Basic Information

Insect: Drosophila sechellia
Gene Symbol: lov_1
Assembly: GCA_004382195.1
Location: NC:21029044-21037958[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7e-19 1.4e-15 56.4 0.0 1 44 779 822 779 823 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7e-19	1.4e-15	56.4	0.0	1	44	779	822	779	823	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCCACCAGGAGTTGATTAAACATCGCCAATCGACGAAGCTCTCCATGACCGACTTCGCTTGTCAGGCGGCGCCTGCAAATCAGCCTCTGCCGCTAGAACTACCGCTGCCTTTGTCAGTGCAGCTACAGCTTTTAGCCAAGACTCCGACCAGTGATCACGCCCCAATGCACTCTACGCCTCCGACGACCCCGCCTACGCCACCACCTCTGCCCTTGAACATGAGTCAATCGGCATCGGCGGTAACGGAAGCTGCTACTCCAGAGAACAGTCTGCCTGCCACACCACCCTCAGAAGGTGCACTAGCTGTACCTTCGGCCCCACAGGATCACTACAGCCTGCGCTGGAACAACCACCAGAACCACATCCTGCGGGCATTCGATGCACTGCTAAAAACCAAAACGCTGGTGGACGTGACACTGGTCTGCGCGGAGACTTCGATCCGGGCTCACAAAATGGTGCTCTCCGCCTGTTCGCCCTTCTTCCAGCGCGTCTTTGCGGAGACTCCCTGCAAGCACCCCGTAATAGTGCTCAAGGATTTCCGGGGTTGGGTAGTGCAGGCCATTGTAGACTTTATGTACCGCGGAGAGATCAGCGTGCCCCAGCAGCGACTCCAGACACTCATCCAGGCCGGTGAGTCGCTTCAAGTCCGAGGCTTGGTGGAGAGCTCTGTCCCAGAACACACTCCCACACCGGCCGCTTCTCCTGATGATTTCGGGATGTTGGACACCTCCATGCTGTCCTCTAGCTTTGAGGACGAGTGTCCGACAATGGTCCGACCCTCTAAGGGTGGAAAGCTTTTGATGCCGTCTCCCCGACTGTTTGGCAACGCTTCAAGTGCCATTGCTGCTCTAGGTGTGCGACGAAAACGAGAGCAGGAGTGCGACCGCGACTTGGAGAGTGATCAGGAGCTGGGAGGCAGTTCACCTATGCCACGACGTAAGCAAGCGCGACCGCGGCGCCGTTCCGGTGATGTGCCGCACGACTTTACCCTAAACAAAACCGATGCAGAATCCTTGCAAACTGTGATCAAGCACGAGCTTCtggagcgagcggaaagagatcAGGAGGAGACTCCTGATCGAGATCACGGCCAAGGTGAAGCTGAACAAATTAGTTCGTCGCCAGCAAAAACGTTGGTCGAAAAGGCTAAGGAGCAAAAGTCCATGAAACAAGAAGGATCCGATCAAACACGCAGCCTCAACGAGAATCACCATCAACTCGAGCTtgacgatgatgacgacgacgatcAGGATCATGAAGAGGAAGAGGAGCAAGACATTGAAGAGCTTATTCATACGACCAACGAGCTGAGGCGTCAGGCTGCAGCGGCTGCTGCAAATGCGGCAGCCATGTCTCCCAACCCTTCTCCCTGCCTCAGTGACGGGCCCGAGGACCTCTGCACCACTAACAAAGGCAAGGAAGGAATTTCTGGCGCCTCTAGCTCGGCAGACTGTGAGtccaataacaacaacagcagcaagctACAGGATAACAACCAGCGCATAATGCTGTCTCTGAAGGACATCCGCCAACTAAACGCTAATCCGAACCCCACGGCCATCCACACGCCTACTAGCTGTTCTGGGGGCAACAACGGACTGCTTACTTTCCCTCCGCCCGGACTTCGGCCTCCTGGTCTACCAGACAGCCCGCCCTGCCACATGGAAGCTCTAGAGGCACAGATGCACgcagctgcggctgctgccGTGGCGGCTGCTGGATCTGGGGAGCATCCCTTCCATCATATGGAGCACCAGATGGAGATGTCTTTGGCGGCTGCCGCGGCAGCTGCTGCGATGCATCAGCGTGAGCCACGGGATCCCCGTGATGGGCGCGACCACAACGCCTTCGCGAGCAATTTGCTGGGGCCAATGGGGATGCCCCCGTTCGGAGGACATAACGGAGGCCATCCGGGCAACAGTGGTCCAGGAAACGGATGTCCTGGACAGGCTGCGCACGAAAGACTTGAGGAGAGTATGAATCGACTGAGTAAGGAGCTTGGTAAGGAGTTTGGTCCGGCATCGCCGATGAGTCTGCAAGGTCCCTTCAATGCACCGGATGGACCCCCGCATCCGCCATCACCACTGCCCTTTCCTGGCATGTCCTCCGCGATGACGCTGACTCCGCCACATATGTTTGGTCTCGACTCACCACTTGGACTCTTTCCACCCGGAATCGATCCCGGCAAGCTTTATAACCCGTTAATGGAAATGAGCGATCCAAGGGACATGCCTGGCGGGCCGCCTCCGTTTCTTAAAAAGAAAATGCCGCGACCAAAGGGACAGCATTCAGCCCCACGCGGCGGTCCACCGCGCTCATGGACTAACACAGAACTGACGGAGGCACTTCAGCACGTTTGGAACAAAAAGATGACCACGTCGCAGGCGTCGCGGATTTTCGGTATCCCCTACAATTCTCTACTGATGTACGTCCGGGGAAAATACGGAAAGAGTTTAAAACTGGAGCAGCTGCGGAAGGACTGCATCAGTGGACCACCGATAGAAATGCTGCAAATGGGCATCGGCGGAGGTAGCGGTGGTTCCACGAAGAATGAGAAGAGCAAGGAGCGcaaggagaaggaaaaggacAAGAACTCTATGAGCAGCAACGGTTCGGGTGGGTCTGCCAATGCCCAAGGCGGAGGACCGACCTCCGGCAGTGGGCCAATGCAGCATCCTGGTGAACTGGGGCCTATGGGACAGTTAGACTTGGATCTGGGACTTCCCCTGGGTCCCCCAGGAGGACCGCGTAGTAACAGTTCAGAGCCCGATTTACTGAGTGCCCCAAATGCCCTATTCAATCCCTTCAACCCACAGGGCTTCTACCCAGATTTTTCGGGCGGCTTTCCTGGTCTCCCTCTGAGCATGTTAAACCTTTTGCCGCCGGCAGAGCGCCATCATGCAGCTGCAGCTATGCACCATCTTGGCGTGAGCATGGATGAGGACTGCAAGTCTGTTGGATCGAAGCAATCCTCCTCCGTAGACGAAGACTATTCAGGTCCTGGACTACCGCTCTCGCTGGAGCACCGTCGGGAGATAAGCGCGACAGGCCCACCACTTACGCCATCCAACGGTGGGACCGGGCATGATTGA
Protein Sequence: MLKDAHQELIKHRQSTKLSMTDFACQAAPANQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPPPLPLNMSQSASAVTEAATPENSLPATPPSEGALAVPSAPQDHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGMLDTSMLSSSFEDECPTMVRPSKGGKLLMPSPRLFGNASSAIAALGVRRKREQECDRDLESDQELGGSSPMPRRKQARPRRRSGDVPHDFTLNKTDAESLQTVIKHELLERAERDQEETPDRDHGQGEAEQISSSPAKTLVEKAKEQKSMKQEGSDQTRSLNENHHQLELDDDDDDDQDHEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTNKGKEGISGASSSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGLLTFPPPGLRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGSGEHPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRDGRDHNAFASNLLGPMGMPPFGGHNGGHPGNSGPGNGCPGQAAHERLEESMNRLSKELGKEFGPASPMSLQGPFNAPDGPPHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGIGGGSGGSTKNEKSKERKEKEKDKNSMSSNGSGGSANAQGGGPTSGSGPMQHPGELGPMGQLDLDLGLPLGPPGGPRSNSSEPDLLSAPNALFNPFNPQGFYPDFSGGFPGLPLSMLNLLPPAERHHAAAAMHHLGVSMDEDCKSVGSKQSSSVDEDYSGPGLPLSLEHRREISATGPPLTPSNGGTGHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605660;
90% Identity: iTF_00592472; iTF_00596737; iTF_00539741; iTF_00596573; iTF_00539583; iTF_00504610; iTF_00619076; iTF_00504773; iTF_00619231; iTF_00591623; iTF_00591778;
80% Identity: iTF_00592472;