Dkik010797.1
Basic Information
- Insect
- Drosophila kikkawai
- Gene Symbol
- bab2
- Assembly
- GCA_018152535.1
- Location
- NW:61293-92045[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.86 1.8e+03 -1.5 0.5 2 13 335 346 334 348 0.87 2 2 3.1e-17 6.4e-14 51.1 0.0 1 43 665 708 665 710 0.95
Sequence Information
- Coding Sequence
- ATGGACATGACCAAACAGATAATGGACTTTGAAATGAAGTCAGAGTACGAGGGAGATCAATTCGAGGCGAGTGACTATACAATGCCCAGCGTAGAAGATCCCAAAATGGTGTCACAACCCCTCATTGAGGACTCGGAGGAGAGCGATCGGAGATCCTCGCCGGAGAGAGAAGTGGAAACTAGTTTTGAGGACCCCAAAGAGGCAGATCCTCAAACAGAGAAAGACCTACCCGACACAGGTGTCATCAAGTCCACGGAGAAGGATGCAGACACAGCAGACACAGTGCTGGTGAAGCCAAAGTCAAGTCTGGAGAACGAACAGCCCCTGACACCGCCGCCCCGCCCGCTGACCTCCAGCGAGGTGGTGGGTCTCCGCGATCCCGACGACCAGGAGCTGCGTCTCCGCCTGGAGGCCAAAAAGTCCCGCTCCCTGCCCGTCTCGCCACAGCCCCAGCAGCAAAGCCTCAAGCTGGCGGCATCGGCTCTCTTCGAGTTCGGCCAGGCATCATCATCGCCTCCCATGGAGTCTAAGGTCAAGAGCAGCCCGGAACTGAAGACTCCGCGCCGAAAGGTAACTCCTCCCAGTGGCGGGGACAACCAGCAGTTCTGTCTGCGTTGGAACAACTACCAGTCCAACCTGACCAATGTCTTTGACGAGCTGCTGCAGAGCGAGTCCTTCGTGGACGTCACCTTGTCCTGCGAGGGTCAGTCGATCAAGGCCCACAAGATGGTCCTCTCCGCCTGCTCGCCCTACTTCCAGGCTTTATTTTACGATAATCCCTGCCAGCATCCCATTATAATCATGCGGGACGTGAGCTGGTCGGACTTGAAGGCTCTGGTGGAGTTTATGTACAAGGGGGAGATCAACGTTTGCCAGGATCAGATAAATCCGTTGCTCAAGGTGGCCGAGACCCTGAAGATCAGGGGCCTGGCGGAGGTCAGTGCGGGTCGCGGAGATGGCGGGGCATCCGCACATCCAATGTCCGTttacgacgacgatgacgacgaggaGCTGGCGGCAGCAGCCACTGCCATTTTGCGACAACACGACGATCCCGATGCGGACGATGAGCTCAAGGCCAAGAGGCCGCGCATGCTGGCCGACGGCGCCCTGGATCTCAACAAGAGACAGCGAAAGCGCTCCCATGACGGTAGCTATGCCACGCCCAGTCCCTCGCTGCAGGGCGGCGAGTCGGAGATTTCGGAGCGCGGTTCCACCTCGACTCCCGGCCAGAATCAGACCAACCAGCCACTGGCCATGACCACTTCGACGATCGTGCGCAATCCCTTTGCCTCGCCCAATCCCCAGTCGCTGTCGGGCGGCAATGGAGGCGGCTCCTCCGCCGGAGGATCCCAGCGGAACTGCTCCTCACCGCCACCAGCATCGGGACACAGCAATGGCAGCAGCTCGGCAGCCATGCACTCCCCGCCAGGCGGAGTGGCCGCCCAGTCTGCTTTGCCCCCGCACATGGTCGCCGCCGTGGCTGCTGCCGCTCACCATGCCGCCGTTGTGCCACCCCCTCCACCCGCCATGCATCACcatgccgccgctgctgctgctcagcaGTTGGCCGCCCAACATCAATTGGCTCACTCGCATGCCATGGCCAGTGCTCTGGCAGCAGCTGCCGCAGGAGCAGGCTCGGGATCGGGAGCTGGCTCGGGCGCAGGATCGGGAGCCAGTGCACCGACTGGCGGTGCTGGAGTAGGAGGCAGTGCCTCTGTCTCATCAGTGGGTTCCCATCACGATGACATGGAAATCAAGCCGGAAATTGCCGAGATGATTCGCGAAGAAGAGAGGGCCAAGATGATCGAAAGTGGAGGACATGGTGGCTGGATGGGTGCTGCAGCCGCTGCCACCGGCGCTGCCTCAGTGGCGGCAGACAGCTACCAGTACCAGTTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAATCAACAGAACCTGGTGCAGCAGCTGAGATTCCGGGAGCGAGGACCCTTAAAGTCCTGGCGACCAGAGGCCATGGCCGAAGCCATCTTCAGTGTGCTGAAGGAGGGCCTATCCCTGTCGCAGGCTGCCCGCAAGTTCGACATCCCGTATCCCACTTTCGTTCTTTACGCCAATCGAGTTCATAATATGCTGGGACCCTCGCTGGATGGCGGTGCCGATCCTAGGCCCAAGGCCAGGGGTCGTCCGCAGAGAATCCTGTTGGGCATGTGGCCGGAGGAGCTCATCCGCAGCGTCATCAAGGCGGTGGTGTTTAGGGACTATCGTGAAATCAAGGAGGATATGAGTGCCCACCAGTATGCCAATGGACAGGCCCATGGTTCCCACTTTGGCGCTGGTTCCGCTTCTAATGGCTATCACagtgccgctgccgctgccaagATGGCCGCCCAGAATGCAGCACTGGCTCCCCCAGATGCTGGCAGTCCGCTTAGCTCCATGACGGAGACCCTGCGCCGCCAGATTCtctcccagcagcagcagcaacagcatcaacagcaggcGCACCACCACCAGGCGCAATCgcaccaccagcaacagcCATCGCACCACCCACAGCAGTCGCCTCACGGCCAGTCGATGAACATGTACAAGTCGCCGGCTTACCTGCAGCGCTCCGAGATCGAGGATCAGGTGTCCGCGGCGGCAGCAGTGGCTGCAGCGGCGGCCaagcaccagcatcagcaccagcagcaacagcagcagggtTCAGAGCGGCGGGGAGCAGAGAACCTGCCCGATCTCTCGGCCCTGGGACTGATGGGTCTGCCCGGCCTGAATGTAATGCCCTCAAGGGGATCGAGCGGGGGTGCGGGTGGTGCGCCGCCCAACAGTGCCGCCTCCTATGCACGCGAGCTATCACGGGAACGCGAGCGCGACCGTGAGCTCTCCCGCGAACGGGAACGGGAGCGCGAACTGTCCCGCCAGTATGGCAGCCAGTCGCGGGGCTCTAGCTCCGGTTCCGGCAGCGCCAAGTCCCTGACCGCCAGCCAAAGACCCGGCGCCGCCTCGCCCTACTCCGCCGCCCACTATGCCAAGCACCAGGCCAGCGCCTACAACAAGCGCTTCCTGGAGAGCCTGCCCGCCGGCATAGACTTTGAGGCGATTGCCAACGGACTGCTCCAGAAGTCGGTGACCAAGAGTCCCCGCTTCGAGGACTTTTTCCCGGGACCAGGCCAGGACATGAGCGAGCTGTTTGCCAATCCGGAtgcagctgctgcggcggctgcggcggccGCCTATGCGCCGCCCGTGAATCCGGTTCGTGAATCGCCGCTGATGAAGATcaagctggagcagcagcatgcCGCCGAGCTGCCACACGAGGATTGA
- Protein Sequence
- MDMTKQIMDFEMKSEYEGDQFEASDYTMPSVEDPKMVSQPLIEDSEESDRRSSPEREVETSFEDPKEADPQTEKDLPDTGVIKSTEKDADTADTVLVKPKSSLENEQPLTPPPRPLTSSEVVGLRDPDDQELRLRLEAKKSRSLPVSPQPQQQSLKLAASALFEFGQASSSPPMESKVKSSPELKTPRRKVTPPSGGDNQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGDGGASAHPMSVYDDDDDEELAAAATAILRQHDDPDADDELKAKRPRMLADGALDLNKRQRKRSHDGSYATPSPSLQGGESEISERGSTSTPGQNQTNQPLAMTTSTIVRNPFASPNPQSLSGGNGGGSSAGGSQRNCSSPPPASGHSNGSSSAAMHSPPGGVAAQSALPPHMVAAVAAAAHHAAVVPPPPPAMHHHAAAAAAQQLAAQHQLAHSHAMASALAAAAAGAGSGSGAGSGAGSGASAPTGGAGVGGSASVSSVGSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYANGQAHGSHFGAGSASNGYHSAAAAAKMAAQNAALAPPDAGSPLSSMTETLRRQILSQQQQQQHQQQAHHHQAQSHHQQQPSHHPQQSPHGQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQHQHQQQQQQGSERRGAENLPDLSALGLMGLPGLNVMPSRGSSGGAGGAPPNSAASYARELSRERERDRELSRERERERELSRQYGSQSRGSSSGSGSAKSLTASQRPGAASPYSAAHYAKHQASAYNKRFLESLPAGIDFEAIANGLLQKSVTKSPRFEDFFPGPGQDMSELFANPDAAAAAAAAAAYAPPVNPVRESPLMKIKLEQQHAAELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00591760;
- 90% Identity
- iTF_00527369; iTF_00594614; iTF_00594470;
- 80% Identity
- iTF_00527369;