Dstu013635.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- -
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000688.1:5738880-5740549[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-13 2.7e-10 39.7 0.0 3 45 366 408 364 408 0.97 2 3 0.022 41 3.9 0.0 27 37 437 447 436 452 0.89 3 3 9.7e-19 1.8e-15 56.3 0.0 2 41 474 513 473 516 0.94
Sequence Information
- Coding Sequence
- ATGAACAATCTAAAATGGATGGGGCATTCGGCCACAATAATGGACATTCAGCGTTCGCTTCAAAACGACGACGAATCGTGTGAAGTTATCCTGGCAGCTAAAGATGGGACGAGTGTGCGCGCACACCTTTTCGTTCTCAGCACATGCAGTGATCTAATGCGAAATCTATTGATGGATTTACCACCAGGCCAGGAGGCAACCATAATTTTACCCGATATTCGTGGAGATCTGCTGGAGAGTATGCTCTCGTTTATTTACGTGGGTGAGACAAGCTTGCCTTCGGCCTCGCTGACTGAATTTGTAGAGGCTATAAATCTACTGGGCATTAAGTCGGCAATAAGTTTTGAATGCAACCCCACTTCTCTTAGCGGTTCTAATGTCGACACTGTTGCCGAAGACACCTTGGCTGTGGAGACTGCCAAATCAATCGGTGACTTACAAATAGAACATGCTGAATTGTTAGATGAAGATGATGACGGTTTGTCACAAGGACATGGTTCTGGTGATGCTGGGGGAAATCCACTTCTGGGTGATCCTCAAGAACAACAACAACCTGCTCAGAGTAGCCGTTCCCTCGAGTATCTCGATGTTTACAGCGATCAGCCGAAGATTACCTATTCCATCGATCAGCCGAAGATTACCTATTCCATTGAACATATGAGCGGCACTTCCAGTGGCAATCAGTACATTCTAACCGAGAAAACAGGCACCTTCACAATTTCCCAATCAGCTGCATCCATTTCTAAATTAGATGCTTCCAATGTAGAAATAGCCGATGATGATGTGGAAGCCAATTGCAAAGACGAAGTCGAAGAGCAGGAATCACACATGATTGAAGAGGAATATGTGGCAGCGGATCCATTGATTAGTTTGGCAATTGGCACAGATGCGGAAATGGGCGAAGCTGATGGCGATCATGATGGTGAAGGTGACGAAGACGATGGCGATGTAGATGATGTCATGGAAATGCAAGTGAAATCTAATCCCACCAAAACAAAAGGACGTCGCGGTGTAACACCAAAAGTGAAACGACCTGCCGCCAAACAGCAACAGAAATACAGTGCCCTTAAGAATGATACTAAAGATGGCATAACCGATGCTCTGGAACTCGCCGCTGATGCAGTACTCCGTCTCCGTCTTAGTCTACAGAAGGCAGCTGATCGGTTCGACATATCAAAAACCGTTTTATGGCGTCGCGTGCGCCATAGTCCTGAATACATGCGTAGCAATCGAGAGAAACCCTCGTTATCAGAGGCATACGAACGCCTTAAAAACGGTGATTCGCTAAAGAGTATTAGCCATGATTTAAATATACCTATGTCGACGCTACATCGTCACAAGGTGCGACTGGCGGCCCAGGGACGTTTGCCTGACTTTGTCGCCTGCCGCCGTCGTGATACCACACCTAAAGATGAGTTGCGCGACAAGCTTGCGAAAGCCGTGCACGCCTGCACTCAGGAAGGTATGTCACAGAATCATGCAGCGAATCTATTTGAGATACCCAAGAGCACGCTCTGGCGTCACCTACAACGCCATACAGCTGAAAGGGAGCGTAAAGTAAAATTGGAGCAACAGGATGAAGATGATGAGGATCTTCTTACCTAG
- Protein Sequence
- MNNLKWMGHSATIMDIQRSLQNDDESCEVILAAKDGTSVRAHLFVLSTCSDLMRNLLMDLPPGQEATIILPDIRGDLLESMLSFIYVGETSLPSASLTEFVEAINLLGIKSAISFECNPTSLSGSNVDTVAEDTLAVETAKSIGDLQIEHAELLDEDDDGLSQGHGSGDAGGNPLLGDPQEQQQPAQSSRSLEYLDVYSDQPKITYSIDQPKITYSIEHMSGTSSGNQYILTEKTGTFTISQSAASISKLDASNVEIADDDVEANCKDEVEEQESHMIEEEYVAADPLISLAIGTDAEMGEADGDHDGEGDEDDGDVDDVMEMQVKSNPTKTKGRRGVTPKVKRPAAKQQQKYSALKNDTKDGITDALELAADAVLRLRLSLQKAADRFDISKTVLWRRVRHSPEYMRSNREKPSLSEAYERLKNGDSLKSISHDLNIPMSTLHRHKVRLAAQGRLPDFVACRRRDTTPKDELRDKLAKAVHACTQEGMSQNHAANLFEIPKSTLWRHLQRHTAERERKVKLEQQDEDDEDLLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555765;
- 90% Identity
- iTF_00577699;
- 80% Identity
- iTF_00600426;