Basic Information

Gene Symbol
srp
Assembly
GCA_963583835.1
Location
OY757142.1:21696773-21709219[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-18 8.8e-15 54.0 2.0 1 35 1014 1047 1014 1048 0.97

Sequence Information

Coding Sequence
ATGACAAAGGTTAGCAAGAGCAAGGAAAAGGATAAGAGTGGAGGGGTTTCGCGGCTGTCGAGCGATTTATTGACGAATGCTGCAAATATGAAGATATCCAAAGCGCTCTCCAACACCAAGAAGCCGGGCCAGCAGAAGGGTATGGGCGACAAGGCGAAAGGATCAACAAATGCAAAGGCCACAGCTGTGTTCGCATTCGGTCAAGCGCAACAGTCGGTTGCTGCGAAAGAGACGGCAATAGAGGCGCAGGagaacgacgacggcgaccgCGACCGCGACAACGACGCGCgtaggcaacaacagcagataCAGCAAGCGAAAGCAGCGACGCCGAAGCcgacgttgtcgtcgtcgtcgttcttgtcgtcgttgtcgccgcTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCAGACATCAGTTGCCAGTGAAACAGCGAAGCAAACGGTTACCACGACCCAAGCAACCGCACCATCTACAATTCGAGTACccgaaacaataacaacaacgatcAGTGCGGCAGCGTTGAATGAGTTTGTTTATGATGAGAACATAAGGCAGCAGCatccgcaacaacaacagcaacaacagcaacaacattcagGCAACAGTCCAGGCAAAGTTGTTGGCGACGAAACGGCAATTGGCAATAAAGATCAAGCCGAGTCCAGAACAGAGAGCGAATTGAAGCtagagacaacaacagcagcagcagcagcagtagcagcagaaGTAGCAACTAGcgataaatattacaaaatcgtTGATAAGTGTAAAAGTGAGATAAGTGACGAAagcacggcaacaacaacaacaacaacaacaacaacagcaacaacaacatcagcaatagcaacaaatttGCCGGTTGTAgtgataaataataatcagcAAAGTGACGCGAGTGAAAGTGTtgacaacaaaatcaaaaCCAActatcagcatcagcagcagcagcagcagcagcagcagcaacagttgcaacaagttgaacagcagcagcaaatttaTGAGCAGCATCAATTCCTGCAACATCAAATCTTaacccaacaacagcagcaacagcagcagcaacaacagcaacagcaggagcagcaacagcaacagcaacagctcgcAAGTTATTTGGCTTACAACAATTGTGCTTACGATCTGACCAGCAGCAgcgcggcaacagcagcagcaagtgcagcagcagcagcagcagcagtagctgcAACGCAGAACagtcagcaacatcagcagcaacagcagcaggagaagACCGAATTGTATGCATTGACGGCACCACAGCATTTGCTGCACTTTCCTTACCaccattcgcattcgcattcgcatctCTACGAGCAGCCGTtgagcggcagcaacagcacggATCCCATAATGCGCAACAACTTTGCGCTATACAGCGTCTATGGGGGCGGAGGTGGAGGAGGCGTTGGTGGCGCCCTTTCGCCGAGCACACACGAgcatcagctgcagcaacatgttgttgctgtggcaacggcagcagccgcCAACTCGGTGATcgcacacaccacacacaacaCGCCCAACATTGACGAGGTCATCCAGGACACGCTGAAGGACGAGTGCTTCGATGATAATCACAGCTCCAGCTATCACATGCTGACGTCCGTGTCGGATCTGCAAGTGCTGAAAGAGGCAAACGCCGCCATCTATTCGATGACGCACGATCaattgctgcaacagcagcagcaacacctgCATCACCACCAGCTGCCACAGcaccaacatcagcagcaccaacagcagcagcagcagctgcagcagcagcagcagcatcaacatcacCATCACAACAACTCGGCCAGTTCGGTGGGCGGCGattcgccgtcgccgtcgcacaCGCTGTCCGCCCATGCCAGCGATGTGGCAACGCTGCACAGTTTCACGCAGCTGACGAGTGCGCCGCCCAGCAGCGGTCTGCACAGGGATAGCTATGGCAGCCTGTCGCCGGAGCACGGCAGCTTCTTCACCACACAGCTCAGCCCCGTGCTGCAGAGCAGCTCCGTCTATGCAGGTCCTCTGCTTGCCTCCGCCGCCAACGGCATGCAGTATGGCATGCAAGCAGTGGCCTCACCCACCcacatgcaacagcaacaccaccagcaccagcagcaacagcagcagcagcagcaacagcaactgcagcaacatcatcagcatcacaACTCCACGAGCAACAGTCCCGGTCCTGTGGGCTTGCTGCACTCCAGCGGCTCAACAGCCACTGGAGGTGCTGCCGGGCACAGTTCGCTGCTGGACGATGGCTATGGGTCGCCGAAGAGCAGCCAcagtggcggtggcggtggcggtggtggCACCTTGCCCGCCTTTCAGCGCATCGCACCCGCCAGCGGAGGTGCTGGCTATGGCAACGGCGTGGCCAATGGATCTGGCAGCAGCGCCGAACGCGCTGGCTACGCATCGCTGACCAATTACCGCACACACAGCGATGCCTGGTCAGGTCATTATGAGCTGCCAATTAGCTACGCGCCCAGCGGCAACAGTCAGGCGCAGTTGGGTGGCGGAGGAGGCGCTGGCAGCGCTGCAGTGACCAACGTGATACGCAACGGACGcactgtggcagctgctgccgctgcagccgCTGTCGATGGTGTTGCCAATGCTTGCGTTGATCCTGCACGCTTCCTGGCCGCCAATGCCGCACATCTATCCGCCTCGGCATCGTTAACAGCAACATTGCTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAGCTACCCATTTAATGTGGCCACAAGTAGCCGCAGTAAGGCAGCATCTGCAAATGCCACCAGCGCTGCCGGCTCTGGTTCTGGTTCCGGTTCCAGCGCCGGTGCCGGTGCCGGACACGGCTCAACGTCAGCGACAACGACTTCCACGCCGCTCGACGACCACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCATCGAGACGTGCTGGCATGTCCTGCTCCAATTGCCAGACGAGCTACACATCGCTGTGGCGCCGCAATCCTGGCGGAGAGCCCGTCTGCAATGCCTGCGGCCTCTACTTTAAGCTGCACAACGTGGTGCGTCCTCTGACCATGAAGAAGGACACGATACAGAAACGCAAACGCAAGCCGAAGGGCACCAAGAGCGAGAAGTCGAAGAAGATGCGTGCCTCACAGGCAGCCGCGTTGCTAGCCGGTAATGCCGGTGCATGCCACAGTGTGGCAATGCAGCTGGATGGCCATGGGCAGCAAATGGATGTCAATGATgAAATGAAACCACTTACATACATGTCATATgcatcgcagcagcagctccagcagcaacagttaaGCACTGAGCAGCATTCATCGGCGGCCAGTTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCCAATGCCACgtcccaacaacagcagcagcagcagcagctctgtGCTGGCCTGGACATGTCGCCCACTTCCTCCTACCAAATGTCGCCCATTAacatgcaactgcagcagcaacagcagcagcagcaatcatgCAGCATGCAACACTCACCTAGCACGCCAACATCTGTCATGTCACAATCCATATACTCAACGCCATCGCCCACCCAGcttcacaacaacaataacaacaacaacacactgtttaaccataacaacaacaacaacaacagcagcaatgaaaataacaaacaaattattcaGAAATATCTGCAAGCTCAACaattgagcagcagcagcagcagcaacaacaacaacagcagcagcagcagcaacagcgatcAACAATTATTGGCACAGCAGCAACTTATGCAGCACCTGATGCCGAACTCCAttacggcagcagcagctgcagcagcagcggcggctgcggcggcggcgatcAACACAGCGATCAAATCGGAGGCaaccaccaacagcagcaacagcagcagcagcacctccACCAGCAAACAGTTGGCTgccatcacaacaacaacaacacagacaACGGCATCGAACACACTATCCTCACTGAgtctcaacagcaacagcagcagcagcaacattatcAATCTGCAAAATCCCTATCAACAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCGCTGAGCGGTCGCTCCTCGTCGCCCTACTATCTGAATCACCTGGCCGATGAGGAGCAGCCGACCATCATTAAAATGGAGCAATTGGagcatcatcaacagcaacagcaacagcagcagcatcagcaacatcaacagcagcaacacgaTGACATGCTGCTCAGCCGTTCCACATCGATCGATGAGCACTATGAACTGGAAGCCTATCAtcgtcagcagcaacagcagcagcaacagcagcagcagcaacagcaacaaattgccAACTATGCGCTGCATGCTGtggcacagcagcaactacaCGAATTTGGACGCAAATATGGCGTTGAGCGCGAGACTGTCGTTAAAATGGAGTAA
Protein Sequence
MTKVSKSKEKDKSGGVSRLSSDLLTNAANMKISKALSNTKKPGQQKGMGDKAKGSTNAKATAVFAFGQAQQSVAAKETAIEAQENDDGDRDRDNDARRQQQQIQQAKAATPKPTLSSSSFLSSLSPLATANLSSTFESKAQTSVASETAKQTVTTTQATAPSTIRVPETITTTISAAALNEFVYDENIRQQHPQQQQQQQQQHSGNSPGKVVGDETAIGNKDQAESRTESELKLETTTAAAAAVAAEVATSDKYYKIVDKCKSEISDESTATTTTTTTTTATTTSAIATNLPVVVINNNQQSDASESVDNKIKTNYQHQQQQQQQQQQQLQQVEQQQQIYEQHQFLQHQILTQQQQQQQQQQQQQQEQQQQQQQLASYLAYNNCAYDLTSSSAATAAASAAAAAAAVAATQNSQQHQQQQQQEKTELYALTAPQHLLHFPYHHSHSHSHLYEQPLSGSNSTDPIMRNNFALYSVYGGGGGGGVGGALSPSTHEHQLQQHVVAVATAAAANSVIAHTTHNTPNIDEVIQDTLKDECFDDNHSSSYHMLTSVSDLQVLKEANAAIYSMTHDQLLQQQQQHLHHHQLPQHQHQQHQQQQQQLQQQQQHQHHHHNNSASSVGGDSPSPSHTLSAHASDVATLHSFTQLTSAPPSSGLHRDSYGSLSPEHGSFFTTQLSPVLQSSSVYAGPLLASAANGMQYGMQAVASPTHMQQQHHQHQQQQQQQQQQQLQQHHQHHNSTSNSPGPVGLLHSSGSTATGGAAGHSSLLDDGYGSPKSSHSGGGGGGGGTLPAFQRIAPASGGAGYGNGVANGSGSSAERAGYASLTNYRTHSDAWSGHYELPISYAPSGNSQAQLGGGGGAGSAAVTNVIRNGRTVAAAAAAAAVDGVANACVDPARFLAANAAHLSASASLTATLLDADFFTEGRECVNCVAAESGGDFYKSYPFNVATSSRSKAASANATSAAGSGSGSGSSAGAGAGHGSTSATTTSTPLDDHEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRASQAAALLAGNAGACHSVAMQLDGHGQQMDVNDEMKPLTYMSYASQQQLQQQQLSTEQHSSAASSPQSMASSSLSPNATSQQQQQQQQLCAGLDMSPTSSYQMSPINMQLQQQQQQQQSCSMQHSPSTPTSVMSQSIYSTPSPTQLHNNNNNNNTLFNHNNNNNNSSNENNKQIIQKYLQAQQLSSSSSSNNNNSSSSSNSDQQLLAQQQLMQHLMPNSITAAAAAAAAAAAAAAINTAIKSEATTNSSNSSSSTSTSKQLAAITTTTTQTTASNTLSSLSLNSNSSSSNIINLQNPYQQQALGQTEMPLCKSALSGRSSSPYYLNHLADEEQPTIIKMEQLEHHQQQQQQQQHQQHQQQQHDDMLLSRSTSIDEHYELEAYHRQQQQQQQQQQQQQQQIANYALHAVAQQQLHEFGRKYGVERETVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00589913;
90% Identity
iTF_00509479;
80% Identity
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