Basic Information

Gene Symbol
-
Assembly
GCA_018903575.1
Location
JAEIGH010000132.1:2434-3368[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.6e-14 1.1e-10 42.3 0.1 23 89 129 189 111 189 0.81
2 2 2.4 4.7e+03 -1.4 0.0 71 86 231 246 218 247 0.69

Sequence Information

Coding Sequence
ATGTTTAAATGTAAATCGTGCGATTATAGCACAGGGATACAATCTAATCTAACGCGGCATGTGAAAAAACATGCAAAGGTGCATGAGGGCACATTCAAATGCGTTCTTTGCGAGTTTAAGACGTTTTCTTTGAATCGTCATCTGGCCACGGTGCACAAGACACCAAAGCCGGATGCACAACAGAGGCGAGAGTTAGAGCCACAGCCTATGCCTGTGCCGGAGATGGAGCCTCAGCTGGAAACGGAGCCAGAACCAGAGCCACAGTCTGTGCCCGTGACAGTTGAGACTGTAATTGCGCTCCAAGTCGACATAGGGCTAAAGTGGCAAAAAGAAGAATATGCCAAAAGGCATTTCTTTCAAAATTTAATGCCTGTGGAGGACACAGAGGGAATACTGAAAAATATTTCTGTATGCCTCTATAAATTGTACTCAGCCGTAGAAGCCCACGGTGGCTTTGACAAAGTAAGGGAAAAAAGTTGGCACGGCGTAGCCATATTCTGCCAAGTGCCTCCATTATTTGTGCAGAATCTTAGGAAAATCTATGAGAAATTCCTCTTGGCCTATGAGAGCCAGGAGTTCGAAAGGCTGCGCTATTTGAAAAGGAACAGTATCCCATATTGGTGGGATTACGGGGATTACATATCCTATACCATAAAAGCTGTGCCCAAACGACGGAAGCAGTATCATGCTACGACAAGACTGAACACTGTGATGGAGATTTATGAAAAATACTTCATACCGAGCTCTGGGACCACATTTGGCATAAAGGATTCCTGGATCTACGTTACGGGCCTGACGCCAAAAAAATTAGTACAAACTTTGGAGTCTACCAAAAACAATTCAACAATTGTGATTACTGATACTGATTTGTAA
Protein Sequence
MFKCKSCDYSTGIQSNLTRHVKKHAKVHEGTFKCVLCEFKTFSLNRHLATVHKTPKPDAQQRRELEPQPMPVPEMEPQLETEPEPEPQSVPVTVETVIALQVDIGLKWQKEEYAKRHFFQNLMPVEDTEGILKNISVCLYKLYSAVEAHGGFDKVREKSWHGVAIFCQVPPLFVQNLRKIYEKFLLAYESQEFERLRYLKRNSIPYWWDYGDYISYTIKAVPKRRKQYHATTRLNTVMEIYEKYFIPSSGTTFGIKDSWIYVTGLTPKKLVQTLESTKNNSTIVITDTDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00577562;
90% Identity
iTF_00577562;
80% Identity
-