Basic Information

Insect: Drosophila serrata
Gene Symbol: bab2
Assembly: GCA_002093755.1
Location: NW:1088919-1119944[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.87 1.8e+03 -1.6 0.5 2 13 338 349 337 351 0.87

2 2 1.1e-17 2.4e-14 52.5 0.0 1 43 668 711 668 713 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.87	1.8e+03	-1.6	0.5	2	13	338	349	337	351	0.87
2	2	1.1e-17	2.4e-14	52.5	0.0	1	43	668	711	668	713	0.95

Sequence Information

Coding Sequence: ATGGACATGACCAAACAGTTAATGGACTTCGAAATGAAGTCGGAATATGAAGGAGATCAATTTGAGGCAAATGATTACACAACGCCCACCGTTGAGGAGCCCAAAATGGCAACAGAACCTCTTATCGAGGACTCGGTGGAAAGTGATCGTAGATCCTCGCCAGAGAGGGAAGTGGAAACCACCACTTTTGAGGACCCCAAAGAGGCAGATCCTCATACAGAAAAGGACCTACCCGATACGGGTGTGATCAAGTCCACGGAAAAGGATTCAGATGTGACAGACACAGTCGTGGTGAAACCAAAGTCAAGTCTGGAGAATGATCAACCTCTGACACCGCCACCACGACCACTGACCTCCAGCGAGGTGGTGGGTCTCCGTGATCCCGATGATCCAGAGTTGCGTCTTCGCCTGGAGGCCAAGAAATCCCGCTCTCTGCCCGTCTCACCACAGCCTCAACAGCAGCAGAGCCTCAAGCTATCGGGATCATCGCTCTTTGAGTTTGGTCAGACATCATCATCGCCTCCTGTGGAGGCCAAGATCAAGAGTAGCCCCGAGTTGAAGGCCCCGCGAAGGAAACCACCTCCTCCCAGTGGAGTTGGGGATAACCAACAGTTCTGTCTACGCTGGAACAACTATCAATCCAACCTGACCAATGTCTTTGATGAGCTGCTGCAGAGTGAATCCTTTGTGGATGTCACCTTATCCTGCGAGGGTCAGTCAATCAAGGCTCATAAGATGGTTCTCTCCGCCTGCTCACCCTATTTCCAGGCCTTGTTCTATGATAATCCCTGCCAGCATCCCATTATCATTATGAGAGATGTAAATTGGTCAGATCTAAAGGCTCTGGTGGAGTTTATGTACAAGGGCGAGATCAATGTCTGCCAGGATCAAATAAATCCTTTACTCAAGGTGGCTGAAACCCTGAAAATCAGGGGTCTGGCGGAGGTTAGTGCGGGTCGTGGAGATGGTGGAGCATCTGCTCATCCCATGTCCGTctacgatgatgatgatgacgaggaACTGGCAGCGGCAGCTACTGCCATATTGCGGCAGCATGAAGATCTTGATCCCGATGATGAACTCAAGGCCAAGAGACCACGCCTGTTGCATGATGTCGCTTTGGATCTGAATAAGAGGCAAAGAAAGCGCTCTCGGGATGGTAGCTATGCCACGCCCAGTCCCTCGCTGCAGGGCGGTGAGTCGGAGGTCTCGGAGCGGGGCTCCACCTCAACTCCCGGCCAGAATCACCAGAGCAACCAACCGCTGGCCATGACCACATCAACGATCGTACGCAATCCCTTCGCCTCGCCCAATCCTCAGTCCCTGTCGGGTGGCAATGGTGGTGGCTCCTCCGCTGGAGGATCTCAGCGGAACTGCTCTTCGCCGCCACCTTCATCGGGTCATAGTAATGGCAACACTTCGGCTGCCATGCACTCTCCACCCGGTGGAGTGGCCGCTCAGTCTGCTCTGCCACCGCATATGGTTGCCGCTGTGGCAGCTGCCGCTCATCATGCCGCCGTTGTGCCACCACCTCCACCTGCCATGCATCATcatgccgccgctgctgccgcaCAGCAATTGGCGGCACAACATCAGTTGGCTCACTCGCATGCCATGGCCAGTGCTTTGGCAGCAGCGgctgcaggagcaggatcaggatcaggagcTGGTTCGGGAGCAGGATCAGGAGCTAGTGCACCGAGTGGAGGAGCTGGGGCAGGAGGCAGTGCCTCTGCCTCGTCAGTGGGATCACATCATGATGATATGgaaattaagccagaaattgCCGAAATGATACGCGAAGAAGAGAGGGCCAAAATGATTGAAAGTGGTGGCCATGGCTGGATGGGTGCTGCAGCGGCTGCCACCGGTGCTGCCTCAGTGGCGGCAGATAGCTATCAATATCAGTTGCAATCCATGTGGCAAAAATGCTGGAATACCAATCAACAGAACCTAGTGCAACAGCTGAGATTTAGAGAGCGAGGTCCTTTAAAGTCCTGGCGACCAGAGGCCATGGCCGAGGCCATCTTCAGTGTCCTGAAGGAGGGTTTATCCCTATCGCAGGCTGCTCGAAAATACGACATCCCATATCCCACATTCGTTCTATATGCCAATCGAGTTCATAATATGCTGGGACCTTCGCTAGATGGCGGTGCCGATCCTAGGCCCAAGGCCAGGGGTCGTCCTCAAAGGATCCTGCTGGGCATGTGGCCCGAGGAGCTCATACGCAGCGTCATCAAGGCGGTGGTCTTTAGGGATTATCGTGAAATCAAAGAGGATATGAGTGCCCATCAGTATGCCAATGGACAGGCACATGGTTCCCACTTTGGCGCTGGTTCCGCCTCAAATGGCTATCACagtgccgctgccgctgccaaaATGGCCGCCCAGAATGCTGCACTTGCTCCACCGGATGCTAGCAGTCCGCTGAGCTCCATGACAGAGACCCTGCGCCGTCAGATTCtctcccagcagcagcagcatcaacagcagcagcaggcgcacCACCATCAGGCACAATCGCACCACCAACAGCAACCGTCACACCACCCACAACAGTCGCCCCATGGTCAGTCCATGAATATGTACAAGTCACCGGCTTATTTGCAACGCTCTGAGATCGAGGATCAAGTATCCGCAGCAGCGGCAGTTGCTGCAGCGGCGGCCaagcatcagcatcatcagcagcatcagcagcatcagcatcagcaacaccagcagcagccgcaacaGCAGGGATCGGAGCGACGGGGAGCAGAGAATATGCCCGATCTCTCGGCTCTGGGTTTGATGGGTCTGCCCGGTCTGAATGTGATGCCCTCGCGGGGATCCAGTGGAGGAGCGAGTGGCTCTGCGCCCAATAGTGCCGCCTCCTATGCTCGCGAGTTATCCCGGGAGCGGGAACGTGATCGGGAGCTATCCCGGGAAAGGGAAAGAGAGCGTGAGCTATCCCGCCAGTACGGCAGTCAGTCGCGTGGCTCTAGTTCCGGTTCCGGTAGCGCCAAATCCCTGACCGCCAGCCAAAGACCCGGCGCCGCCTCTCCCTACTCCGCCGCTCATTATGCCAAGCATCAGGCCAGCGCCTATAATAAACGCTTCCTGGAGAGCCTGCCCGCCGGCATTGACTTTGAGGCAATTGCCAATGGTTTGCTCCAGAAATCGGTGACCAAGAGTCCTCGTTTCGAGGATTTCTTTCCGGGACCAGGACAGGATATGAGTGAACTCTTTGCCAATCCAGATGCAGCTGCTGCGGCAGCTGCGGCGGCTGCCTATGCGCCACCAGTGAATCCTGTACGAGAATCACCACTGATGAAGATCAAGCTGGAGCAGCAACATGCCGCCGAGTTGCCACACGAGGATTGA
Protein Sequence: MDMTKQLMDFEMKSEYEGDQFEANDYTTPTVEEPKMATEPLIEDSVESDRRSSPEREVETTTFEDPKEADPHTEKDLPDTGVIKSTEKDSDVTDTVVVKPKSSLENDQPLTPPPRPLTSSEVVGLRDPDDPELRLRLEAKKSRSLPVSPQPQQQQSLKLSGSSLFEFGQTSSSPPVEAKIKSSPELKAPRRKPPPPSGVGDNQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVNWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGDGGASAHPMSVYDDDDDEELAAAATAILRQHEDLDPDDELKAKRPRLLHDVALDLNKRQRKRSRDGSYATPSPSLQGGESEVSERGSTSTPGQNHQSNQPLAMTTSTIVRNPFASPNPQSLSGGNGGGSSAGGSQRNCSSPPPSSGHSNGNTSAAMHSPPGGVAAQSALPPHMVAAVAAAAHHAAVVPPPPPAMHHHAAAAAAQQLAAQHQLAHSHAMASALAAAAAGAGSGSGAGSGAGSGASAPSGGAGAGGSASASSVGSHHDDMEIKPEIAEMIREEERAKMIESGGHGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYANGQAHGSHFGAGSASNGYHSAAAAAKMAAQNAALAPPDASSPLSSMTETLRRQILSQQQQHQQQQQAHHHQAQSHHQQQPSHHPQQSPHGQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQHHQQHQQHQHQQHQQQPQQQGSERRGAENMPDLSALGLMGLPGLNVMPSRGSSGGASGSAPNSAASYARELSRERERDRELSRERERERELSRQYGSQSRGSSSGSGSAKSLTASQRPGAASPYSAAHYAKHQASAYNKRFLESLPAGIDFEAIANGLLQKSVTKSPRFEDFFPGPGQDMSELFANPDAAAAAAAAAAYAPPVNPVRESPLMKIKLEQQHAAELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00591760;
90% Identity: iTF_00527232;
80% Identity: iTF_00594614;