAATCCAAACCCAAAAGAACTCCCAAAGAGCAGCATCAGCAGCGAATATGCAACGAGGAGGAATTCATGAGCTTAAGTAGCGGAGGAGAAAGTGAACCGGAAAAGGAAAAGGATAGACGTGAGCAGAAAATCAAGCAATTGGAAGCGACACAACCGCCGCCACTTTGCACCGCACCATCAACAAGCAATGCAGCGGCAGGAGGGCAAGGATCAGGATCTGGATCAGCTGTAGCTGCAACCGGAGGAGCGACAGCTGCCGGCACTTCGAATTCCACATCCACAAAATCCAAAAAGAATCGTATTACAGTGCTAAGCGATGTGCCACTGAATAGAAATGAATATCTCGATTTAATGGGTAACATTGTGGCCTCCAGTCGCATTGGTCAGGCACGTCCTTTTGCCGCCGTTGCCCCAATACCCCTGGTGAAAGTGGAAAAGGAAGAGCCACTGGATGATGATTATGGTAATGAAAGTGTGCCGGAAATAGTTTCATCCATGCCACAACTGGAGCAAAAGCCCAGTTTGGGCACCACCAGTGTAATCCGTATGGCTAGCACTGCCACCACCACCAACAGCAGCAGCAGCAGTCTTACTACTGCCGAAGATCTCACCCAGCCACCACTAATGAAGATTGAGGTGGAGCCAACAACATTGCTAGCGCCACGCTTCTCGGCACCAGCACCGACCCCGCAACAGCGTGGTCCAAAGAAGTTGGTGATTAAACCAAAGGCCACGACGACGACGACGAAAAAGACTGAGACCCCCATATTAACATCATCGTCATCATCAACTATTAGCACCAATTATTCACCTGCTTCTTCTAGCAAACAAATCATATCAAATGGAAACACCGATGGAGCTATTCCCGCTCCCGTTTTTACCGAGATAGTGCAAATCAAGAGCGAGACTCTGGAGGCTCCTTTATCGTGTAGTAATAGCATATTGGAGAAGCATTTGACCAAGAGGAAACACTCGACAGTCAATGATGATGATGCCCGTGTTCTGCTCGACTTTGCCAATTCCAAACAGTCACCCACTTTGACAGGTGGAGCCACATCCAATACGACATTTGTTGTAAATGCCAATGCCTCCAGTTTTCCCTCGGCTGGATCTGTTTTTGCTAGCAATACAGCAGCAGCGGCAAATCCTAACCAGAATGTTGGCAAACCGGGCGAGGAATATATATTGCCCGATAATAATCTGGACGTGGATGAAATTGTGATATCATCGTCGTCTTCCTATGCCGCCTCATCCGCTTCACAGATGCAGAACCAAGCCCAAATGCAGGCCGCTGGCCATGGTCAAGGTCAAGGACAGTCGGGCACAGCGGCTGGGTCATCATTCAATGACTTTAACTTCCTGTACCATCAGACGGCGGCGGCGGCGACGACAACAACACAGACAACAGGAGCAACTTCCACGGGTAATGCATATTTTACACCCTTCGCCAGGCAGCAGCAGACGCATCATGGTGCCAGTGAGGCTACCAATGCTGCCACTTTGGCCTCATCTTCAAGCAATTCCTCAGCATTGGATCATGATTCAATGAATGCTACTTTCCGTGTTGCCAAGACACAATCCTCGCACTCCTGGTACCATCCAGTACAGCAACAAGCAGCATCAACGACAGCCGGAGCAGGGATAGGCGGTGAAGGTGGCTCACCATCCTCGCATAACAATCACGACTTGGCCCAGCCAACAAATTTCAATGCCGCATTGGCTGCCGTCGAATGCTGCAGTGTGGCTGTGGATGGTGATGTCAAGGCATATTTGGATCTCGATGCCTGCAAACGGGAACAGTTGAGTAATAGCAGCAATTTACCATCGGTTTCCGCATCCACCACATCGTCATCGTTCGCCGGTGCTGGCACTGAGAGCAGTCTGGTTGGTGGACTTAATATACGCACTGATGAAAAAATGCCCGCTAAGGGTGAAATATCCGAACAGGAGAGCAATTGTGACATTGAGAACTCCTGGAGTCAGTCGATGTATGGTGACATATCACAACGTTACTTTAGGAATCAGTTCCCTGGTGTTTATAGTACCGACTGGAGACAAGACTACTATCCGGCACAGGATCTCAGCGCCCAGCAGAGGGAGCACAAGCGCTTTGATTTTAATGCGGTCGACGAGGAGGCATCCTCCCTTTCCAGAAAGAGTTCACCCTTACCCACCGCTTCCACCTCATCATCATCCTCGGCATTGTTGGCTGCTGGACATGATTTAATGCAAGAAGATTCAAAAGATGGCATTATTAAGATCAAACAAGAGCATTGCCAGGATAAGCACGAATCCGATCAGCAGTTACTAGATCATGCTGAATTGGCTGACATGAAAGATGCTGAACTGCTGGGACATGTAACTATCACAGATGGTGGTGATATTAAGCCACCAGGTGTTGGTGGTGCTGGTGGTGATCTGGATGAGAAACCAGCTATAGCGCCACTGGCAATGACAACACCCGCTGCCAAATTGGCAGCTTTATACCGTATGCTGATGGCCTACAACGAATCCAAACTTGGTCAAGAGAGGAGCAGCATTAGCGAATTGGAACAGAAGGCCATGGAAAAATCCATATTTCTGTGCTATGTGTGTCGCACTGATTTCCCTTCCGTCAAGCTGTACGATGCACATCTCACAGAGCATCCGGCCGAGTGTTTCACTTGTGGTAAGAAGTTCTATCGCTGGAAGAACTTTTCACTACATCTTAAACGTCATTTGGGTTGGAAGGAGTTTGGTTGTTGTGTATGCGACAAGAAGTTTGTGGTGCGTAGTGCCCTGGTGGAGCATATGCGTATGCACACTGGTCAGACACCGCTCAAGTGCAAGATTTGCGGTAAAAAGTTCAAACGCTATTCCAATTTAACGCAGCATCGCAAGCGACACACAAAAATGATGGTCCGAAAGAAGGAATATGTATGCCATTGCGGTGAGGTATTGCCCTCCAAGGCCCGGTTTCTTTGGCACAAGGAGACGCACGATCTGAAGCCGAAATGTTGTCCATATTGTTGTGATCGGTTCGTTCATGCCAATTCCCTGCGTCGCCATATACGTTTGGCACATTCGGATAAATTTGATTATGCCGAACCCATGGAATGCCCAATGTGCAAACAGATATTTGCCAAGACCTCCATTAAAGCACATATGGCCACACATTCGACAGATCCGCAATACGATTGCGCCATCTGTAACAAGAGCTTCTCAACCAAATGGAATCTTAAAATCCATTCCTGGGTGCACGCCAATCGCACTGCTAAGCCATTCAAATGCGAATACTGTCCCAAGGCGTTTGTTCGTGAACTGGACTTTAAGAATCACATTAATGCCCATAAACAGATTAAGCCGTATACGTGCGAATATTGTGGTTGTAAGTTTATACGAAAATACAATTATATGAGGCATCGGCGTGAACATCATGGGAACAAAATGTTCACCTGTGATCAGTGTGACAAGTCCTTCCATCGACACTATTATTTGATTGAGCATCGTCGAATTCACACTGGAGAGCGACCCTTCCATTGCACCATATGCGGCAAAAGCTCGACAACAAAAACGAATCACAACAAGCATCTGAAGATCCATCATTCGCGCGATCCCTTCACCGTGGAGGTTTAG
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNSNNGMGSALAAAMLATSAADNATTPSGSATTTASASASASASSSSTIVDVKPSIKTLTNTLNGLSSQPAVVPPPPPPLSSSIAGNTNKMNNPPIKATLKSAPPMPATTLTEASATKPSAPTTTTTTANTTIYQPTLANSDYGFEQHTATPQPSQQQQQQHGFARGSTATLVIPQVPQQHFLANQQQQQQQQSLFAHQQTQPGLKYTYGNTSLPTPPTLQIFTQQQQAATQQTQSHQKPPPAYGAAISQIRSQHNQNKQQQHHQHQHHQHHLNMHHNINLAPPTTGTGKQQQQQANNKVLTEVFLNPPPPPPLPSSSSSTLPVGQPQHHPHSHSHHHQHHQQQQQQQQQSVMPRMPAQSSMSMQSLTTGCTSVTTSSSSSLGSSSVRVSRQTNSPFGALLNAAAAVACASSSSSSSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSENSRSRNPSKTTKKSRKSKPKRTPKEQHQQRICNEEEFMSLSSGGESEPEKEKDRREQKIKQLEATQPPPLCTAPSTSNAAAGGQGSGSGSAVAATGGATAAGTSNSTSTKSKKNRITVLSDVPLNRNEYLDLMGNIVASSRIGQARPFAAVAPIPLVKVEKEEPLDDDYGNESVPEIVSSMPQLEQKPSLGTTSVIRMASTATTTNSSSSSLTTAEDLTQPPLMKIEVEPTTLLAPRFSAPAPTPQQRGPKKLVIKPKATTTTTKKTETPILTSSSSSTISTNYSPASSSKQIISNGNTDGAIPAPVFTEIVQIKSETLEAPLSCSNSILEKHLTKRKHSTVNDDDARVLLDFANSKQSPTLTGGATSNTTFVVNANASSFPSAGSVFASNTAAAANPNQNVGKPGEEYILPDNNLDVDEIVISSSSSYAASSASQMQNQAQMQAAGHGQGQGQSGTAAGSSFNDFNFLYHQTAAAATTTTQTTGATSTGNAYFTPFARQQQTHHGASEATNAATLASSSSNSSALDHDSMNATFRVAKTQSSHSWYHPVQQQAASTTAGAGIGGEGGSPSSHNNHDLAQPTNFNAALAAVECCSVAVDGDVKAYLDLDACKREQLSNSSNLPSVSASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFPGVYSTDWRQDYYPAQDLSAQQREHKRFDFNAVDEEASSLSRKSSPLPTASTSSSSSALLAAGHDLMQEDSKDGIIKIKQEHCQDKHESDQQLLDHAELADMKDAELLGHVTITDGGDIKPPGVGGAGGDLDEKPAIAPLAMTTPAAKLAALYRMLMAYNESKLGQERSSISELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKMFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00556098;
- 90% Identity
- -
- 80% Identity
- -