Basic Information

Insect: Drosophila stalkeri
Gene Symbol: stc
Assembly: GCA_035047405.1
Location: JAWNPR010000039.1:19272965-19276437[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.4 1.4e+04 -3.7 0.5 15 18 368 371 367 372 0.79

2 14 2 1.9e+04 -4.1 1.6 15 19 395 399 394 399 0.81

3 14 0.057 5.4e+02 0.8 2.0 4 11 428 435 427 436 0.90

4 14 5.9e-07 0.0056 16.8 15.1 1 19 440 457 440 457 0.93

5 14 2.3e-08 0.00021 21.3 13.6 1 18 493 510 493 511 0.98

6 14 1.7 1.6e+04 -3.9 1.5 7 13 515 521 515 522 0.75

7 14 2e-09 1.9e-05 24.6 12.9 1 19 551 569 551 569 0.98

8 14 3e-05 0.28 11.3 16.9 4 19 617 632 610 632 0.88

9 14 0.062 5.9e+02 0.7 11.7 1 11 672 682 672 694 0.79

10 14 2.8e-10 2.7e-06 27.4 15.1 1 18 699 716 699 717 0.97

11 14 2 1.9e+04 -4.4 1.2 6 10 746 750 746 750 0.88

12 14 2 1.9e+04 -7.1 9.2 10 18 764 773 754 774 0.77

13 14 1.2e-07 0.0012 18.9 14.1 1 16 810 825 810 835 0.94

14 14 1.1e-07 0.001 19.1 13.7 1 19 842 861 842 861 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.4	1.4e+04	-3.7	0.5	15	18	368	371	367	372	0.79
2	14	2	1.9e+04	-4.1	1.6	15	19	395	399	394	399	0.81
3	14	0.057	5.4e+02	0.8	2.0	4	11	428	435	427	436	0.90
4	14	5.9e-07	0.0056	16.8	15.1	1	19	440	457	440	457	0.93
5	14	2.3e-08	0.00021	21.3	13.6	1	18	493	510	493	511	0.98
6	14	1.7	1.6e+04	-3.9	1.5	7	13	515	521	515	522	0.75
7	14	2e-09	1.9e-05	24.6	12.9	1	19	551	569	551	569	0.98
8	14	3e-05	0.28	11.3	16.9	4	19	617	632	610	632	0.88
9	14	0.062	5.9e+02	0.7	11.7	1	11	672	682	672	694	0.79
10	14	2.8e-10	2.7e-06	27.4	15.1	1	18	699	716	699	717	0.97
11	14	2	1.9e+04	-4.4	1.2	6	10	746	750	746	750	0.88
12	14	2	1.9e+04	-7.1	9.2	10	18	764	773	754	774	0.77
13	14	1.2e-07	0.0012	18.9	14.1	1	16	810	825	810	835	0.94
14	14	1.1e-07	0.001	19.1	13.7	1	19	842	861	842	861	0.96

Sequence Information

Coding Sequence: ATGGCCGAgtattggcagcagcagcagcagcaacagcaacatcagcagcagtcgcagctgccccagctgcagcagcagcaacaacaaccacaacaattACAGTTAACAAATGGCGCTGGAGATTCAGCCAATGGccaaactaataataataattatgtaaattttaatcaatttatcagTCAACACAATTTGGCCAGCTCTGCCTATAATGTTGGCGGCGGCGCTTTTGGCCTAacgcccagcagcagcgccagcagcggcTCCAATTTATATGCTCCACACTTTTATGGCAATCAAAATGGCGACTGTTACAATACAGCTGGCGCAGCTGTTGCCTATCCAGTTGGCTATACCAATCCCTATACAACATTTGGCTCAAATCCATTTGCTGCGTCTGCTGCGTCCTCGGCTGGTTACGATTTCAGCGCTTCCAAGCTGCAGGCAACAGCGCCCGAATTTGTGCCCAATTTTGCTAAGCTGAGTTTAAcagcaccatcagcagcagcagcagcagcagcagcaacaactgtaacagcaacaacaccaacaacagagAATGCCACTGTTAAAAatcataacaacaataacaacaacaacactgccATACAAGCAAAtggaatagcagcagcagcagcaacagcatcgacTCCAAATTCAGCTCAGCAACCACAGCGATCAGAGCAGAGACAATCGAAGAGTcatggcggcggcagcggtaGCGGCAACAACAGTCGCCAGCAGCGACGCCACGATTATCGTGAGGAGCGCAATGAGGAGCGCTATGAGCGTGGCAAGAAACCGCAGAAGCAACAACGTTACGATAATCATCGCAGCAATAAGCGACGCGATGATTGGAATCGAAATCGTGATCGCATCAATGGCTATCCACGCGCTGCCGAGGAGCTGGACACCAGCAATAGCAATGACAGTGCCCAAACCTCGCCcgagaagcaacagcagcagcaacaaatttcgCCCAGACGTGCACCGGATCTGGAGAAATTGTCACAGCGCGAGAAGCTAATGCGTGACATTGAGCAGCGTCGGCTTGAGTGTCTCGTCTGTGTGGAGTTGATTAAGGCGCATCATGGCACCTGGTCGTGCCAGAACTGTTATCATGTGCTGCATCTGAAGTGCACCATCACCTGGGCGAGCAGCTCCAAGTCGAACGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGCTCAAGAATCCGCCATTGAGTCGCAACGAGCTGGCCCACAGCTGTGGCGAGCTCTGCTGCCGTGTCGAGGGCTGTAGCCATGCCTGCACGCTGCTCTGCCATCCAGGTCCTTGTCCGCCATGCCAGGCGAATGTGAATCGTAGCTGCGGCTGTGGACGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGACGCCATTTGCGACAAGCTGCTCAACTGCGGCGAGCATCGCTGCCAGCAGCCCTGCCATGCTGGCAAGTGTGAGGCATGCGCGGAGCAAGTGCAGCAGAACTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCTGTGCACCCGGGAGACGCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGCGGAAAGCCACTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGTCGCCCCTGCAAACTGAGTCCCACCCAAATCACCAGCTGCCCATGTGGAAAGTTACCCGTGCCGGCGTCACAGCGCATCAGCTGCCTCGATCCGGTGCCCACGTGCGAGGGCACCTGCAACAAGACACTGCGCTGCGGCAAGCCAGCGCATCCGCATCAGTGCGCCAACAAGTGTCACCTGGGCCAGTGCCCGCCCTGTCCCAAGCAGACGGCTGTGAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGTCAGCTATCGACGCGAGCGGACGATGCGCGCTGCAAACGCCGCTGCACCAAGAAGCGCAGCTGTGGCAAACACAAGTGCAATGCCGAGTGCTGCATCGATATCGATCATGCCTGTCCATTGCCCTGCAATCGAACCCTGAGCTGCGGTCGGCACAAATGCGATCAGCCCTGCCATCGTGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAACTGTACTGTGAGTGTGGCGCCGAGGTCATCTATCCGCCGGTGCCCTGCGGCACCAAGAAGCCCGTCTGCAAGCGCCCCTGTTCGCGCACCCACGGCTGCGAGCATGCGCCGCAGCACAATTGCCATGCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAATGGTGTCATGGAAATCATGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTCAGTTGTGGCATGGCCTGTGGCAAGCCGCTGTTCTGTGGCCGTCACAAATGCATTCGTCCGTGCCACGAGGGCGAGTGCCAGCAGGCGGGTGAACTGTGCCGCCAGAGCTGCACCAAGCCGCGTCCGCTATGCGGCCACAAATGTGCCGCCGTCTGTCACGAGGGTGAATGCCCGGAGACACCGTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAATCGCAGCTGCCAGGAGCTGGCCCGAGAGCATAGTCGCATTGCCACCGCACAGCTGGCATCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAGATTCTGGCGcccaacaagaacaacaagtcCAACAAAACCTTGGACTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGTCGCTTGGCCATTGGCCTGCAGTCACGCAATCCGGATGCACAGCTAAAGTCGTTGACCAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAGCGCAATCCGACTCTAACCAAGAGCGTCTATGAAACGCTCAGTGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGCGTAGTCACTCCTTTCCCACCATGAATCGTGAAAAGCGTCAGCTGGTGCATGAGCTGTGCGAGGTGTTTGGCGTGGAGTCCGTGTCCTATGACAAGGAGCCCAATCGCAATGTCGTTGCCACGGCACACAAGGAACGCTGCTGGCTGCCCGCTACGAGCATTATGGAGGTGCTGGCACGTGAATCCGGGCAACGTCGCGTTCCAGTGCCCAGCAACAATGCGTGGGGACTCAAGaagtaa
Protein Sequence: MAEYWQQQQQQQQHQQQSQLPQLQQQQQQPQQLQLTNGAGDSANGQTNNNNYVNFNQFISQHNLASSAYNVGGGAFGLTPSSSASSGSNLYAPHFYGNQNGDCYNTAGAAVAYPVGYTNPYTTFGSNPFAASAASSAGYDFSASKLQATAPEFVPNFAKLSLTAPSAAAAAAAATTVTATTPTTENATVKNHNNNNNNNTAIQANGIAAAAATASTPNSAQQPQRSEQRQSKSHGGGSGSGNNSRQQRRHDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQQQQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQELPREYLCFCGKLKNPPLSRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTSKLMQCAMKQPLQCDAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQNCHCGKQQREVLCTRETQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPASQRISCLDPVPTCEGTCNKTLRCGKPAHPHQCANKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGMACGKPLFCGRHKCIRPCHEGECQQAGELCRQSCTKPRPLCGHKCAAVCHEGECPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPDAQLKSLTKYSEFLRGFAKRNPTLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00549946;
80% Identity: -