Dsal001452.1
Basic Information
- Insect
- Drosophila saltans
- Gene Symbol
- -
- Assembly
- GCA_018903575.1
- Location
- JAEIGH010000006.1:10998508-11005586[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.1e-12 2.4e-08 34.1 0.0 1 40 414 454 414 457 0.90 2 4 3e-13 9.1e-10 38.7 0.1 2 39 469 506 468 509 0.94 3 4 1.9e-16 5.7e-13 48.9 0.0 1 45 523 568 523 568 0.98 4 4 1.1e-19 3.2e-16 59.3 0.0 1 43 575 618 575 619 0.97
Sequence Information
- Coding Sequence
- ATGGGTTTGCTTCGCACCGCCGAGCAATTAAAAATCAAAGGACTTTGTGAGACAGCTGAAAATGCAGACGATTTAAATGATGCAGCAACTGCCACTATAACGGTGTCGGAGAACATACAACAGGCAGTTGTGGGTAATATAGTTAATGCAACAATAGTACCAGGCGAAGGCAACTCACCCACCGCAGTTGAACAGCAGCATCAACATCAACATCAGGTACAAAGTCAAACTCAGCAGGAGCAGCAGCAGTTAAGCGCCGCCTTTGGCAATACCGACAACCCATTGAGCGGGCAATTGCTTAGCTCGAGCAATTCAGTGAATGGTGAGCCGGCATCAAGGAAATCTCGGCCGAAACGCTCGAAGTCTTCAGATTTACAACAGCAACAGGAACACCATCAGCAACAGCAAACAATATTGATTCAGGGGCAAAATCAAACATCCATTGTGAGTTTGCATCAGACAGTGGACGGCAATTATATACCCGTGGGTGCCCCAGGGCCAGGTGAAGACTCGGACGTGGATAACGATCAAGAACTCGATCACGTGCACGAGCACGAGCACGACGAAGAGGTGCATGAGAATACAAAAAATATGACTAGTTTAGGCATGGGCATGAATGGCGGCCTATTAGGCGTACCCATGGGTTTTCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACACCAGTCACCGTAACGGAACACGTCGATCTCTCCTGTAATCCCAGCACAGATACGCGAGATCTATCAAATCCCACCGAACCGCTTGACATTGACAATCATTTGGCGCAACAAATCCATCGACTCGATCAATCTCCCATGCATTCAATAGCTCATCATCATACTGGCGATGAGAGCAACTCGAATTTGGTACAAGTTCAGCACATTAAAAGTGAACATGGAGGACATGTGACGCATTCGGATATTGGGGGGGCCACTGTTATGGAGATTGATCCGAGTCAAATAAAGCATGAGCCGGGCATGATAATTACGCCAGAGATTGTCAATATGATGTCCTCCGGTCATATGGATATGTATAATTCTGATACCAGCGAAGATTCCATGATGATTGCCAATGGCTCGCCGCACGATCAAAAGGAGCCGCACTATACAAATTTGGATCAAAAACATGGAATCCTTGGCGGCAGCAGCATTTGCGGCCCAGGTGGTGCTGGTGGTGGTGGTAGTGGTGGTGTTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGTATACCATCGACCACTCTGTGGCAACGTGCTCATCGCCTAGGTATCGAAACGCCCAAAAAGGAGGGTGGCACGAAATCGTGGAACGAGGATGCATTACAAAACGCCTTGGAGGCACTACGAGCGGGTCAAATATCCGCTAATAAGGCATCAAAAGCCTTTGGGATACCGTCATCGACCTTGTACAAAATAGCCCGACGCGAGGGAATTAGATTGGCAGCACCGTTTAATGCAGCTCCCACAACATGGACGCCGGAGGATTTAGAGCGCGCATTGGTGGCAATTAGAGCGGGTAATACGTCGGTGCAAAAAGCAAGTGCCGAATTCGGCATCCCCACAGGCACACTTTATGGACGCTGCAAACGTGAAGGCATCGAACTCTCGAGATCGAATCCTACACCATGGTCTGAGGATGCCATGAATGAGGCCCTGAACTCAGTTCGTGTTGGGCAAATGTCTATCAATCAGGCGGCCATTCATTATAACCTGCCCTATAGCTCACTCTATGGTCGCTTTAAACGTGGCAAATATGATGTTGTAACTAATACAAGTGGAGTGTCGTTATTAAATACCTCAGGCAATACAACTGGAAGCATTGAGATTATTGAGCATAGTCAGGAAAATTCGTTGCATATGTTACAACAACAGTTTCCGTACAGTCCATCACCGCATCCGCCAACGCCGCAGCATCATAGTACACCGCAACAGCATCACAGCAGCAGCTCCCAGCAAGGGCCGCCAACGCCGCAGCATATGCAGCAGCAGCATGTGGTTCATATGCAGCAACAGTCACCACATCAGGTCCATCATCAGCATATGCAACAGGATGTGGTTACCTCAAGCAGCCAAGTAGTTCATGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGGCGTAGGGACTGGTGTGCTAACAGGAATTCACAGTACGGCCTTCGGCAGTATATCAGCGTTGGTTAGCGGCGGTCCAGGACCAGCAGCTGGGCAAGCAACAACAACAACAGCATCAGCTCCACCACCTCATCCTCCGTCAACATTACCGACTGGCACCAGTAAAAGAAAGAAAGCAACCAAACAAAAGCGTTAA
- Protein Sequence
- MGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGEGNSPTAVEQQHQHQHQVQSQTQQEQQQLSAAFGNTDNPLSGQLLSSSNSVNGEPASRKSRPKRSKSSDLQQQQEHHQQQQTILIQGQNQTSIVSLHQTVDGNYIPVGAPGPGEDSDVDNDQELDHVHEHEHDEEVHENTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQVQHIKSEHGGHVTHSDIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQKHGILGGSSICGPGGAGGGGSGGVAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRAGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALVAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVTNTSGVSLLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQQHHSSSSQQGPPTPQHMQQQHVVHMQQQSPHQVHHQHMQQDVVTSSSQVVHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGTGVLTGIHSTAFGSISALVSGGPGPAAGQATTTTASAPPPHPPSTLPTGTSKRKKATKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555764;
- 90% Identity
- -
- 80% Identity
- -