Drub012754.3
Basic Information
- Insect
- Drosophila rubida
- Gene Symbol
- hang_1
- Assembly
- GCA_035046165.1
- Location
- JAWNOF010000023.1:16234616-16250379[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.37 22 5.6 1.0 3 23 533 554 532 554 0.93 2 18 0.47 28 5.2 3.2 3 22 661 680 659 680 0.89 3 18 0.0008 0.047 13.9 3.3 1 22 782 803 782 805 0.90 4 18 0.093 5.4 7.5 0.1 2 21 817 836 816 837 0.93 5 18 0.00093 0.055 13.7 0.2 2 23 999 1021 998 1021 0.95 6 18 0.0027 0.16 12.3 0.1 1 23 1029 1052 1029 1052 0.96 7 18 2.2e-05 0.0013 18.9 0.1 2 23 1138 1159 1137 1159 0.97 8 18 0.00038 0.023 15.0 2.9 2 23 1257 1279 1256 1279 0.97 9 18 0.03 1.8 9.0 0.2 2 23 1288 1310 1287 1310 0.95 10 18 0.0018 0.11 12.8 0.3 1 23 1323 1346 1323 1346 0.97 11 18 0.00027 0.016 15.5 0.8 1 23 1399 1421 1399 1421 0.99 12 18 0.0026 0.15 12.3 0.9 1 23 1429 1452 1429 1452 0.96 13 18 0.054 3.2 8.2 0.4 2 19 1460 1477 1459 1478 0.94 14 18 3.5e-05 0.0021 18.2 0.4 3 23 1572 1592 1571 1592 0.98 15 18 0.0021 0.12 12.6 0.1 1 23 1627 1649 1627 1649 0.97 16 18 0.00079 0.047 14.0 0.6 2 23 1735 1757 1734 1757 0.93 17 18 0.0086 0.51 10.7 0.3 3 23 1813 1833 1813 1833 0.98 18 18 4.9e-05 0.0029 17.8 2.5 1 23 2287 2309 2287 2309 0.99
Sequence Information
- Coding Sequence
- ATGTGCGACgctgccgcaacaacaacatcgttAACAgttggaggaggaggaggaggaaccGTTGGAACTGGTGACACAGCAGCGACATCTATGgatgaacagcagcaggcggagcgTCAGCGACAAAGCTGCTGTCGCCTGTGCATTGCGCCCGCCAGCGAATGCATATCGATCATCAATAGTTATGCAGCCGATAAGGAGCCACTGGCCACAAAAATACATAACTGCGTAAATATCAAGATCACATCATCGGATCGCCTATCGCTGCACATTTGTCACGCCTGCATCAGCTATTTGAACTCGTGGCAAAGCTTCAAGAATCGCTGCCTCAGCTCACAGACGAAGCAACGCCAATGGCTGGACACCGACCGCATCAAACAGCAGACGCTGCTCGGCTACTTGGATTTGAATCGGGCCGAGAATGGTGGCGGCGTCGCTGTTACagttgagcaacaacagcaagctgCCGAATTGAAAAatgatgcagcagctgctgagaAGGCGTCCGCGAACATTTTGGATGGCATACCGTCGCTGAAGAAGCGCAAATCGTTAACAGTCTATGTGAgtcccaagcagcagcaactgcaactgcaactgcagcaacaacaacaacagcagcaaacgacggcaagagcagcggcagagcagccacagcaacaaacttTGCAGACCCTTTTATTGCAGGTGCCCTCCACGTTCAGCACAACGCCGGCAATGGCAACGTCGCaaacccagcagcagcagcgcaagtatcaacagcaacaacgcgtCAAGCAGTCGTTGTcccatcaccatcagcatcatcatcaccatcaccaacagcagctgcaactgcagcagcgacatcgCCGCATTCGCCAGCCGCGCCGGCAAGTGGCGCCATCTgttgctcagcagcagcagcagcgtttgtCCAAGTTGAAGCCCAAAGTCTATTTACCGTTGGACATCGCAGTCCCGCCATTGCCGCCGATACCGATACCGATGCCGATAACAACGCCTGTGTTACCgtccgctgttgctgcttcgactgctgctggcgagACGGCGGCTGCttcgttgccattgccgttgtcgacgctgccgctgcccattGATTTCAGCCAGTGTAAGAATCAGAATCCGAATCCGTCTCAAAAAGTTAGCGGCGGCAACATGgtcttgccgctgccacttccgccgccgccgccgccgctgccgtcgtcgtcggttgccacaatgagcagcagcagcagtggcaatgtcgtcgctgctgctgcgtcaacgtctgccgctgccgctgccactgcgacaacaacaacagcagtaacgacgccgctgctgatgccgCCGCTGCCCGCCGTGCCCATCAAGGATGAGCCGCTGGACGACACGGACGATGACTTTCAGATGAAGTGCATCGACGAGTCCGACGACATGATGGATCCCACTATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTGCCGCTAATGACCTCCGACTATGATTATACGGCGCAGCACGGCGTGACGGCGGCCGTGGCGGCGGCATCGCTGCCGGCGAGCGCCGTGGCCAACGTGGCAGCCGCCGGCGACTCGAAAGTGGCCAGCTGCCGGGCCTGCAGTCTGCAGTTCTCGACACGCGCAAATGCGCGACGCCACGAACGCAATCTGCACCCGAACCTGTTCCAGCTGTCCACCGACTCGCCCAACAACACGCCCATCACGAAGCCGACGCCGGCACTCGCCGCCGCCCTGGAGATTCAGCGTGCCgccgcagcggcggccgcaACGGCGGAGGCAACGAAGGCGGCGGCCGGGGGCAACATCTCGACGCAGAAGTACCGGCAGGTGGTGATGAACACGTTCATCAAGTGCGAGAACGGCGGCTACGACTACGACAATCCGGAGCAgtaccagcagctgctgacgcGCGACAAGGTCGAGTTCATACAGGAGAACAACGAGTTTCTCGAGCAGTACCAGACGATGACGtgtcgctgctgcaacaaGTACTTCAGCACCTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTACCCGATGTTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTCTTCATCTCGCACTTGAAGAAGCGCAACTGCATCAACCTGTACCGCGTGCTGCACGCCCTGCGCCTCAAGCAGCCCAACTTTGCGCACGCCAACGCCGCCGGCGTGGtggccaccaccaccagcggCATCACGGAGCCACAGTCGAGCCAActgtcgcagctgcagctgcacgacACATCGTCGCCGTCGGAGCGGCCGGAGAAGCTGCGCGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTGTGCCCGAAGGGCTTCCGCACCAAGCACGAGTTCCGCACCCATGTGTACGACAAGCATGCGGACGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGCTTCTGCGGCCTGGACTTTGCCGATCCCGTCGACCGGCGACGCCACTACAACAACATGGACTGCATTGTGCGGCTGCGTTGCATGACCTGCGACGCCAAGCTGGAGACGCACCAGCGCTTCCTCGACCACGTCTACCAGGACCACCTGGGCGGCGtgagcagcggcgacaacgcATCGACGGCCAACAGTGCGCTCGACCATTCGCCCGGCAAGCGCAGTCTGCTCGGCGCCCTCGGcatcggcgttggcgtcggcgtcggcatcaGCCACTCCTCCAACGACGAGTCgcgcgccagcagcgccaccaCCAACCTCAACCTTAGCctcagcaccagcaacaacaacaacaatagtctAAGCAACAGcactgctgcgactgcggctgctgtgctggGCACGCCGTTGACCTCGACGCCGTCGAAGCCGACGCCCAATTCGGCGGGCAGCTCGGCGAATCGCGTGGGCAGTGGAGCTGgaggtggcggtggcggtggcgacTCGGCGCCCAAGTCGCAGTATTTCTCGCGCATGCCGCAGGTGTGCCCGATCTGCGGGCAGCagtacaacaactacaacaacgtgCTGCGCCACATGGAGTCGAAGCACCCCAACAAGCTGCCCGAGACGTACAAGTGTGTGCGCTGCGGGCTCGGCTATCCACGGATCTCATACCTGCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCATTCCGGCGGCTTCGAGTACATCGTGAACGCGGACGCCGTCAAGCTGGCCGACGGCAGCACGCCCAACGTCTACACCGGCCGCTACGACTATGTGATGAAGGATTTGATGTCCATAACAAATGGTGGGACACTCGatgacgacgacgaggagacCGGCAGCCTGGCCAAGAAGATACGCCtggacgacagcagcaacaacagcagcatcaacacgAGCATCGCCAACCAGCAGAAGGAGTGCCCCATCTGCAACGCGGTgttcagcaacaacatcggcCTCTCGAACCACATGCGCTCCCACTACACGGCCTCCTCGACGGCCACCAACGCTGCGCTGGCGGCCGCCAATCGCATGACACCCAAATCGCTGACCATCacagcgacgccgccgctCGAGGCGACGGCAGCCGCCGTGGCCGGCACAAACAGTGCAGCTGCCTCGCCGGCGGGCATGGCAAGTGGCACAGCGGCAGCCGGCGGTGGACAGGCGGGCGGCAAGGTGCCACCGGCCATGGTGCACCAGACGCCGCAGGAGCAGGCCGTGTTCAGGCGCAGTCTGGATCAGGCGGCAGATCGACGCTTTCGCCGCATGCGCTGTCGCATCTGCCAGCGGCGTTTTAGCTCGAAGAAGTCGTATCGCTACCACATGCTGACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCCGAGTTCGCCTACGAGAAGGGCCTCAAGGTGCACCTGTTCAAGGTGCACGGTCGCGCGATCAAGGACGAGATGATCGTCAAGCAGTTCGAGTGCGATGTCTGCTCCACGGTCTACAGCtccgagctggagctgcagcagcacaagcgcAGCGTCCACAAGTCGACCACCAACTCCAGCAACGCCACCAGCACAAAGAGCGCCaccacaacgacagcagcagcgacggccgCGGCAACGATCGCGGGCAGCTCGACGGCAGCCGCGGGTGCGGAGCTGGCGGGCGAGACGTCGCTGGTGCTGCCGCTGTACTGGTATCAGTGCAAGTACTGTCCGTCCAACTTCGACACCAACAAGAAGCTGGCCATCCACATCAATTCGCACGACGAGTTCGACTCCAACGACTACTCGTGCAAGGACTGCGGCAACGTCTACAGCGGCCGCAAGAGCCTCTGGGTTCATCGCTACAAGAAGCATCCGCAGGTGCCGGACCCGGTGGAGTGCACGCTGTGCCGCAAAATGTTCTTCGACCGCCAGATGCTGAACAATCACACGCCCACCTGCAACCGCAAGCCCATCACGGCCACCGGCGCCCACCAGCAGgacgtccagcagcagcagcagcagcagagggagcacctgcagcagccgcagcgcggCATCTTCAAGCACAAAAcgggcgacgacgacgacgaggacgaggacgacgaccagctgctgctgctcgacgatgCGGGGACAACAACTggcgcggcagcagcgcccGCTGTGGCAGGCGATGGGGGGAATGCAGCGTCGCTGGCGGGCATCAAGATACGCATACCGGAGGTGGCGTGCACCATCTGCGGGGCACGCTTCACCGACCAGGAGATGTTCACGAAGCACATACAGAAGCACGAACAGGAGCTGTACGTGGACAACCCACTGGCGGCGATGTTCGACGACGGGCCCGCCGACGCGGGCCAGTTTCAGGTGGAGCGCCAGAACGAGAACGGCGAATACGCGTGCGATTTGTGCGCCAAGACGTTTTCGCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCATCGACGGCGAAGCGACAACgctgaacagcagcagcaacagcaacaacaacaacaacaactcgatgCTGCATCTGCGCGAACTGCATGCGGTGGGTCTGATGcccaaccagcagcagcagcagcagaagcaacaacagcagcagcagacgagccagcaactgttgcagcaacagcagcagcagcagcagcagcggagcaAGTCGCTGAAGCGGAAGCGTGAGCTGAAGTGTGAGTACTGCGCCTCCACGTtcattagcaacaacaacctgcGTCGCCACATGTACGAGCTGCACAAGCACGAGGTCAACAATCTGCCCGAGCCGCCGGTGATTGAGGTGGACGCGCCGCTCAGTTGTCGTCGCTGCGGCGACCTGCAGTTCGCCTCGAAGGAGGCGTGGATCGAGCACAAGCTGGCCGACGCCAAGGTGGTGCGTCCCTTCTGTCCATTCCAGTGGGGCTGCGATCTGTGCGGCGAGTACTTGTCGCGCAAGGAGAAGCTCATCAATCACATCAACAATCACCTCAAGGAGGAGACGATCGTGCCCGTTGCCGTGGCGGCCAAGCACAAGCTCGACACGGTCACCGCAGCtccagctggagcagcaacagcgcccgAAGAGccaactgccacagcagcaacaacagcaacggcgacggcgacggcgacagcagccacaacagcaacgacaacaacaaaggctgCAGCGACAGCCGCTGGGGCAGCGCTCAAATTGAAGGCGAAGAGCGagacaacgacggcaactgAGGCGGGCAAAGCGGCGGCTGGGCAGGAGGAGGACAGCGAGCTCGAGGATGACAGTGAtagcgacgacgatgacgacgacgaggagggggaggaggacAGCACGAGTgccgacgatgatgatgacgaggacgtcgacgatgacgaggaggacgacgaggtCGAGGACGATGAGGATGCCGCTGCAgtcaagcggcagcagcaacgacaccacaacaacaacaacaacaacaacaaagccggtggtaacaacaacaacaacaacaacaacaacagcgccttGGATGAGGATGATCTGATCGAGGAGGTCATCGAGGAGATCGACGACgcagaggaggaggagcagcaggtcGAACGTGTTGGCGGCAAGAGCAagccgacaacgacaaagcGTCACAACTTCGAGTACAACGAGGCCAAGTtgaacggcaacagcaagcagcagacgcGGCACAGCTCCGAGGAGGACGAAGAGgtggatgatgatgacgacgaggacgatgacgatgaggatgacgacgaTTTGGAAATGGACGAGGGACAGGTCGACGGCGGCGTCAGTGTCGCTGTCGGGGAAGGCATGACCATTGATGATATTATCGAGGAGGACGATggcgaggacgacgatgaggaggacgatgatgatgaggagcATGCCCAGCATCTGGTGGCCGATCATGTGGTGGCcgaggacgatgacgacgacgacgacgacgatgatgatgacgttgtGGATGAcgtcgatgacgacgatgatgtgGATGACGTCGATGACGTCGATGACgtggatgatgatgatgtggatgtggatgagGATGATGATATCGATGAGGATGACTTCGATGACgaacagcagccagcggcTATGAGAAGCAATGCTGCACTTCGTCGTCGCgtggacgatgacgacgacgacgacgacgatgatgatgatgatgatgttgtgaTGGATGtggatggcgacggcgacggcgacggtggcacatcgtcgtcgtcggagaGCGAGTCGACAACGACCACGTCGCAGTCAACTGGTGAGCGgcgcaataaaagcaaaactgtAGTTTCATCATCAGCGGCATCAGCGGCCGCTGCTGATCACTCTAATAATTCCAGCTATACGTGCGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCAACTGCAGACTCACATTAAAAGCCACTTCCTCAACGggccaacaacgacagcgggcggcggcaacggcggcggcggcagcagcgccgctAGCCGgggcagccaaagcagcaacattcaccaaagcagccgcagcaggaGCACCAcctccagcaacagcaacagcaacagcaccaacaacaacaacaatagcaacaacaatcacaaccacaaaagcaaaaccaaaaaagagacagcaacaacagttgcctcagcagcagccgcatcagcgactgcggcggctgcagctgcgacggcggcagcgacggcgacggcaactgcagctgcgacCGCCGCGGATGCTGATGCGAGCTTGAACTGA
- Protein Sequence
- MCDAAATTTSLTVGGGGGGTVGTGDTAATSMDEQQQAERQRQSCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITSSDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDTDRIKQQTLLGYLDLNRAENGGGVAVTVEQQQQAAELKNDAAAAEKASANILDGIPSLKKRKSLTVYVSPKQQQLQLQLQQQQQQQQTTARAAAEQPQQQTLQTLLLQVPSTFSTTPAMATSQTQQQQRKYQQQQRVKQSLSHHHQHHHHHHQQQLQLQQRHRRIRQPRRQVAPSVAQQQQQRLSKLKPKVYLPLDIAVPPLPPIPIPMPITTPVLPSAVAASTAAGETAAASLPLPLSTLPLPIDFSQCKNQNPNPSQKVSGGNMVLPLPLPPPPPPLPSSSVATMSSSSSGNVVAAAASTSAAAAATATTTTAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLTRDKVEFIQENNEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPMLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLHALRLKQPNFAHANAAGVVATTTSGITEPQSSQLSQLQLHDTSSPSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSGDNASTANSALDHSPGKRSLLGALGIGVGVGVGISHSSNDESRASSATTNLNLSLSTSNNNNNSLSNSTAATAAAVLGTPLTSTPSKPTPNSAGSSANRVGSGAGGGGGGGDSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETGSLAKKIRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASSTATNAALAAANRMTPKSLTITATPPLEATAAAVAGTNSAAASPAGMASGTAAAGGGQAGGKVPPAMVHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSTVYSSELELQQHKRSVHKSTTNSSNATSTKSATTTTAAATAAATIAGSSTAAAGAELAGETSLVLPLYWYQCKYCPSNFDTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECTLCRKMFFDRQMLNNHTPTCNRKPITATGAHQQDVQQQQQQQREHLQQPQRGIFKHKTGDDDDEDEDDDQLLLLDDAGTTTGAAAAPAVAGDGGNAASLAGIKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFSQVIALKVHRKWHFRGDSKQNPIIDGEATTLNSSSNSNNNNNNSMLHLRELHAVGLMPNQQQQQQKQQQQQQTSQQLLQQQQQQQQQRSKSLKRKRELKCEYCASTFISNNNLRRHMYELHKHEVNNLPEPPVIEVDAPLSCRRCGDLQFASKEAWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEETIVPVAVAAKHKLDTVTAAPAGAATAPEEPTATAATTATATATATAATTATTTTKAAATAAGAALKLKAKSETTTATEAGKAAAGQEEDSELEDDSDSDDDDDDEEGEEDSTSADDDDDEDVDDDEEDDEVEDDEDAAAVKRQQQRHHNNNNNNNKAGGNNNNNNNNNSALDEDDLIEEVIEEIDDAEEEEQQVERVGGKSKPTTTKRHNFEYNEAKLNGNSKQQTRHSSEEDEEVDDDDDEDDDDEDDDDLEMDEGQVDGGVSVAVGEGMTIDDIIEEDDGEDDDEEDDDDEEHAQHLVADHVVAEDDDDDDDDDDDDVVDDVDDDDDVDDVDDVDDVDDDDVDVDEDDDIDEDDFDDEQQPAAMRSNAALRRRVDDDDDDDDDDDDDDVVMDVDGDGDGDGGTSSSSESESTTTTSQSTGERRNKSKTVVSSSAASAAAADHSNNSSYTCDLCQLCFDSQEQLQTHIKSHFLNGPTTTAGGGNGGGGSSAASRGSQSSNIHQSSRSRSTTSSNSNSNSTNNNNNSNNNHNHKSKTKKETATTVASAAAASATAAAAAATAAATATATAAATAADADASLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00595382;
- 90% Identity
- -
- 80% Identity
- -