Druf014004.1
Basic Information
- Insect
- Drosophila rufa
- Gene Symbol
- bab1
- Assembly
- GCA_018153105.1
- Location
- JAECXS010000085.1:15098493-15100131[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8e-18 1.1e-14 53.6 0.0 1 43 55 98 55 100 0.95 2 3 1.7 3.3e+03 -2.3 0.2 6 12 209 215 201 219 0.69 3 3 3.5 6.7e+03 -3.3 0.1 4 11 224 231 224 231 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCCTGGATGGGAGCCACCGGATCGACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGCGAGCGGGGTCCTCTGAAGTCCTGGCGCCCCGAGACCATGGCGGAGGCCATCTTCAGTGTGCTGAAGGAGGGCTTGTCCCTGTCGCAGGCTGCCCGCAAGTACGACATCCCGTATCCCACCTTCGTGCTCTATGCGAATCGAGTCCACAACATGCTGGGTCCCTCCATCGACGGTGGGCCGGATCTGCGGCCCAAGGGTCGTGGGCGACCGCAAAGGATCCTCCTGGGCATCTGGCCCGATGAGCACATCAAGGGCGTCATCAAGACGGTGGTTTTTCGCGATGCCAAGGACATAAAAGACGATAGTTTGGGCGCTCACATGCCGCCCTACGGTCGCCACTCGCCCGCGTTTCCCTTGCAGGACCTCCCACTGAGCTATCCGGGCGCTAGTGGCGCCCTAGCCGGGACTCCGAGCTCGCTGGCTTGTCCCAATGGCAGCGGTCCCCAGTCGGGCGTCGGCGGGGAACAGCACATGTCACAGGAAACGGCCGCCGCGGTGGCCGCCGTGGCCCACAACATCCGGCAGCAGATGCAGATGGCAGCGGCCGTGCAGCATCAGCACGGGGAGGCGGGGCCGCCGCCCGTTCCGCCCGGTTTGTTCAACCTGCCGCCCCATCCTGGCGTGGGCGTTGGCGTTGGTTCCGGTTTCGGTGCCAGTTCCAGTTCCTCCGCCTCCTCCTCCTCGTTGGTGGGTCAGCATCCGGCCAAGGCCAAGGGCAGTCCGCTGCGCAGCGAAACGCCCCGGCTGCACTCGCCGCTGGGCGATCTCGGCCTGGACATGGCCTACAAAAGGGACTTCTCACCCAGTCGCCTCTTCGCCGAGGATCTGGCCGAGCTGGTGGGCGCCAGCGTCTCGTCCTCCTCGTCCTCGGCGGCAGCGGGCGCCGGGAGTGTGGCGGCTCAGCAGGAGAGATCGGGTGGAGGCTCCTCGGCGGCAGCGGGCGGAGATGCGCCCAGCTCCTCGAGCAGCGGAGGCGCGGGCATCAAGGTGGAGCCCATCACCACCACTAGCGAGTAA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDIKDDSLGAHMPPYGRHSPAFPLQDLPLSYPGASGALAGTPSSLACPNGSGPQSGVGGEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPPVPPGLFNLPPHPGVGVGVGSGFGASSSSSASSSSLVGQHPAKAKGSPLRSETPRLHSPLGDLGLDMAYKRDFSPSRLFAEDLAELVGASVSSSSSSAAAGAGSVAAQQERSGGGSSAAAGGDAPSSSSSGGAGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00492155;
- 90% Identity
- iTF_00617561;
- 80% Identity
- -