Dsil005159.1
Basic Information
- Insect
- Drosophila silvestris
- Gene Symbol
- Bro_1
- Assembly
- GCA_035043445.1
- Location
- JAWNMZ010000137.1:5474219-5474854[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-73 4.1e-69 231.5 0.7 1 153 35 183 35 193 0.96
Sequence Information
- Coding Sequence
- AtgcatcatcatcctcatcaaaATCTTGGCGATGCTGGCATAATGCCACCCTACGAAGCAATGGCGATGTACGAACAACCTAAACCCCGTTTCATCTTCAAAATGCCGCGGGTTGTGCCCGACCAGAGATCGAAATACGAGAGCGATGAACTCTTCCGGCGCCTGAGCCGGGAGAGCGAGGTGCGCTATACGGGCTATCGGGAGCGGGCAATCAATGAGCGTCGGATGCGTTTTGTGACTGACTGTCGGAAGGGCTACGCGGAGATCTCGTTTGTCGTCTCGGGCACAAATGTCCAACTGTATTTCAATGCCAATCACAATCCCTATGCCCAAGAGCAGGAGTGCGATTTCGACAAGGAGCGCGGTAAAGTTCACTTGCGCTCCAGCTTCATCATGAACGGGGTCTGTGTGCGTTTCCGTGGCTGGTTGGATCTGGAGCGATTGGACGGTGTTGCCTGTCTAGAGTACGATGAAGGACGTGCCTTGGTGGAGGATGCACAGCTGTGCGAGCAAATCGATAGCCACAATCAACGCATCAACGACTCAAAGCGCATTTATGTGCAGACGCCGCCACAGGATGTCATGCGACGTGGTTCGGGTCCAGCACCGGGATCGGGACCACCTATGGGCTGGTGA
- Protein Sequence
- MHHHPHQNLGDAGIMPPYEAMAMYEQPKPRFIFKMPRVVPDQRSKYESDELFRRLSRESEVRYTGYRERAINERRMRFVTDCRKGYAEISFVVSGTNVQLYFNANHNPYAQEQECDFDKERGKVHLRSSFIMNGVCVRFRGWLDLERLDGVACLEYDEGRALVEDAQLCEQIDSHNQRINDSKRIYVQTPPQDVMRRGSGPAPGSGPPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00582027;
- 90% Identity
- iTF_00500066;
- 80% Identity
- iTF_00516754; iTF_00518205;