Basic Information

Gene Symbol
hang
Assembly
GCA_018903575.1
Location
JAEIGH010000004.1:2453302-2465860[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.21 23 6.2 1.0 3 23 295 316 294 316 0.93
2 16 0.15 17 6.7 3.5 3 22 420 439 418 439 0.89
3 16 0.00045 0.05 14.6 3.3 1 22 535 556 535 558 0.90
4 16 0.052 5.8 8.1 0.1 2 21 570 589 569 590 0.93
5 16 0.00052 0.058 14.4 0.2 2 23 720 742 719 742 0.95
6 16 0.0015 0.17 13.0 0.1 1 23 750 773 750 773 0.96
7 16 1.2e-05 0.0014 19.6 0.1 2 23 860 881 859 881 0.97
8 16 0.00021 0.024 15.6 2.9 2 23 975 997 974 997 0.97
9 16 0.017 1.9 9.7 0.2 2 23 1006 1028 1005 1028 0.95
10 16 0.0015 0.16 13.0 0.9 1 23 1064 1087 1064 1087 0.96
11 16 0.32 36 5.6 1.5 2 20 1095 1113 1095 1113 0.96
12 16 6.3e-05 0.007 17.3 0.2 3 23 1213 1233 1212 1233 0.98
13 16 0.0038 0.42 11.7 0.1 1 23 1268 1290 1268 1290 0.97
14 16 0.00045 0.051 14.6 0.7 2 23 1374 1396 1373 1396 0.93
15 16 0.89 1e+02 4.2 0.1 2 20 1416 1434 1415 1436 0.91
16 16 0.0048 0.54 11.4 0.3 3 23 1451 1471 1451 1471 0.98

Sequence Information

Coding Sequence
ATGTGTGACACAGCGATAACAGTAAATTCTACAGCAACAATAACATCAACAGGAGCAATACCAAATGCATCTGGACCTCAAATACCAGCTACAATTATAGCCACAGCTACAAAAAAAGAAACACAGCGAACGCCACAAAATTGTTGTCGACTCTGCATTGCTCCGGCCACAGAGTGTATTTCGATCATCAATAGCTATGCAGCCGATAAGGAGCCGCTGACCACCAAAATCTATAATTGCGTCAATATCAAGATCACATCCCAGGATCGTTTATCACAACAGATTTGTCATGCTTGCATTAGCTATCTGAATTCTTGGCAAAGTTTTAAGAATCGCTGCCTTAGCTCACAGTCGAAGCAGCGACAATGGCTGGAGACTTCAGCGACAACGACGACGCCGCCGACGACGACGAGTGGTTCGTCACTTGGTTGTGTCCTACCGCTACCACCGCCAAAGCCTCTGTCAATGCCACCAATGGCCGTGGCCACCACTTCAACGTACTCGACGACGTCGATAACGCCGACTCCGATACCGACTCCGACTCCGCTGCTTATGCCAGTGACGCTACAGAGCGCCACACAGCAATTGCGATTTTTCAGACGATATTCCTATAATCCTCTGCCCGCTGTGCCCATTAAAGATGAGCCTATAGATGATACAGAAGATGACTATCAGATGAAGTCCATAGACGAATCCATAGATGATATGGTAGATCCCACAATGTTCCTAGAGCGTTCGGAGCTTGAAGGCGATGTGCCATTAATGACTTCGGACTATGATTATACAGCCCAGCATGGCGTCACAGCTGCTGTAGCGGCTGCCTCACTACCAGCCAGCGCTGTTGCTAATGTGGCCGCTGCCGGTGATTCAAAGGTGGCCAGTTGTCGCGCATGTAGCCTACAATTTTCCACAAGAGCAAATGCCCGCCGTCATGAGCGAAATCTGCATCCGAATCTCTTTCAATTGTCCACCGATTCGCCTAATAATACACCAGTTACCAAACCAACGCCGGCCTTAGCTGCTGCCCTGGAAATTCAACGGGCCGCTGCTGCTGCTGCCACAGCCGAGGCAAATCGTTCTGGTGGCAATATGTCCACACAAAAGTATCGTCAGGTGGTAATGAATGCGTTTATCAAATGTGAAGCTGGTGGCTATGACTATGACAATCCCGAGCAATATCAGTCTCTTTTAAGTCGCGATAAAATTGAGTTTATCGAACAGAATGCCGAATTTCTCGAGCAGTATCAAACAATGACCTGTCGATGTTGCAACAAGTTCTTCAGTACCTATAAGAACTTCATGGCTCATGTGCGAAAGAAGTATCCATTGTTGCCACGAAACCTCTGCTTTAATTGCCTCAAAATGAATGATTCGAAGGCATTGTTTATCTCACATCTGAAGAAGCGCAACTGCATCAATTTGTACAGAGTGATGAATGCCTTGAATAATAAGCAAAGTGATGGAGTTGCAACAGTTGCTTCTTCTCCAGCTATTGTTGTGCCAGCAACAGTGGCGGCTGTCTCGGGATCGAGTACAACAACAACAACTACTTCAGACCGGCCAGAGAAATTGCGCGCTAAGGAGCTACTGGTCAATAAGCTCTACGAATGTAAACTCTGTCCAAAAGGTTTCCGCACCAAACATGAATTCCGCACTCATGTTTATGACAAGCATGCAGATGTTCAGCGGAAGGATAACAATTCCATTCAGTGCAGCTTCTGTGGCCTAGACTTTGCAGATCCTGTAGACAGGCGACGGCACTATAACAACATGGATTGCATTGTCCGCCTGCGTTGCATGACCTGCGATGCTAAATTGGAGACACATCAACGATTCCTCGATCATGTATATCAGGATCATTTGGGAGGCCTGAGCAGTGATAATGCCTCATCGACGACTGTAAGTGGCGCCAATGTGGACAATTCGCATTCCCCTGGCAAAAAAAATCTGCTATGTGCTTTGGGCATAGGATCAGCAGATGAATCCCGGAGTGCCACGCTACCATTAAATACATCTACGCCGAAGCCAGTTGGAGGCGGAGCATCATCAGCTGCATCAACAACATCAGCTAGTGGTGGCTTATTAGGCGGTGGTACTTCAGCCAGTCGCGATCGAGATGGAGCACCAAAGTCTCAATACTTCTCTCGCATGCCTCAAGTCTGTCCCATTTGTGGCCAGCAATATAACAACTACAACAATGTTCTCAGACACATGGAATCGAAGCATCCCAACAAACTGCCCGAAACGTACAAATGTGTACGATGCGGTTTAGGCTATCCAAGAATCTCGTATCTCCGCGAGCACATGATTAATGTCCATGGCGTTGATAAAAATCGACATTCAGGCGGATTTGAATATATTGTTAATGCGGATGCCGTTAAACTGGCTGATGGCAGTACTCCGAATGTCTATACGGGCAGATATGATTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGATGACGATGATGAGGAGACAAGCGGTAGCGTGGCCAAGAAGATACGTCTAGATGATAGCAGTAATAACAGTAGTTTGATGGGCATGGCCGCTACACAGCAAAAGGAGTGCCCCATCTGCAATGCGGTATTCAGCAACAACATTGGGCTATCAAATCATATGCGTTCCCATTATACAGCCTCAGCAAATGCTTCAGCCTCGGCGAATGCTTCGGCGTCGACTTCCGCCTCATCCAGCACAAATGCTGCTTTGGCTGCAGCCAATCGCATGACACCGAAATCACTGACTATAACAGCAGCTCCCCCAATTACGGCGGAAGTATCACAAACAGTGCCACCAAAAAAGGAGTCGGCTACTGTCCTCTCGTCATCATCATCGACATCCCATGTCCAGGGGTTACAATTTCGCCGCAGTTTGGATCAGGCAGCCGATCGTCGGTTTCGGCGAATGCGTTGCCGTATATGCCAGAGACGCTTCAGTTCTAAGAAATCGTATCGTTATCACATGCTCACCGATCATCAAGTCCAGAATGTCCAATTCATAAAATGCAAATTGTGTAATGCCGAATTTGCCTACGAGAAGGGTCTTAAAGTGCATCTGTTTAAGGTGCATGGCAAGGCCATCAAGGATGAGATGATAATCAAGCAATTTGAATGCGAGATTTGCTCCATTTTGGCAATTCACATTAATTCCCATGATGAGTTCGATTCCAATGATTATTCGTGCAAGGATTGTGGCAATGTCTACAGTGGAAGGAAAAGTCTTTGGGTACATCGGTATAAGAAGCATCCGCAGGTGCCTGATCCGGCCGAGTGTTGTCTGTGCCGCAAAGTCTTTTTCGATCGTCAAATGCTGGACAATCATATGCCGACTTGTAATCGCAAGCCCATAACGTCCACTGGGGCACATCAACAGCAACAACCGCAGCAACAACAACAACACCACCAGCAAGATCAGCTAAGACGCGGTCTGGTAGTATTCAAACACAAAACTGGCGACGATGATGAGGACGAAGAGGATGAAGATCAATTGCAACAACAAGCGCAACTTCAACTGGATGATACAACCGATGACGCTGCCGACGTGAGTAATTCTCCTGCTGTCGCTGCGGCTTCATCCTCGTCCACGTCCGCTCACGTTAAGATACGCATACCTGAAGTGGCATGTACCATTTGTGGGGCAAGATTCATTGATCAGGAAATGTTTACCAAACACATACAGAAGCATGAACAGGAATTATATGTAGATAATCCCTTGGCAGCCATGTTCGATGATGGTCCAGCTGATCCCGGACAGTTTCAAGTGGAGCGACAGAACGAGAATGGGGAATATGCATGCGATTTATGTGCCAAGACATTCCCCCAAGTGATTGCACTTAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACAGCGAAGCGACACAGTTGAACAACAACAACAACAATTCGATGTTGCATCTACGCGAATTACATGCAGTGGGTCTGGTGCCCAATCAACAACAACAGCAGCAACTGAACTCCAGTCACAACCAGAACCAGAGTCAACAGCAACAACAGAGCCACAACTCATCAGGAACCTCAACGACGGCAACAACGAACAAATCGCTGAAACGGAAACGTGAATTGAAATGCGATTATTGTGCCTCCACCTTCATCAGCAACAACAATCTGCGTCGTCATATGTATGAACTGCACAAACATGAGGTTAGCCATTTGCCAGAACCACCAGTTATTGTGGTAGATGAGCTACTGTCATGTCGCCGTTGTAATCTCCGATTTGATACAAAGGAATTGTGGATTGAGCATAAATTGGCCGATGCTAAAGTGGTGCGTCCGTTTTGCCCCTTTCAATGGGGATGTGATTTATGTGGCGAGTATTTGTCACGCAAGGAGAAGCTCATCAATCATATTAATAATCATCTTAAGGAGGATGTTATAGTCCCTGTGGCTGACAAAATTATCGTAACAGTCTCAGGTGCGACAACATCGAATACGACACCAGCAGCCCTCGCAACAGAAGCATCCAAAGTTGGTATATTAAAATCGGAAATAAAACCAGAATCAAATGAGGAGATCAAATCAACTTTGGCAGCAAATGCAGATGGATTGGAACAGAAGACAACAAATTGA
Protein Sequence
MCDTAITVNSTATITSTGAIPNASGPQIPATIIATATKKETQRTPQNCCRLCIAPATECISIINSYAADKEPLTTKIYNCVNIKITSQDRLSQQICHACISYLNSWQSFKNRCLSSQSKQRQWLETSATTTTPPTTTSGSSLGCVLPLPPPKPLSMPPMAVATTSTYSTTSITPTPIPTPTPLLMPVTLQSATQQLRFFRRYSYNPLPAVPIKDEPIDDTEDDYQMKSIDESIDDMVDPTMFLERSELEGDVPLMTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPVTKPTPALAAALEIQRAAAAAATAEANRSGGNMSTQKYRQVVMNAFIKCEAGGYDYDNPEQYQSLLSRDKIEFIEQNAEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVMNALNNKQSDGVATVASSPAIVVPATVAAVSGSSTTTTTTSDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGLSSDNASSTTVSGANVDNSHSPGKKNLLCALGIGSADESRSATLPLNTSTPKPVGGGASSAASTTSASGGLLGGGTSASRDRDGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETSGSVAKKIRLDDSSNNSSLMGMAATQQKECPICNAVFSNNIGLSNHMRSHYTASANASASANASASTSASSSTNAALAAANRMTPKSLTITAAPPITAEVSQTVPPKKESATVLSSSSSTSHVQGLQFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECEICSILAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECCLCRKVFFDRQMLDNHMPTCNRKPITSTGAHQQQQPQQQQQHHQQDQLRRGLVVFKHKTGDDDEDEEDEDQLQQQAQLQLDDTTDDAADVSNSPAVAAASSSSTSAHVKIRIPEVACTICGARFIDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADPGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDSEATQLNNNNNNSMLHLRELHAVGLVPNQQQQQQLNSSHNQNQSQQQQQSHNSSGTSTTATTNKSLKRKRELKCDYCASTFISNNNLRRHMYELHKHEVSHLPEPPVIVVDELLSCRRCNLRFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVADKIIVTVSGATTSNTTPAALATEASKVGILKSEIKPESNEEIKSTLAANADGLEQKTTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00523881;
90% Identity
-
80% Identity
-