Basic Information

Gene Symbol
-
Assembly
GCA_018151275.1
Location
JAECWY010002217.1:923126-924051[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.4e-12 1.3e-08 35.3 0.0 23 89 126 186 108 186 0.80
2 2 1.7 3.6e+03 -1.4 0.0 71 86 228 243 215 244 0.69

Sequence Information

Coding Sequence
ATGTTTAAATGTAAATCGTGCGATTATAGCACAGGGATACAATCTAATCTAACGCGGCATGTGAAAAAACATGCAAAGGTGCATGAGGGCACATTCAAATGTGTTCTTTGCGAGTTTAAGACGCTTTCTTTGACTCGTCAACACACACCAAAGATGGATGCACAACAGGAGCGAGAGTTAGAGCCACAGCCACAGCCTATGCCTGTGCCGGATATGGAGCCTCAGCTGGAAACGGAGCCAGAACCAGAGCCACAGTCTGTGCCCGTGACAGTTGAGACTGTAATTGCGCTCCAAGTCGACATAGGGCTAAAGTGGCAAAAAGAAGAATATGCCAAAAGGCATTTCTTTCAAAATTTAATGCCTGTGGAGGACACAGAGGGAATACTGAAAAATATTTCTGTATGCCTCTATAAATTGCACTCAGCCGTAGAAGCCCGCGGTGGCTTTGACAACATAATGGAAAAAAGTTGGCACGGTATAGCCATATTCTGCCAAGTACCTCCATTATTTGTGCAGAATCTTACGGAAATCTATGAGAAATTCCTCTTGGCCTATGAGAGCCAGGAGTTCGAAAGGCTGCGCTATTTGAAAAGGAACAGTATCCCATATTGGTGGGATTACGGGGATTACATATCCTATACCATAAAAGCTGTGCCCAAACGACGGAAGCAGTATCATGCTACGACAAGACTGAACACTGTGATGGAGATTTATGAAAAATACTTCATACCGAGCTCTGGGACCACATTTGGCATAAGGGATTCCTGGATCTACGTTACGGGCCTGACGCCAAAAAAATTAGTACAAACTTTGGAGTCTATCAAAAACAATTCAACAATTCCGATTACTGATACTGATTTGTAA
Protein Sequence
MFKCKSCDYSTGIQSNLTRHVKKHAKVHEGTFKCVLCEFKTLSLTRQHTPKMDAQQERELEPQPQPMPVPDMEPQLETEPEPEPQSVPVTVETVIALQVDIGLKWQKEEYAKRHFFQNLMPVEDTEGILKNISVCLYKLHSAVEARGGFDNIMEKSWHGIAIFCQVPPLFVQNLTEIYEKFLLAYESQEFERLRYLKRNSIPYWWDYGDYISYTIKAVPKRRKQYHATTRLNTVMEIYEKYFIPSSGTTFGIRDSWIYVTGLTPKKLVQTLESIKNNSTIPITDTDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00590749;
90% Identity
iTF_00590749;
80% Identity
-