Dsal009996.1
Basic Information
- Insect
- Drosophila saltans
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018903575.1
- Location
- JAEIGH010000008.1:4276823-4284464[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-124 2.1e-119 398.9 28.3 1 299 30 320 30 321 0.99 2 2 0.045 1.2e+03 -0.9 3.7 210 241 340 370 322 394 0.53
Sequence Information
- Coding Sequence
- ATGGATAGTACAAGCGCCACCGGTCGACGGCGAAACAATACGCGAGTCAATGCCGAGGATAATGCTCTAGATCAAATCACAAAGGAGGCTGAAGCGCGTTTGGCAGCGCGTCGGCAAGCTCGGGCCGAGGCTCGTGAAATACGCATGCGGGAGCTTGAGCGCCAACAAAAGGAGCAAGAACAGAATGCCGACCGAGTCTTTGATATGCAAAACACCAGTGGCAGTGGAGACACAATTTCTACCCATCCTGCACGTCTTGTATACGGCGGTGGCCTTTTGAATGTAACCCGTGCCACAGCATCGCGTCGCAGTAGCGAGGATTCATTAGAAGATGAAAGCCGAAGTTTACGGGACATGAAACATGAGCTCAAAGACGTTGAAGAACGCTTCCGAAAAGCAATGATAACGAATGCTCAGCTAGACAATGATCGTGCCTCACAAACTTACGAAGTCAAGCTACTCAAGGACAGAAGCGAAACCATGCAGGAATCGTTGGCTCAGCTTCAGCGAGAGTACAAGGAAAAAATGCGCGAATATAATGCATTGAAACGTAACTTGGATCGCACCACTTTGGAGCTACAACTGGTTCAGGGCCAGTTGAATGAGCGCGATTCTTTGATAGCGGAACAGGGTCTTGTGATTGTAGCTATTGAGAATTCCGATGGCAGTGATGCCAAGCGGGCTCTAGTCAGTGTTGATAACGCCAATGTCTTAGCCTCTGTGCAGGGTTCGTTAGATGTAAGACTTAAAAAATTTAGCGAAGATAAACAACAGCTTCTTGCGGAGGTTAAGAAGCTTAATGATCAATTGGAAGAGTATAAACGTGACGGGAAAATAGGCCATGGCAGTTCATCGTATGGAACGTTCGGCTATGACGATGATTATGAGGCTCAGAGAGAAGCAAATAAAATAATTTCGGATTATAAGTATAAACTGCAAAAGGCTGAACAAGAAATTGCAAGTCTGCAGGCGAGCTTAGCACGTTCAGAAACTCAGGTTATACGATACAAGAGCACAGCTGAAGCAGCTGAGAAAGCGGAGGCCGAATTAAAAGTGGAACGGCGTAAACTGCAACGTGAGAACCGTGAAGTTTTGGAGCGACTGGAAGAAGCGGAAACAGCTAATAATCATTTACTGAAACGGCTTGATAAATTAAAAAATGCAAAGAGCGCAATCCTCAAGGACTTATGA
- Protein Sequence
- MDSTSATGRRRNNTRVNAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQNTSGSGDTISTHPARLVYGGGLLNVTRATASRRSSEDSLEDESRSLRDMKHELKDVEERFRKAMITNAQLDNDRASQTYEVKLLKDRSETMQESLAQLQREYKEKMREYNALKRNLDRTTLELQLVQGQLNERDSLIAEQGLVIVAIENSDGSDAKRALVSVDNANVLASVQGSLDVRLKKFSEDKQQLLAEVKKLNDQLEEYKRDGKIGHGSSSYGTFGYDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREVLERLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600311;
- 90% Identity
- iTF_00600311;
- 80% Identity
- iTF_00577774;