Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_018904355.1
Location
JAEIFY010000032.1:3420032-3431674[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-10 3.2e-07 29.7 0.0 2 44 265 308 264 309 0.88
2 3 1.1 2.3e+03 -1.9 0.3 1 11 401 411 401 418 0.84
3 3 5.1e-19 1.1e-15 56.8 0.0 1 43 639 682 639 684 0.95

Sequence Information

Coding Sequence
ATGCACGACAACTGGAGTGGCCTCAGTCTAGAACGTGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGATCAACCCATTGAATATCGCCGAGCAACAGCCCATATCTACAACAGAAGACAGCATCTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAACATTGCAACAATAACAATAACAACGGCGCACTGCAATTTGAAAGAGATTTTGAGAAGAACCACACATCACACGACCACGACTCAAGTGGAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGTCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAATTGGTGGTCGAAACAACGGCAACCGCGTCTAGCCTTAATTCAAGTACAATAGAACTTCAGAAGCTGCTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAGCTGGCACAGTTCTCAATGATGGCCGATTTCAATCTGATGAGCACGCTGGCCAATCAACAACATACTAACTCGGTAACACCAACTACCTCTGAAGTATCTGCCGCCGCCGCCAGTCCCGCACTCAAAGATACGCCCAGTCCCAGTGCGGATGCGCCTCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATTAGCGGCGATATAAAGGCAGCCAGAGCTCTGTCTGACTGTGCCACGTCCATTTCAGCGGCACGACACAGCTACAGTCACGAGGATCTGAACAGTGCGCTGCAGGATGTGCTGGTTAATAAACTGGGTACCCGCAAAGCAGCCAAGGAGTATCATGTGCCGCGCTCCGCGCTGCGCAACAAGCTGTGCAAAATGTCCTTGGATGCGAAACGACCGAATGCGCAAGCGACGCCAGAGCTGCAGCAGCAGCGGCAGCAGCGCTATCTAGGCGAGCAGGACGAGTCCGAGGAGGAGGCTGGTGATGGTGATGGCGACAGCAATGCCTCAACGCCAGCGCTGGGCTATCAGGAAATTGCCCAACGTATTGTGTCCACCGAGCATCTGCACAAGCTGAGCGCCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTTGATCCCGTTCTGTCGCCAAAGTCGTCGCGGACGCCACAGAGAGACGGCACTCCAACGGATATGCAAGCTGCAGCGGCAGCAGCAGCAGCAGCCGGTGGTGGCACCAATGCCACCGAAATGCCAATGCCCATCGATCCCACTGTTCTGCTGAATACGCTTTTCCTGGCTGCCGGCTTTGGTGTTATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGCTCAAATCGCTGCTAATGGCCAAAATTGCCGCCTATCGCCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCACTGGATGCCAATGAGGCGTGTGAGGATCCCATACTGAAGATTCCGTCCTTCAAGATCAGCGGCGCACCGAGCAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGTAGCCAGGATAGTCTGCGCAACAATGGCAACACCAGCGGCAGTGAATGCAGCAGCAGTGGAGGCGGTGGTAACAGCAGCGCGAGCAGGAAGCCAAGCATATCGGTGGCCAAAATGATTGGCGGCACAGACACCTCACGCTTTGGCGCCTCACCTAATCTGCTCGCGCAGCAACATCACAGCCATCTGCCACCCGCACATCATGCCCACCAGCAGCAGCATACGCATACGCATCCGCATCCGCATTCGCACTCACATCAGCATCAGCAGCTCAGTGCCCAGGATGCGGCGGCGTTGGCAGCTGGCAAGGGGACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCAGTCAAGGCCGTGCAGCGGGGTGAGATGTCTGTGCATCGTGCCGGTAGCTATTATGGTGTGCCGCACTCAACGCTGGAGTACAAAGTGAAGGAGCGACATTTGATGCGACCGCGCAAGCGGGAGCCCAAACCGCAACCGGATCTCGTGGGGCTGACGGGGGCAGCGAATAAGATTAGTTTGACTGCACTCAATAATCTAGACAAACTCAAGTCTGCCAGCAGCAGCAGCAGCAATGCCACCAGCAGTTCCGGCTCCAAGCTAAGCAATGCACTAAAGAGCAGCAGTAGCAGTGCGGCAAGTGCGGCGGCGTCGGTGCCCAATGGCATTAAGCTACCCATATATGATGCAGCACCGCAGCTGTCCTTTCAGCCGAACATGTTCTGGCCACAGACGAATGCCGGCGCCAACTATGCTCTGGACTTCAATCGCAATCCCGAATTCATCAAGTCACATCTGGCCGAGGTGATGCGCAACAGTCAACTGGGCGTGGCTAGCAATCATCATGGTCATGGTGGCGGGCATATGAAAAGTGCTCTTGACTTTGCCGAGAACATGTACGACGGCATCATCCGGAAGACGCTGAAGAACGATGGCGATGTGAGCACTAGCGGCAATGGCAATGCACTGCTGGATCAGCTGCTGGTAAAGAAGACGCCACTGCCGTTCACCAATAACCGCAGCAATGACTACCTCGGCGCCGCCTGTTCCACCTCCGAGAGCAACAAACGTGGCGGCAGTCCGATGGGCGCCTATACGGATATTAAACCACAACTTGCCAATGCAAGCAGCAACAAAAACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAAATTCGAGTCGGAGCAGCAAGCAGCGCAGATCTCGCCCAGTAACTCCATATTGCACGAAAAGCTGGCGAAGATCAAGGCCGAGCACTTCTAG
Protein Sequence
MHDNWSGLSLERVAEEFMGRRKWKHYQDQLTINPLNIAEQQPISTTEDSIYQKPLNHRLAQPNGQHCNNNNNNGALQFERDFEKNHTSHDHDSSGTSRSSSGSPSPPSEPNDWTPFDKCNFCVNGRLLTVNAKGELVVETTATASSLNSSTIELQKLLTQQAAEMTSMESMAAKLAQFSMMADFNLMSTLANQQHTNSVTPTTSEVSAAAASPALKDTPSPSADAPLDLSSKPSPNSSISGDIKAARALSDCATSISAARHSYSHEDLNSALQDVLVNKLGTRKAAKEYHVPRSALRNKLCKMSLDAKRPNAQATPELQQQRQQRYLGEQDESEEEAGDGDGDSNASTPALGYQEIAQRIVSTEHLHKLSAMSEHNGSELGDDLDPVLSPKSSRTPQRDGTPTDMQAAAAAAAAAGGGTNATEMPMPIDPTVLLNTLFLAAGFGVIPKLDETQTLGDLLKSLLMAKIAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKISGAPSKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHAHQQQHTHTHPHPHSHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKSASSSSSNATSSSGSKLSNALKSSSSSAASAAASVPNGIKLPIYDAAPQLSFQPNMFWPQTNAGANYALDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHGGGHMKSALDFAENMYDGIIRKTLKNDGDVSTSGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESNKRGGSPMGAYTDIKPQLANASSNKNKMMDLNGSNSVKFESEQQAAQISPSNSILHEKLAKIKAEHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00514099;
90% Identity
-
80% Identity
-