Druf003564.1
Basic Information
- Insect
- Drosophila rufa
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018153105.1
- Location
- JAECXS010000111.1:14812696-14822762[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-82 7.8e-78 261.6 10.9 1 196 17 218 17 248 0.95 2 2 0.3 4.6e+03 -3.6 0.0 89 117 544 572 512 595 0.79
Sequence Information
- Coding Sequence
- ATGCGAGTCAATGCGGAGGATAATGCACTAGATCAAATAACAAAGGAGGCGGAGGCACGACTTGCAGCGCGTCGACAAGCTCGTGCCGAGGCCCGCGAGATTCGTATGCGAGAGCTGGAGCGCCAGCAAAAGGAGCTGGAGCTAACGGCTGACCGGGTGTTCGATATGCAAAGCACCACAGCCGGTGGCGCAGGTGGTGGCGATGCCCTCCTCTCGGCCCATCCCTCACGCCTCGTCTACGGCGGACTGATAAATGTGGCCCGTGCATCAGTGTCGCGGCGCAGCAGTGAGGACTCTCTGGAAGATGACGGCCGAAGTTTTCGTGACTTCAAGCATGAGCTTAAAGACGTTGAGGAACGGTTTCGGAAAGCGATGATAACGAATGCTCAGCTGGACAACGATCGTGCTTCCCAGGCTTACGAGGTGAAACTGCTCAAGGACAAGTGCGAAATTATGCAGGAATCGTTTGCCCAACTGCAGCGCGAGTTTAAGGAGAAGATGCGCGACTGCAATGCCCTCAAACGCAGCCTGGATCGCGCCAATCTCGAGCTAAAGTTAGTACAAGGACAGTTAAATGAGCGGGACTTGTTGATATCGGAGCAGGGCCTTCTGATTGTGGCTGTTGAGAATGAGGATGGCAGCGATGCCAAGCGGGCTTTGAAGCTGATGGAAGGTGCTCTGGGAAAACTGGACATCTCAAAAAATCACACTCATGGATTCATAGATTGCGACCTTATGCGAACCCGGGCTTCGTTTGAGCAGTTTATAGCCAGCGTTTGTTTCCACAACGAGGATGTGGATGACGCCAAGAACGGACTGCCCCAAGTGCTGCACTATTCGATAATTATGCCCTCCGAGTTGCGCAACTATGAACATACCTCGATAGGTCAATGCTGGACGCTGGGCACTTCACAAGTTGTGCCCAAAGTCTTGGAGCCCTCGGCGAAAATCGAGGATGATGGTTACTCGGAGTATCTGCAGGAGGGCTTCATGGCACTCCATACAAAGCTGGCGTTAGTCATCGTTCCAATTATGTGGTTCCTGGTGCAGTTGCCCTTTCTCTTTCACGAACAGCTCAAGTCCGACTTATCGAATGCCTTTAATATGGTGGCCTCTGTGTTTCTGTGCAATGTGGCTCTGAGTTGGGGACTAACGCACCTGATGGACATGGAGGACCATCCGGGCATTATACCTGTCATGGACGTCCTGACATCAGGAGCCGACCAGCACTTTGAGCTCAGCTTAGAGTTTACTGTCTTCGATCACCTGATGTTCTTCTGTACCTTACGCGGGCTGAAAATGCCCGAGGCCGACAGGGAAGTGAGGGCCTTCCTGCGCTCCATGCAAATGGAGGACGTGCAGGAGACCCGAGTGGGCAACCTGAGCATGGGACAGAAGCGTATCTTTCAGTCCCTATGTGCGTTCGCCGGTCGAACTGAGATTGTTCTTCTTGGCAAGCCCTTGGATGGCGTGGACGAGGCCAGGGCCAGGCTGTTCTATAACTTTGTGCAGGCAGAGAAGAGGAACCGAACCATTTTTGTCACCACGAATCGCTCATCAGTAGCGAGCGGCCTGGGCGATCGCATTGCTATTGTGTCAAAGGGTAGTCTGGTTTTTCTTGGATCGGAAAGAAAGATGTGTCACGAGCTTAATGATGCCTATCGATTGACTTTCTATGGCAAGGCCCAGTGTGATTTCGAAAAGGTGCGCCAGTTCCTGGAAACTGTCACTGCTGCTGGCGTTGAGCTCGAGTCCAAAATGGGCGACTCCGCAATTGTGCTACGGCATCGCGCCTTGATTGACATCCGAGGCTCCTTCTTTCTAATGTTGAAGGTCTTCCTGCCCACTCTGGTGACCATCTGGATGGCCCTATGCCTGCCATATCTTCATAGTTATCGCAAGTTGCTGGAGAAAAGTGCCTTTCCCGTTGATGATCGTGATCGTGGTGCTGTCACTCTGGTACAAGAAGGATTATCCATGAACGATGGACCCTTAAGATCTGCCTACAACAAGTACGTGGAAATGGGAGCCAAGAAAGTGGATGCGGACTTGGACATTACGAATATGCGCAACACTCGGGGAAGTGAGAACAACGTATTATCGCAGGATAAGATCCTGGCAACAGCCAAGTTTACAAGAAGCAAGGTCGATGCTCAGTTCAACAATTATTGGCTGAATACAGCCCCCCACAGTCTGGCCCTTGTGATGAATGCCCTGGCAGTGGGTTACGTTGGCGCCGATTCCGGAATACAGGTTAACCTAGACCCCTTGCCCTACTCAACAGTGCCTGCCGTGCGGCTGAATAGTGAAAAGTATAATATTACCTTGCTATTTATGAGCTCCGTGTGCTTTGCGTTTTGCTATATCTGGACCCTGCCCATGCTCTTTATGACCCTTGACCGCGACAGTCGCTTGAACTACATCGAACTGATTGCTGGAATGCAAACGCGCGTGTTGCTCGTTGCCATCTTGGTCTACGAGCTGATCGTATTTGTGATCTCCTTTCTCGCCTTACACCTGGCCATCATAGTCCTGCGGATCGACGCACTAATGGAAAGAAGAGGGTACCAGGTCCTAAGCTTGTTTGGCGCCAATGGATCGGGCAAGACGGTTATGATCAAAGCCATTCTGGGCATTTACTCGCCCAGCTCTGGCAAAGTGAGTGGCGTCAATAGGATCCCCTACCAGAGGACCAAGCCGGCCATTGGCAATCTAGCCGGCTATAGTGCTCAGGAGGTGAACATGATGCAGGAGCTGACGGTACTGGAGACTCTCAAGCTGGTACTCCGACTGCGGAGACGTCAAAAGGGCAAAGCCCTCAGAGAAGAGGCGATATTACTGTGCAAAATCCTGAACCTGTACCAGTTCCGGTATCACTTCCTCGCGTTCTTGAGCCAGGGTGTCCTGAAGCGGCTGAGCATTGGCCTCGCCCTGATGACCCATGCTGAACTCATCTTGCTGGACGATCCCTTTGCCAACCTGGACGTAATCACACAGCACGCCGTGCTCCAGTCCATACAGGATGCGTGTCGCCATGGCCACTGTGTCATCTATACCTGCTCCCACACCGATTTCCTAGCGCCGGCGCAGCGTTTGGCGGCGCTGGGCACCCATGGCTTCGTGGCTATCGGAGAGCGGCAAGAGATAACCAGGAACTACTACACATCGTACTATGTTATCGATACCAGGGTCTATTTGCCCGAACTTCAAGAGATGAATGCCAGGAAGCCGGAAGGGGCGGCCTCAAATGCTGACCCGGAAGTACAAAATAAAAGAAGGGCACGACGGAACTATCTTAAGGTGTCGGCTTTGGTAGAAAAGATATTTCCGGCTGCCATTATTAAGTGA
- Protein Sequence
- MRVNAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKELELTADRVFDMQSTTAGGAGGGDALLSAHPSRLVYGGLINVARASVSRRSSEDSLEDDGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMQESFAQLQREFKEKMRDCNALKRSLDRANLELKLVQGQLNERDLLISEQGLLIVAVENEDGSDAKRALKLMEGALGKLDISKNHTHGFIDCDLMRTRASFEQFIASVCFHNEDVDDAKNGLPQVLHYSIIMPSELRNYEHTSIGQCWTLGTSQVVPKVLEPSAKIEDDGYSEYLQEGFMALHTKLALVIVPIMWFLVQLPFLFHEQLKSDLSNAFNMVASVFLCNVALSWGLTHLMDMEDHPGIIPVMDVLTSGADQHFELSLEFTVFDHLMFFCTLRGLKMPEADREVRAFLRSMQMEDVQETRVGNLSMGQKRIFQSLCAFAGRTEIVLLGKPLDGVDEARARLFYNFVQAEKRNRTIFVTTNRSSVASGLGDRIAIVSKGSLVFLGSERKMCHELNDAYRLTFYGKAQCDFEKVRQFLETVTAAGVELESKMGDSAIVLRHRALIDIRGSFFLMLKVFLPTLVTIWMALCLPYLHSYRKLLEKSAFPVDDRDRGAVTLVQEGLSMNDGPLRSAYNKYVEMGAKKVDADLDITNMRNTRGSENNVLSQDKILATAKFTRSKVDAQFNNYWLNTAPHSLALVMNALAVGYVGADSGIQVNLDPLPYSTVPAVRLNSEKYNITLLFMSSVCFAFCYIWTLPMLFMTLDRDSRLNYIELIAGMQTRVLLVAILVYELIVFVISFLALHLAIIVLRIDALMERRGYQVLSLFGANGSGKTVMIKAILGIYSPSSGKVSGVNRIPYQRTKPAIGNLAGYSAQEVNMMQELTVLETLKLVLRLRRRQKGKALREEAILLCKILNLYQFRYHFLAFLSQGVLKRLSIGLALMTHAELILLDDPFANLDVITQHAVLQSIQDACRHGHCVIYTCSHTDFLAPAQRLAALGTHGFVAIGERQEITRNYYTSYYVIDTRVYLPELQEMNARKPEGAASNADPEVQNKRRARRNYLKVSALVEKIFPAAIIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -