Dspr005824.1
Basic Information
- Insect
- Drosophila sproati
- Gene Symbol
- -
- Assembly
- GCA_018904355.1
- Location
- JAEIFY010000013.1:2517743-2519475[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-16 5.4e-13 48.2 0.0 2 45 381 424 380 424 0.95 2 3 0.04 87 2.7 0.0 28 37 454 463 453 468 0.90 3 3 1.7e-20 3.7e-17 61.5 0.0 2 42 490 530 489 532 0.96
Sequence Information
- Coding Sequence
- ATGAATCACCTCAGATGGATGGGCCACTCGTCCACAATAATGGATATTCAGCGCGTTCTGCTCCACCAGCAAAGCAACAATCAAAGCTGCGAGGTCCTGCTGGTGGCCAAAGATGGCATCAGTGTGCGTGCCCATCTGTTTGTGCTGAGTACGTGCAGCGATCTAATGCGCAATCTCCTCGTCGATTTACCCACTGGCCAGGAGGCAACAGTCATCCTGCCCGACATACGCGGCGAGCTGTTGGAGAGCATGTTATCTTTCATTTATATGGGTGAGACGAGTTTGCCCTCTGCCCTACTCTCCGAATTCCTTGAAGCCATCAATCTGCTGGGCATCAAGTCTGCCATTAGTTTTGAAACGAATCCAATAGCCATGACCAGTACAGATGTGATCAGCGGCGCTATGGCTATCGAGGCAGCAAAGTCAATTAGTGGATTGCAAATTGCAAATGCATCGCTTGTCGAGGAGGAGGAGGAAGAGGATGCTGGTGCGGTGGTTGGCAAACTTCAGATGGATAACACATTGCTCGCTAATTCCCAGCAGCAACATCAACAACAACAGCATCACGATCAGCAGCAGGGGCGAACGTTAGAGTTTCTTGATGTGTACAGTGATCAGCCGAAAATAACGTATTCCATTGAGCATATGGGCGGCACTAGCAATGGCAATCAGTATATATTAACGGAAAACACGGGCACCTTCACCATTACACAATCGGCATCTTCCGTAAATAAATTGGGCGATACAGTTAATCCCGTAATGGACACAGCGACGCACAGCGGAGAACTGGTTGACGATGAAGTCGAGGCGGATGTCACCGATGATCACGACGAATCCGAATCTCAGTTAATCGAGGAAGAGTACGGGGCATCCGCGGATCCCTTGATAGAGATCAGTGCAGATGCAGATGCCGATGCTGATATAACCGAGGATGTGATGCATGAAGTGGGTGCCGGCGACGAGGAGGAAGACGATGAAGAACTGCTGGATGTGAAGCCACGCAAATCCCACCTAGACATAAAAATGTTAAAAACAAAGGTACGCCAGCGCGCCACGCCCACAAAGGCTGCGTCCAAAAAAGCGATAACGAAACAGCATCAAGAGCATGTGGCACTGAAAAAGGAGCTCAAGGAAGATATCAATGATGCCCTTGATCTGGCTGCAGACGCTGTCCTCCACGAGGGACTGAGTCTGCAGAAGGCTGCCGATCGTTTTGACATATCGAAAACCGTATTGTGGCGACGGGTGCGCTCCAATCCGGCGTACATGCGAATCAAGCGAGAGAAGCCATCGCTATCGGAGGCCTACGAGCGTCTGAAGATCGGCGACTCTCTGAAGAGCATCAGCCAGGATCTGCACATACCGATGTCAACGCTGCACAGGCACAAGGTACGACTGGCGGCCCAAGGACGACTGCCCGATTTCGTCGCCTGTCGGCGGCGAGACAGCACCCCCAAGGATGAGCTGCGCGACAAGCTGGCGAAGGCATTACATGCCTGCATCAGCGGTGGCATGTCACAGAACCATGCCGCGAATCTCTTCGAAATACCCAAGAGCACACTTTGGCGACATTTACAGCGACGCGTCACCGAGGCTGAGCGAAAAGTCAAGGAGGAGCAGGAGGAGGACGACGAGGAGGATGGACTTAACTAA
- Protein Sequence
- MNHLRWMGHSSTIMDIQRVLLHQQSNNQSCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPTGQEATVILPDIRGELLESMLSFIYMGETSLPSALLSEFLEAINLLGIKSAISFETNPIAMTSTDVISGAMAIEAAKSISGLQIANASLVEEEEEEDAGAVVGKLQMDNTLLANSQQQHQQQQHHDQQQGRTLEFLDVYSDQPKITYSIEHMGGTSNGNQYILTENTGTFTITQSASSVNKLGDTVNPVMDTATHSGELVDDEVEADVTDDHDESESQLIEEEYGASADPLIEISADADADADITEDVMHEVGAGDEEEDDEELLDVKPRKSHLDIKMLKTKVRQRATPTKAASKKAITKQHQEHVALKKELKEDINDALDLAADAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKIGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPDFVACRRRDSTPKDELRDKLAKALHACISGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEDDEEDGLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00516912;
- 90% Identity
- iTF_00516912;
- 80% Identity
- iTF_00598979;