Drub002794.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila rubida
Gene Symbol
srp
Assembly
GCA_035046165.1
Location
JAWNOF010000012.1:23289056-23301009[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-18 1.4e-14 53.2 2.6 1 35 751 784 751 785 0.97

Sequence Information

Coding Sequence
ATGACAAAGGTTAGCAAGAGCAAGGAAAAGGACAAAAGTGGCGTAGTTTCGCGGTTGTCCAGCGATTTATTGACGAATgctgcaaatatgaaaatttctAAAGCGATATCCAATACCAAGAAGCCGGTCTTGCAGAAGAtgataaataataatcagcAAAGTAACGCGAGTGAAAGTGttgacaacaaaatcaaaaCCAActatcagcatcagcagcagcaacaacagcagcagcaccagttGCAAcaagttgagcagcagcagcagcaaatttatgagcaacagcaataccTGCAACATCAAATCTtaacgcagcaacagcagcagcaacagcagcaggaacagcaacaacaacagcaacagcaggccaGCTGGTTAGCCTACAACAATTGTGCCTACGAtttgaccagcagcagcgcggcagcggcaacagcagcagcagcggccgccgctgcagttgcaactcagaacagtcaacaacaacagcagcagcagcagcagcaggagaagagCGATTTGTATGCATTGACGGCATCACCgcatttgctgcactttccttaccatccgcatccacattCGCATCTTTACGAGCAGCCGTTgagcgccagcaacagcacggATCCCATAATGCGCAACAACTTTGCGGTTTACAGCGTCTATGGCGGCGGGGGAGGCGGTGGCGCCATTTCGCCCAGCACACACGaccatcagctgcagcagcacgtgGTCGCTGtggcgacagcagcggcagccaattCGGTGAttgcacacaccacacacagcaCGCCCAACATTGATGACGTCATTCAGGATACGCTGAAGGACGAGTGCTTCGATGACAATCACAGTTCCAGCTACCACATGCTCACATCCGTGTCGGATCTGCAAGTGCTGAAGGAGGCCAATGCGGCCATTTATTCGATGACGTCTGAtcaactgctgcaacagcatcagcaacaccTGCATCACCATCAGCTGCCCCAGCACCAACatcaccagcaccagcaccagcagcagcaccaacagcaacagcaacagcagcagcagcacaatcaacatcatcatcacaacAACTCGGCCAGCTCGGTGGGTGGCGATTCACCGTCGCCGTCCCACACATTGTCCGCCCATGCCAGCGACGTGGCAACGTTGCACAGTTTCACGCAATTGACGAGTGCGCCGCCCAGCAGTGGGCTGCACCGGGATAGCTACAGCAGTCTTTCACCGGAGCACGGCAGCTTCTTTACTACACAGCTCAGCCCCGTGCTGCAGAGCAGCTCTGTCTATGCAGGTCCCCTGCTTGCCTCCGCCACCAATGGCTTGCAGTATGGCATGCAGGCGGTGGCCTCGCCTAcccacatgcaacagcaacatcaccagcaccagcagcagcaactgcagcaacatcatcagcatcacaACTCCACGAGCAACAGTCCAGGACCTGTGGGTCTGCTGCACACGAGCGGCTCAACAGCGACTGGAGGAGCCACAGCGCACAGTTCGCTGCTTGACGACGGCTATGGCTCGCCAAAGAGCAGCCACAGCGGTCACGGCGGGGGCGGTGGAGGCACCCTGCCCGCCTTCCAGCGCATTGCACCCACCAGTGGAGGTGCTGGGTATGGCAACGGCGTGGCCAATGGATCTGGCAGCAGTGCTGAACGTGCTGGCTACGCATCGCTGACCAATTACCGCACACAAAGCGATGCCTGGCCAGGTCATTATGAGCCAATTAGCTACGCGCCCAGTGGCAACAGTCAGGCGCAGTTGGGTGGCGGAGGCGCTGGAGGCGCGGCAGTGACCAATGTGATACGCAATGGAcgcgctgtggcagctgcggccgctgcagccgctgtcgATGGTGTTGCCACCGCCGGCGTCGATCCTGCCCGATTCCTGGCCGCCAATGCCGCACATCTATCCGCCTCGGCATCGTTAACAGCAACATTGCTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAGCTACCCATTTAATGTGGCCACAAGTAGCCGCAGTAAGGCAGCATCTACAATTGCCAACAGCGCTGCCGGCTCTGGTTCTGGTTCCGGTTCCAGCGCCGGTGCCGGTGCCGGACACGGCTCAACGTCAGCGACAACGACTTCAACGCCGCTCGACGACCACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGTGCTTCGAGACGAGCTGGCATGTCCTGCTCCAACTGCCAGACGAACTACACATCGCTGTGGCGCCGCAATCCGGGCGGAGAGCCCGTCTGCAATGCCTGCGGCCTCTACTTTAAGCTGCACAACGTGGTGCGTCCTCTGACCATGAAGAAGGATACGATACAGaaacgcaaacgcaaaccgAAGGGCACCAAGAGCGAGAAGTCGAAGAAGATGCGTGCCTCACAGGCGGCTGCACTGCTGGCGAGTAATGCCAGTGCATGCCACAATGTGGCAATGCAACTGGATGGACATGGGCAGCAAATGGATGTCAATGATGAAATGAAACCACTCACATACATGTCATATGCATCGCAGCAACAGTTAAGCACTGAGCAGCATTCATCGGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCTAACACAACatcccaacaacagcaacagcagctctgCGCTGGCCTGGACATGTCGCCCACATCCTCCTACCAAATGTCGCCCATTAACatacaactgcagcagcagcaacagcagcagcagcaatcgtgcagcatgcaacacTCGCCAAGCACGCCAACATCTGCCATGTCACAATCCATCTACTCAACGCCATCGCCCACTCAgctccacaacaacaataacaacaacacattgtttaaccataacaacaacaacaacagcagcaatgaaaataacaaacaaattattcaGAAATATCTGCAAGCTCAGCaattgagcagcaacagcagcagcaacaacaacaacagcagcaacagcgatcAACAATTGttggcacagcagcaacttatGCAGCACCTGATGCCGAACTCCAttacggcagcagcagctgcagcagcagcggcggctgcggcggcggcgatcAACACAGCGATCAAATCGGAGGcagccaccaacaacagcaacagcagcagcatcaccaccAGCAAACAATTAGCTgccatcacaacaacaacaacacagacaACGGCATCGAACACACTATCCTCACTGAgtctcaacagcaacagcagcagcagcaacattatcAGTCTGCAAAATCCCTATCAACAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCGCTGAGTGGACGCTCATCATCGCCATACTATCTGAATCACCTGACCGATGAGGAGCAGCCGACCATTATTAAAATGGAGCAACTGGAGCACCATCagcaagcacagcagcaacaacaccagcaacagcaacagcaacaacagcagcagcatcaacagcaacaacacgatgACATGCTGCTCAGCCGTTCCGCATCGATCGATGAGCACTACGAACTGGAAGCCTATCatcgtcagcagcaacagcagcagcaacacaatctgcagcaacagcaacagatcGCCAACTATGCGTTGCATGCtgttgcacagcagcaactacacgAATTTGGACGCAAATATGGCGTTGAGCGCGAGACTGTCGTCAAAATGGAGTAA
Protein Sequence
MTKVSKSKEKDKSGVVSRLSSDLLTNAANMKISKAISNTKKPVLQKMINNNQQSNASESVDNKIKTNYQHQQQQQQQQHQLQQVEQQQQQIYEQQQYLQHQILTQQQQQQQQQEQQQQQQQQASWLAYNNCAYDLTSSSAAAATAAAAAAAAVATQNSQQQQQQQQQQEKSDLYALTASPHLLHFPYHPHPHSHLYEQPLSASNSTDPIMRNNFAVYSVYGGGGGGGAISPSTHDHQLQQHVVAVATAAAANSVIAHTTHSTPNIDDVIQDTLKDECFDDNHSSSYHMLTSVSDLQVLKEANAAIYSMTSDQLLQQHQQHLHHHQLPQHQHHQHQHQQQHQQQQQQQQQHNQHHHHNNSASSVGGDSPSPSHTLSAHASDVATLHSFTQLTSAPPSSGLHRDSYSSLSPEHGSFFTTQLSPVLQSSSVYAGPLLASATNGLQYGMQAVASPTHMQQQHHQHQQQQLQQHHQHHNSTSNSPGPVGLLHTSGSTATGGATAHSSLLDDGYGSPKSSHSGHGGGGGGTLPAFQRIAPTSGGAGYGNGVANGSGSSAERAGYASLTNYRTQSDAWPGHYEPISYAPSGNSQAQLGGGGAGGAAVTNVIRNGRAVAAAAAAAAVDGVATAGVDPARFLAANAAHLSASASLTATLLDADFFTEGRECVNCVAAESGGDFYKSYPFNVATSSRSKAASTIANSAAGSGSGSGSSAGAGAGHGSTSATTTSTPLDDHEHVSRANSRRLSASRRAGMSCSNCQTNYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRASQAAALLASNASACHNVAMQLDGHGQQMDVNDEMKPLTYMSYASQQQLSTEQHSSAASSPQSMASSSLSPNTTSQQQQQQLCAGLDMSPTSSYQMSPINIQLQQQQQQQQQSCSMQHSPSTPTSAMSQSIYSTPSPTQLHNNNNNNTLFNHNNNNNSSNENNKQIIQKYLQAQQLSSNSSSNNNNSSNSDQQLLAQQQLMQHLMPNSITAAAAAAAAAAAAAAINTAIKSEAATNNSNSSSITTSKQLAAITTTTTQTTASNTLSSLSLNSNSSSSNIISLQNPYQQQALGQTEMPLCKSALSGRSSSPYYLNHLTDEEQPTIIKMEQLEHHQQAQQQQHQQQQQQQQQQHQQQQHDDMLLSRSASIDEHYELEAYHRQQQQQQQHNLQQQQQIANYALHAVAQQQLHEFGRKYGVERETVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00614566; iTF_00509479; iTF_00521008; iTF_00562840; iTF_00595614;
90% Identity
-
80% Identity
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