Dsal025920.1
Basic Information
- Insect
- Drosophila saltans
- Gene Symbol
- -
- Assembly
- GCA_018903575.1
- Location
- JAEIGH010000007.1:2594775-2596825[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-13 4.2e-10 39.7 0.0 3 45 357 399 355 399 0.97 2 3 0.021 63 4.0 0.0 27 37 428 438 427 443 0.89 3 3 8.6e-19 2.6e-15 56.4 0.0 2 42 465 505 464 508 0.93
Sequence Information
- Coding Sequence
- ATGAACAATCTAAAATGGATGGGGCATTCGGCCACAATAATGGACATTCAGCGCTCGCTACAAAACGACGATGAATCCTGTGAAGTTATCCTGGCAGCCAAAGATGGGGCAAGTGTGCGCGCACACCTCTTCGTTCTCAGCACATGCAGCGATCTGATGCGAAATCTTTTGGTAGATTTACCGCCAGGCCAGGAGGCAACCATTATTCTGCCCGATATTCGTGGCGATCTGTTAGAGAGTATGCTCTCGTTTATCTACGTGGGTGAGACAAGCCTGCCTTCGGCCTCGCTGACTGAATTTGTAGAGGCTATAAATCTACTGGGCATTAAGTCGGCTATAAGCTTTGAGTGCAACCCCACTTCTCTTAGCAGTTCAAATGTAGACACAGTAGCCGAAGGCACTCTAGCTGTGGAAGCGGCCAAATCAATTGGCGACTTGCAAATAGAACACGCTGAATTGTTAGATGAAGATGATGATGGTGGCTCACAAGGACATGGTTCTGGCGATGCTGGAGGAAACCCACTCCTGGGCGATTCTCAAGAACAGCAACAACCTGCTCAGAGTAATCGTTCCCTTGAGTACCTTGATGTTTACAGCGATCAGCCGAAGATTACCTATTCCATTGAGCATATGAGCGGCACATCCAGCGGCAATCAGTACATTCTAACAGAGAACACCGGCACTTTCACAATTTCTCAATCAGCTTCATCTATTTCTAAATTAGATCCATCCAATGTAGAAATAGCCGATGATGATGTAGAAGCAGATTGCAAGGACGAAGTTGAGGAACAGGAAACACACATGCTTGAAGAGGAATATGTGCCGGCAGATCCCTTAATTGGTTTGACTATTGGCACAGAAGCGGAAATGGGTGAGGCTGATGGCGAGGACGATGTTGACGGCGACGAAGACGACGGGGATGTAAATGATATAATGGAAATGCAAGTAAAATCAAATCCCACCAAATCAAAAGGTCGCCGAGGTGGTGCTCCAAAGGTAAAACGTCCCGTCGCCAAGCAACAACAGAAATACAGTGCCCTAAAGAACGAGACTAAAGATGGGATTACGGATGCTCTGGAATTGGCCGCTGATGCAGTACTTCGACTCCGTCTGAGTCTACAAAAGGCAGCTGATCGTTTTGACATATCAAAAACAGTTTTATGGCGCCGCGTGCGCCACAGTCCCGAATACATGCGCAGCAATCGTGAGAAACCCTCATTATCAGAGGCGTACGAACGCCTTAAAAACGGTGATTCGCTAAAAAGTATTAGCCATGATTTAAATATACCCATGTCGACGCTCCATCGTCACAAGGTGCGACTGGCGGCCCAGGGACGTTTGCCTGATTTTGTTGCCTGCCGTCGTCGTGATACTACACCCAAAGACGAACTACGCGACAAGCTTGCGAAAGCCCTGCATGCTTGCACCCACGAGGGCATGTCTCAGAATCATGCGGCGAATCTTTTCGAGATACCCAAGAGTACGCTCTGGCGTCACCTTCAACGTCACACAGCTGAAAAAGAACGTAAAGTAAAGTTGGAACAACAGGATGAAGATGATGACGATCTTCTTACCTAG
- Protein Sequence
- MNNLKWMGHSATIMDIQRSLQNDDESCEVILAAKDGASVRAHLFVLSTCSDLMRNLLVDLPPGQEATIILPDIRGDLLESMLSFIYVGETSLPSASLTEFVEAINLLGIKSAISFECNPTSLSSSNVDTVAEGTLAVEAAKSIGDLQIEHAELLDEDDDGGSQGHGSGDAGGNPLLGDSQEQQQPAQSNRSLEYLDVYSDQPKITYSIEHMSGTSSGNQYILTENTGTFTISQSASSISKLDPSNVEIADDDVEADCKDEVEEQETHMLEEEYVPADPLIGLTIGTEAEMGEADGEDDVDGDEDDGDVNDIMEMQVKSNPTKSKGRRGGAPKVKRPVAKQQQKYSALKNETKDGITDALELAADAVLRLRLSLQKAADRFDISKTVLWRRVRHSPEYMRSNREKPSLSEAYERLKNGDSLKSISHDLNIPMSTLHRHKVRLAAQGRLPDFVACRRRDTTPKDELRDKLAKALHACTHEGMSQNHAANLFEIPKSTLWRHLQRHTAEKERKVKLEQQDEDDDDLLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555765;
- 90% Identity
- iTF_00577699;
- 80% Identity
- iTF_00577699;