Dgri003372.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018153295.1
- Location
- JAECXY010000311.1:19920146-19934938[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-10 3.4e-07 29.6 0.0 2 44 310 353 309 354 0.88 2 3 1.2 2.5e+03 -2.0 0.3 1 11 446 456 446 463 0.84 3 3 5.6e-19 1.2e-15 56.7 0.0 1 43 701 744 701 746 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGTTCAACCCATTGAATATCGCCGAGCAACAGCCCATATCTACAACAGAAGACAGCATCTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAACATTGCAACAATAACAATAACAACGGCGCACTGCAATTTGAAAGAGATTTTGAGAAGAACCACACATCACACGACCACGACTCAAGTGGAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGTCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAATTGGTGGTCGAAACAACGGCAACCGCGTCTAGCCTTAATTGTAGCAGCAACAGCAACAACAACAACGGCACAGCTGAGCAGCAGCACGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAATCAATGGCCGCCAAGCTGGCACAGTTCTCAATGATGGCCGATTTCAATCTGATGAGCACGCTGGCCAATCAACAACATACTAACTCGGTAACACCAACTACCTCTGAAGTATCTGCCGCCGCCGCCAGTCCCGCACTCAAAGATACGCCCAGTCCCAGTGCGGATGCGCCTCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGACTGTGCCACGCCCATTTCAGCAGCACGACACAGCTACAGTCACGAGGATCTGAACAGTGCGCTGCAGGATGTGCTGGTCAATAAACTGGGTACCCGCAAAGCAGCCAAGGAGTATCATGTGCCGCGCTCCGCGCTGCGCAACAAGCTGTGCAAAATGTCCTTGGATGCGAAACGACCGAATGCGCAAGCGACGCCAGAGCTGCAGCAGCAGCAGCAGCAGCGCTATCTGGGCGAGCAGGACGAGTCCGAGGAGGAGGCTGGTGATGGTGATGGCGACAGCAATGCCTCAACGCCAGCGCTGGGCTATCAGGAAATTGCCCAACGTATTGTGTCCACCGAGCATCTGCACAAGCTGAGCACCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTCGATCCCGTTCTGTCGCCAAAGTCGTCGCGGACGCCACAGAGAGACGGCACTCCAACGGATATGCAAGCTGCAGCGGCAGCAGCAGCAGCAGCCGGTGGTGGCACCAATGCCACCGGAATGCCAATGCCCATCGATCCCACTGTTCTGTTGAATACGCTGTTCCTGGCTGCCGGCTTTGGTGTTATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGCTCAAATCGCTGCTAATGGCCAAAAGTGGCGGCATGATTAATGAGGCGGTGGTTAATGCTGCTGCATCTGGACACGAGAGCAATGGCAGTGCCTCACTGCTCGATCAGTGCCGGCTGCAACAGCAACAGCAACAACAGTTGCAGGATCTAAATGCAGTTGCCGCCTATCGCCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCATGTGAGGATCCCATACTGAAGATTCCCCAGGATAGTCTGCGCAACAATGGCAACACCAGCGGCAGCGAATGCAGCAGCAGTGGAGGCGGTGGGAACAGCAGCGCGAGCAGGAAGCCAAGCATATCGGTGGCCAAAATGATTGGCGGCACAGACACCTCACGCTTTGGCGCCTCACCTAATCTGCTCGCGCAGCAACATCACAGCCATCTGCCACCCGCACATCATGCCCACCAGCAGCAGCATACGCATCCGCATCCGCATTCGCATTCACATCAGCATCAGCAGCTCAGTGCCCAGGATGCGGCGGCGTTGGCAGCTGGCAAGGGGACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCAGTCAAGGCCGTGCAGCGGGGTGAGATGTCTGTGCATCGTGCCGGTAGCTATTATGGTGTGCCGCACTCAACGCTGGAGTACAAAGTGAAGGAGCGACATTTGATGCGACCGCGCAAGCGGGAGCCCAAACCGCAACCGGATCTCGTGGGGCTGACGGGGGCAGCGAATAAGATTAGTTTGACTGCACTCAATAATCTAGACAAACTCAAGGCTGCCAGCGGCAGCAGCAGCAATGCCACCAGCAGTTCCGGCTCCAAGCTAAGCAATGCACTAAAGAGCAGCAGTAGCAGTGCGGCAAGTGCAGCGGCGTCGGTGCCCAATGGCATTAAGCTGCCCATATATGATGCAGCACCGCAGCTGTCCTTTCAGCCGAACATGTTCTGGCCACAGACGAATGCCGGCGCCAACTATGCTCTGGACTTCAATCGCAATCCCGAATTCATCAAGTCACATCTGGCCGAGGTGATGCGCAACAGTCAACTGGGCGTGGCTACCAATCATCATGGTCATGGTGGCGGGCATATGAAAAGTGCTCTTGACTTTGCCGAGAACATGTACGACGGCATCATCCGGAAGACGCTGAAGAACGATGGCGATGTGAGCACCAGCGGCAATGGCAATGCACTGCTGGATCAGTTGCTGGTAAAGAAGACGCCACTGCCGTTCACCAATAACCGCAGCAATGACTACCTCGGCGCCGCCTGTTCCACCTCCGAGAGCAATAAACGTGCCGGCAGTCCGATGGGCGCCTATACGGATATTAAACCACAACTCGCCAATGCAAGCAGCAACAAAAACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAAATTCGAGTCGGAGCAGCAAGCAGCGCAGATCTCGCCCAGTAACTCCATATTGCACGAAAAGCTGGCGAAGATCAAGGCCGAGCAGTCCGAAGTGCATTCGGCAACCACCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTFNPLNIAEQQPISTTEDSIYQKPLNHRLAQPNGQHCNNNNNNGALQFERDFEKNHTSHDHDSSGTSRSSSGSPSPPSEPNDWTPFDKCNFCVNGRLLTVNAKGELVVETTATASSLNCSSNSNNNNGTAEQQHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMESMAAKLAQFSMMADFNLMSTLANQQHTNSVTPTTSEVSAAAASPALKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPISAARHSYSHEDLNSALQDVLVNKLGTRKAAKEYHVPRSALRNKLCKMSLDAKRPNAQATPELQQQQQQRYLGEQDESEEEAGDGDGDSNASTPALGYQEIAQRIVSTEHLHKLSTMSEHNGSELGDDLDPVLSPKSSRTPQRDGTPTDMQAAAAAAAAAGGGTNATGMPMPIDPTVLLNTLFLAAGFGVIPKLDETQTLGDLLKSLLMAKSGGMINEAVVNAAASGHESNGSASLLDQCRLQQQQQQQLQDLNAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPQDSLRNNGNTSGSECSSSGGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHAHQQQHTHPHPHSHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKAASGSSSNATSSSGSKLSNALKSSSSSAASAAASVPNGIKLPIYDAAPQLSFQPNMFWPQTNAGANYALDFNRNPEFIKSHLAEVMRNSQLGVATNHHGHGGGHMKSALDFAENMYDGIIRKTLKNDGDVSTSGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESNKRAGSPMGAYTDIKPQLANASSNKNKMMDLNGSNSVKFESEQQAAQISPSNSILHEKLAKIKAEQSEVHSATTEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00598804;
- 90% Identity
- -
- 80% Identity
- -