Basic Information

Insect: Drosophila repletoides
Gene Symbol: stc
Assembly: GCA_018150835.1
Location: JAECWQ010000221.1:4177049-4182015[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.7e+04 -4.3 1.6 15 19 544 548 543 548 0.81

2 14 0.02 1.8e+02 2.2 2.8 4 11 577 584 576 585 0.91

3 14 6.8e-07 0.0058 16.6 15.1 1 19 589 606 589 606 0.93

4 14 1.7 1.4e+04 -3.9 1.1 6 10 632 636 631 636 0.89

5 14 1.5e-06 0.013 15.5 16.7 1 18 642 659 642 660 0.95

6 14 2 1.7e+04 -4.1 1.5 7 13 664 670 664 671 0.75

7 14 2.3e-09 2e-05 24.4 12.9 1 19 700 718 700 718 0.98

8 14 2.8e-05 0.24 11.4 17.0 4 19 766 781 759 781 0.88

9 14 0.064 5.5e+02 0.7 11.5 1 11 821 831 821 843 0.79

10 14 3.2e-10 2.8e-06 27.2 15.1 1 18 848 865 848 866 0.97

11 14 2 1.7e+04 -4.6 1.2 6 10 895 899 895 899 0.88

12 14 2 1.7e+04 -7.7 8.8 14 18 918 922 903 923 0.76

13 14 1.1e-07 0.00098 19.0 14.4 1 16 959 974 959 984 0.94

14 14 2.5e-07 0.0021 18.0 15.0 1 19 991 1010 991 1010 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.7e+04	-4.3	1.6	15	19	544	548	543	548	0.81
2	14	0.02	1.8e+02	2.2	2.8	4	11	577	584	576	585	0.91
3	14	6.8e-07	0.0058	16.6	15.1	1	19	589	606	589	606	0.93
4	14	1.7	1.4e+04	-3.9	1.1	6	10	632	636	631	636	0.89
5	14	1.5e-06	0.013	15.5	16.7	1	18	642	659	642	660	0.95
6	14	2	1.7e+04	-4.1	1.5	7	13	664	670	664	671	0.75
7	14	2.3e-09	2e-05	24.4	12.9	1	19	700	718	700	718	0.98
8	14	2.8e-05	0.24	11.4	17.0	4	19	766	781	759	781	0.88
9	14	0.064	5.5e+02	0.7	11.5	1	11	821	831	821	843	0.79
10	14	3.2e-10	2.8e-06	27.2	15.1	1	18	848	865	848	866	0.97
11	14	2	1.7e+04	-4.6	1.2	6	10	895	899	895	899	0.88
12	14	2	1.7e+04	-7.7	8.8	14	18	918	922	903	923	0.76
13	14	1.1e-07	0.00098	19.0	14.4	1	16	959	974	959	984	0.94
14	14	2.5e-07	0.0021	18.0	15.0	1	19	991	1010	991	1010	0.96

Sequence Information

Coding Sequence: ATGTTCAAAAAAATAATTCGAGATTCCCCTCTGGGCAAAGAGGACAATGATGTTGCTATCAATGAGCTTATCAAGTATCCGCCCTATGGACCATTCTATGGCATTATGGGCGTGGTTTTTGCCATTGTATTCTCCTCTTTTGGCGCTGCCTACGGCACAGCAGTGTCTGGAACTGGTATAGCGGCCACAGCTGTTATGCGTCCCGAACTGATCATGAAGTCGATTATACCCATTGTCATGTCGGGCATCATTGCAATCTATGGACTGGTCGTCTCTGTGCTAATATCAGGCGTATTGGATTCTGCTGAAACTTATGCATTGGCCACTGGATATGTTCACTTTGCAGCCGGATTATCTGTGGGCATGTGTGGACTGGCATCCGGCTATGCCATTGGGATTGTGGGCGATATTGGAGTGCGTAATACAGCACTGCAGCCTCGACTCTTTATCGGCATGATTCTAGTACTGATATTCGCAGAGGTGTTGGGTCTTTATGGAATGATTGTGGCAATTTATCTATATACGAAGGACGTCATCCCCAGTGCCAACTCTGGCTCCGGGTCCAGCTCCAGCAACATACAGGTCTACAGCATTGGTGGCGGCGGCGGTGCCTTTGGCTTGACGCCGAACAGTAACAACGCTTCAGCTTCTAATAGTACTTCCAGCGGCAGCAACAGCACGAGCTTTGGCGGCTTGTATTCTCAGCCTGTCTTTGATTATCAAAATGGAGATGGAGGATCTGGTGGTGTTAACAATTATCAACCAGCAGAAGCTGCTTATCCTAATCTTTACTCGCCCTTTAGGAATAATCCATTTGCCGGTGCTAGTGGTCTGTTCGATTTCAGCAATTCCAAGCTGCAGGCTTCAGCGCCCGAATTTGTGCCTAGTTTTGCAAAGCTCAGCCTTAGTATGACCGGATCTGGTGCGGATTTGGCTTCGGCTCTGGAGCCTGTTGTTGCTGCGACGAGTCGAAGCAACAACCACAGCAAAAACAACAACAGCAACACTGCCATTCAGTCCAATAGTGAAACAGTTAACGGAGCATCCAATCATCATCATCAATATTACCAACAACAACAACAACAACAACAGCATCAACAACATAGAGGCGGAATGACACCCACCGAGGGACAGCGGCAACCAAAGCCGCACGGCAGTAACAGTCGCCAGCAGCGACGCAACGACTATCGGGAGGATCGGAATGAACGCAACGATGATCGATACGATCGAAAGAAGCCGCAGAAGCAACAACGCTACGACAATCATCGGAGTAACAAGCGTCGCGATGACTGGAATCGCAATCGAGATCGCATCAATGGTTATCCACGCGCCGCCGAGGAGCTGGACACCAGCAACAGCAACGACAGCGCACAGCCTTCCCCTGAGAAGCAACAGTATCATTACCAGCAGCAGCAAATCTCGCCGAGACGTGCGCCGGACAATGAGAAACTCTCGCAGCGCGAGAAACTAATGCGAGACATTGAGCAGCGACGCCTGGAGTGCTTGGTATGTGTGGAGCAGATCAAGGCTCATCATGGTACATGGTCATGCCAGAACTGTTACCATGTGCTGCATCTCAAGTGTACCATCACTTGGGCAAGTAGCTCAAAATCGGCCGAGGGCTGGCGCTGCCCGGCCTGCCAGAATGTGTTGCAGGAGCTGCCGCGTGAATATCTCTGCTTTTGCGGCAAGCTCAAGAATCCACCATTGACGCGCACCGAACTGGCGCACACCTGTGGGGAACCATGCTGTCGTGTGGAAGGCTGTAGTCATGCGTGTACCCTGCTCTGCCATCCGGGACCATGTCCTCCGTGCCAAGCTAACGTGACTCGAAGCTGCGGCTGTGGACGAACCAATAAGTTGATGCAGTGCGCCATGAAACAACAGTTGCAGTGTGAGTCCATTTGCGATAAGACGCTCAATTGCTGCGAGCATCGATGCCAACAGCTTTGTCATGCTGGCAAATGTGAACCATGCGCTGAACAGGTGCAGCAAAACTGCCACTGTGGCAAGCAGCAGCGAGAGGTGCTGTGCACTAGAGAAAGTCAGGACAAGCGCAACTACTCGTGCAAGGAATGTTGCGGCAAACCGCTGCCTTGTGGGAATCATAAATGCAAGGATTCGTGTCATGCCGGCGCCTGTCGCCCCTGCAAGCTGAGCCCTGCGCAAATAACCAGTTGCCCATGTGGCAAGCTGCCGGTGCCGGCGGAGCAGCGTAGCAGTTGCCTGGACCCGGTACCCACTTGTGAGGGTATCTGCAGCAAAACTTTACGCTGCGGTAAGCCGGCTCATCCGCATCAGTGCGCCAGCAAATGCCACTTAGGTCAGTGCCCGCCCTGTCCTAAGCAAACGGCTGTTAAGTGCCGCTGCGGTCACATGGATCAGATGATCAAGTGCCGCCAGCTATCGACACGAGCGGACGACGCTCGTTGCAAGCGACGTTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACGCAGAGTGCTGCATTGATATTGATCATGCCTGCCCGCTGCCCTGCAACCGTACATTGAGCTGCGGACGCCACAAGTGCGACCAGCCGTGCCATCGCGGCAACTGCCCGCCCTGCTATCGCAGCAGCTTTGAGGAACTCTATTGTGAGTGCGGCGCTGAGGTGATCTATCCACCTGTACCGTGCGGCACCAAGAAACCCGTCTGCAAGCGGCCCTGCTCCCGCACCCATGGCTGTGAGCATTTGCCGCAGCACAACTGCCATGCGCTGGCCACCTGCCCGCCCTGCATGATGTTCACCACTAAGTGGTGCCACGGCAGCCACGAGCAGCGCAAGACCATTCCCTGCTCCCAGGCCAGCTTTAGTTGCGGTCTGGCTTGCGGCAAGCCTCTAGCCTGTGGCCGCCACAAGTGCATTAAGCCCTGCCATGAGGGTGACTGCCAGCAAACCGGTGAGCTGTGCCGTCAAAGCTGCACTAAGCCACGTCTGCTTTGTGGCCACAAATGTGCGGCCCCATGCCACGAAGGCGATTGCCCTGAAACACCCTGCAAGGAGGTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAAAGCCGCAGCTGCCAGGAGCTTGCTAGAGAGCACAGTCGCATTGCCACCGCCCAGCTGGCTTCCTCAATGGCCGAAATGTCACGTGGAAATTATATGGAACTCAGCGAGATTCTGGCACCCACCAAAACTAATAAATCAAACAAAACTTTGGACTGCAATGATGAATGTCGTCTGTTGGAGCGTAATCGGCGATTGGCTATTGGTTTACAGTCGCGTAATCCGGATGCGCAGCTAAAGTCGCTTACCAAGTACTCGGAATTCTTACGTGGATTTGCTAAGCGAAATCCGGCTCTAACGAAGAGCGTTTATGAAACACTGACCGATTTGGTGAAGCTAGCTAAGGAGAGCAAGCAAAAATCGAGGAGTCACTCGTTCCCCACCATGAACCGGGAGAAGCGTCAATTGGTGCACGAACTGTGCGAAGTTTTTGGCGTAGAATCCATGTCCTACGACAAGGAGCCCAATCGCAATGTGGTGGCTACAGCCCACAAGGAGCGCTGCTGGTTGCCTGCCACTAGCATCATGGAAGTTCTGGCACGCGAATCTGGACAACGTCGCGTCCCCGTGCCCAGCAACAATGCATGGAACTTCAAAAAATAG
Protein Sequence: MFKKIIRDSPLGKEDNDVAINELIKYPPYGPFYGIMGVVFAIVFSSFGAAYGTAVSGTGIAATAVMRPELIMKSIIPIVMSGIIAIYGLVVSVLISGVLDSAETYALATGYVHFAAGLSVGMCGLASGYAIGIVGDIGVRNTALQPRLFIGMILVLIFAEVLGLYGMIVAIYLYTKDVIPSANSGSGSSSSNIQVYSIGGGGGAFGLTPNSNNASASNSTSSGSNSTSFGGLYSQPVFDYQNGDGGSGGVNNYQPAEAAYPNLYSPFRNNPFAGASGLFDFSNSKLQASAPEFVPSFAKLSLSMTGSGADLASALEPVVAATSRSNNHSKNNNSNTAIQSNSETVNGASNHHHQYYQQQQQQQQHQQHRGGMTPTEGQRQPKPHGSNSRQQRRNDYREDRNERNDDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQPSPEKQQYHYQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHTCGEPCCRVEGCSHACTLLCHPGPCPPCQANVTRSCGCGRTNKLMQCAMKQQLQCESICDKTLNCCEHRCQQLCHAGKCEPCAEQVQQNCHCGKQQREVLCTRESQDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPAQITSCPCGKLPVPAEQRSSCLDPVPTCEGICSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHLPQHNCHALATCPPCMMFTTKWCHGSHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKPCHEGDCQQTGELCRQSCTKPRLLCGHKCAAPCHEGDCPETPCKEVVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDAQLKSLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESMSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWNFKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: -
80% Identity: -