Dstu007891.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- -
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000317.1:11035419-11042475[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.8e-12 1.5e-08 34.2 0.0 1 40 456 496 456 499 0.90 2 4 2.9e-13 5.5e-10 38.7 0.1 2 39 511 548 510 551 0.94 3 4 1.8e-16 3.4e-13 49.0 0.0 1 45 565 610 565 610 0.98 4 4 1e-19 1.9e-16 59.4 0.0 1 43 617 660 617 661 0.97
Sequence Information
- Coding Sequence
- ATGGGCAGGGCTGAAACTTCGACTGGCATGGAGAGTGGGACTGGGAAGAGTACCGGAGGTGAGGGTGGGTCCAGAGATTGCCCCACTCCTCATTTGTTAGTAGCGAGCGCGAACATCTCATTCCGTTGCCCATTTGCCAACTGGGCTGGTTTGCTGCGCACCGCCGAGCAATTGAAAATCAAAGGTCTCTGTGAGACAGCTGAAAATGCAGACGATTTAAATGATGCAGCAACCGCTACTATAACGGTCGCCGCCTTTGGCAATACTGACAACCCATTGAGCGGGCAATTGCTTAGCTCGAGCAGTTCAGTGAATGGTGAGCCAGCATCACGGAAAAGTCGTTCGAAACGCTCAAAGTCGCCAGACTTACAACAGCAACAGGAACATCATCAGCAACAGCAAACAATTTTGATTCAAGGCCAAAATCAAACATCCATTGTGAGTTTGCATCAGACTGTGGACGGCAATTATATACCCGTGAGTGCCGCAGGGCCAGGTGAAGAATCGGACGTGGATAACGATCAGGAACTAGATCACGTGCATGAGCACGAGCACGACGAGGAAGTGCATGAAAGTAAACCAAATAAAATTTGTAAAACAGAGGAATCCCTGGTTTCACCCACATCGAATTCGTCCAATAATCCGACACACCATCAAAATGCTGTGGCGCCACCTGGAGGCGTGAGCGGCACTGGCAACGGCAGCAGCGGCATACCAACAACAGCAGCAGGCGGCCAAACAGCTATCGTAACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAATGGCGGCCTATTGGGCGTACCCATGGGTTTTTTGGACTTTACACCCGAGCCACCAGCACCATCTGCCACACCAGTCACCGTAACGGAACACGTCGATCTCTCCTGTAATCCCAGCACAGATACGCGAGATCTATCAAATCCCACCGAACCTCTTGACATTGACAATCATTTGGCGCAACAAATTCATCGACTCGATCAATCTCCAATGCATTCAATATCCCATCATCATACTGGAGATGAGAGTAACTCGAATTTGGTGCAAGTTCAGCACATTAAAAGTGAACATGAGCCAGGCATGATAATAACGCCTGAGATTGTCAATATGATGTCATCCGGTCATATGGATATGTATAATTCTGATACCAGCGAAGATTCCATGATGATTGCTAATGGCTCACCACACGATCAAAAGGAGCCGCACTATACGAATTTGGATCAAAAACATGGAATCCTTGGCGGCGGCAGCATTTGCGGCCCGGGTGGTGCTGGTGGTGGTAGTGGTGGTGTTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGTATCGAAACGCCCAAGAAGGAGGGTGGCACAAAATCGTGGAACGAGGATGCTTTACAAAACGCCTTGGAGGCACTACGAGCGGGTCAGATATCCGCAAATAAGGCATCAAAAGCCTTTGGAATACCCTCATCGACCTTGTACAAAATAGCCCGACGCGAGGGCATCAGATTGGCAGCACCTTTTAATGCCGCTCCAACCACATGGACACCGGAGGATTTGGAGCGCGCATTAGTGGCAATAAGAGCGGGTAATACGTCGGTGCAAAAAGCAAGTGCTGAATTCGGCATACCCACAGGCACACTTTATGGACGATGCAAACGTGAAGGCATTGAGCTCTCGCGATCAAATCCTACACCATGGTCTGAAGATGCCATGAATGAGGCCCTGAACTCGGTTCGTGTCGGTCAAATGTCCATCAATCAAGCGGCCATTCATTATAACCTGCCCTATAGCTCACTCTATGGGCGTTTTAAACGTGGCAAATACGATGTTGTAACTAATACTAGCGGAGTCTCGCTATTGAATACCTCAGGCAATACTACTGGAAGCATTGAGATTATTGAACATAGTCAGGAAAATTCGTTGCATATGTTGCAGCAACAGTTTCCGTACAGTCCGTCACCGCATCCGCCAACGCCACAGCATCATAGCACACCGCAACAGCATCACAGCAGCTCCCAGCAAGGGCCGCCAACGCCGCAGCATATGCAGCAGCAGCATGTGGTTCATATGCAGCAACAGTCACCACATCAGGGACATCATCAGCATATGCAACAGGATGTGGTTACCTCAAGCAGCCAAGTGGAATTAGCAGTACAGCTTTTGCCAGCATATCAGCATTGGTTAGCGGTGGACCAACTGGACAATAAAAGAAAGAAAGCAACCAAACAAAAGCGTTGA
- Protein Sequence
- MGRAETSTGMESGTGKSTGGEGGSRDCPTPHLLVASANISFRCPFANWAGLLRTAEQLKIKGLCETAENADDLNDAATATITVAAFGNTDNPLSGQLLSSSSSVNGEPASRKSRSKRSKSPDLQQQQEHHQQQQTILIQGQNQTSIVSLHQTVDGNYIPVSAAGPGEESDVDNDQELDHVHEHEHDEEVHESKPNKICKTEESLVSPTSNSSNNPTHHQNAVAPPGGVSGTGNGSSGIPTTAAGGQTAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQVQHIKSEHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQKHGILGGGSICGPGGAGGGSGGVAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRAGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALVAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVTNTSGVSLLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQQHHSSSQQGPPTPQHMQQQHVVHMQQQSPHQGHHQHMQQDVVTSSSQVELAVQLLPAYQHWLAVDQLDNKRKKATKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00604006;
- 90% Identity
- -
- 80% Identity
- -