Basic Information

Insect: Drosophila repletoides
Gene Symbol: -
Assembly: GCA_018150835.1
Location: JAECWQ010000213.1:1085236-1088681[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.5e-05 0.0059 16.9 1.0 1 23 249 272 249 272 0.94

2 17 0.0019 0.13 12.7 2.3 2 23 280 301 279 301 0.96

3 17 0.066 4.5 7.9 0.5 2 23 333 354 332 354 0.95

4 17 0.0081 0.56 10.7 4.2 1 23 444 467 444 467 0.97

5 17 0.066 4.5 7.9 0.5 1 19 474 492 474 495 0.93

6 17 0.0041 0.28 11.7 4.3 1 23 504 526 504 526 0.95

7 17 5.3e-05 0.0037 17.6 1.2 1 23 533 556 533 556 0.97

8 17 9e-05 0.0062 16.9 1.1 2 23 564 585 563 585 0.96

9 17 0.0046 0.32 11.5 0.0 3 21 613 631 611 632 0.94

10 17 0.0074 0.51 10.8 2.0 1 23 683 706 683 706 0.96

11 17 0.024 1.6 9.3 0.5 1 23 743 766 743 766 0.94

12 17 0.00014 0.0094 16.3 1.6 2 23 805 827 804 827 0.95

13 17 0.00085 0.059 13.8 0.3 1 23 841 863 841 863 0.95

14 17 1.3e-05 0.00087 19.6 1.7 1 23 869 891 869 891 0.99

15 17 3.5e-07 2.4e-05 24.5 2.6 1 23 897 919 897 919 0.98

16 17 1.1e-05 0.00079 19.7 3.8 1 23 925 947 925 947 0.97

17 17 0.0021 0.15 12.5 0.2 1 23 953 977 953 977 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.5e-05	0.0059	16.9	1.0	1	23	249	272	249	272	0.94
2	17	0.0019	0.13	12.7	2.3	2	23	280	301	279	301	0.96
3	17	0.066	4.5	7.9	0.5	2	23	333	354	332	354	0.95
4	17	0.0081	0.56	10.7	4.2	1	23	444	467	444	467	0.97
5	17	0.066	4.5	7.9	0.5	1	19	474	492	474	495	0.93
6	17	0.0041	0.28	11.7	4.3	1	23	504	526	504	526	0.95
7	17	5.3e-05	0.0037	17.6	1.2	1	23	533	556	533	556	0.97
8	17	9e-05	0.0062	16.9	1.1	2	23	564	585	563	585	0.96
9	17	0.0046	0.32	11.5	0.0	3	21	613	631	611	632	0.94
10	17	0.0074	0.51	10.8	2.0	1	23	683	706	683	706	0.96
11	17	0.024	1.6	9.3	0.5	1	23	743	766	743	766	0.94
12	17	0.00014	0.0094	16.3	1.6	2	23	805	827	804	827	0.95
13	17	0.00085	0.059	13.8	0.3	1	23	841	863	841	863	0.95
14	17	1.3e-05	0.00087	19.6	1.7	1	23	869	891	869	891	0.99
15	17	3.5e-07	2.4e-05	24.5	2.6	1	23	897	919	897	919	0.98
16	17	1.1e-05	0.00079	19.7	3.8	1	23	925	947	925	947	0.97
17	17	0.0021	0.15	12.5	0.2	1	23	953	977	953	977	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCTGTGATTTGTCGCACTTGCGATGCAAGGGATACGGATAAACTCTACAAATTGGCAACTTCCACAAAACGGTTTCCGGATAAGTTGTTATCCGACATTTTAACCGAATTGACCAATATTGAGTTGGATGAATCCCTATCTCCACAACTGCCACAATGCCTCTGCGGCTCCTGCGCCCGCAAATTAATTGGCGCCTATTATTACATCAAACAGGCTCTGGTAGCCAATGAGCTCCTTATGATTCATGTGAAAGATGTAGACGCAGCAGGAGACAGACACGGGGACGCAGACATAGACGGCGATGAAGAGAGTGATAAGGGAGCAATCAGGACAGGCGCGGCAGCAGCGGTCACTGATTGTCTACAAGAGGCGCCCATGGAGCTCTGTGCTGAGCAGCATGTGGAGGTAAAATTAGAAACCGAGGAAGACGATCTAGAAAATGATATAACTTGCACTGAACTGCCGGAATTTAGTACAGTACAAAATGCCAACGATGTGGATAATGCTGTAGAAACTGAACCAAATAATAAGAAATCTACAGATCCGCTGACAACGCTAGAACCTGTCAAACAGGAGGAGGATGATCCGTCGAAAGCGACAACTGCGCAGGCACAGCAAGCATATAAAACTGATAATGATGACGAAGATTCTCTTGACGATTTACCCTTAAAGCAGCGCGTACAAAAATGGAAGCATGGAGGCATCGACAAGCTGCGTGGACTAAAAAAGCAAATATTCAAGTGCAAGGAATGTCCGAAGAGTTTTAAACGTCCAGAAATTTTAAGACAGCACGCTACGCGTTCCCATAAATCGAAAACGGAGTGGATATCCTGCTCCTTTTGTATACGTAAATTCAGTCATAGAGAGGCGTTACAGACACATATGAAGGTCCATAGGGATTCCAAGCGTTCGGCCAATTTGGGTGAAGGCAAAAAAGCCAAGGAGATTGATGGGAACGTATGTAAACCACATGGCTATAAGCTAATCGAATGCATGATCTGTCAGACTCAATATGATAAAATTGCGGACTTACGTCGGCATTTGGAGCACCATCCGGATATTGTTAGCTTTGGCGCCAGGTCGAATTTACAGCCACATGAACTGGCTGAACTATTCTATCCCGATGCCAAGGATGTTAGCGAGGACCAATTAAAAGCACTAATGCGTAAGGACTTGGACGCTGGCATATATTATCGTTTCTATTCCATAACAAATCAATCGGGTTACGAAATAAATTTGGATAGTTCTGAAACGGAAAGCGAAGCTGAACCGGATGGAGAGGATCAGTCAAAGCGGCAACGCAGCATACCTAAAGCCAAATATAGCTGTGAATTGTGCCAGGAGCGTTGTCAGCGGAAGTATCAGCTCTATGAGCATCAGCGTCAGTCGCATCCCTGGCTGGAGGCGCCTCACGTCTGCGGGAGGTGCGACGCACGTTTTGTCAGCCTACAGCTGCTGCGACATCACAATGAATCCCAATGCAAAAATGCCCAAAAACGTTTCCTGTGCCACAAATGCCCTCTACGCTTCCGCTGGCGGCATAATCTAAAGGTTCACATACGTGAGCATAGAATTCTGAATCAAACATTTGAGTGTACGACCTGCAAGCGGGTTTTTGATAAAAAGAAGTCCCTGACGGTGCATTTGCTTAGCGTGCACGCAGAGGAATCGAAGCTGATACCGTGCCAGTGGTGCTCACGCAAGTTCTATCGACGGGATTATCTAGTGAAGCATCTAAAGCGTCATGGCATACGGGAGCAGGATATACCCCTAGCTGAGACGTTAATTTCGGCCACATCAAAGCCGAACGGTGCCAAAAGAATTGCCTGCAAAATCTGTAATATGCAATTTGCAAGAATCGTCGATTTGCGTGCCCACATTCAGCTGGAACTGAAGCTGGCGCTTTCGCTGCACCAGAGCTATGATTCTCTAAATAATTACTCCATCACCAATGAGTCGGGCTACGAGTTGCAGCTGTGCGATTCCGAAACAGAGGATGAAATGATCATGCAATCCTCGCCCGGCTCACGCCTTCCCTATATCTGTGAACTGTGCAAAGTGCAATGCAAACGCAAATACGAAATGATTCAGCATCAACGGGCGATGCATCGCTTCGACAAGATGCCACACGAGTGCGAACGTTGCATCTTCAAATGTGTCTGCAAGAGCATCATGGATCAGCATCGGCAATGGCAGTGCCATAGTGCTGAAAAGAAGCATGTGTGCAGCCGATGCGGCTATAAATTCATGTGGCCAGAGAATCTGCAGGAGCATGTACAGCTACAGCATGGCGGGATCGAAAGTCCATTGGCAGTGGCCTCAGAATCCACTAGCGGAGATCGTACGCCCAGTGATGCCGCCGAAGCTGGAACTTCAACTAGTGGAGATGGGGTGCCGCTGCTGCAATGTCCGCACTGTGATCGCACCTACCAAATGAAATCGCGTCTGAACAATCATATACGGGATGTGCATATCAATGGGGATCGAAAACGAAAAGAGGCTATACAGAAGTTCCTGTGCTCGCTGTGTGGCCGAGAAACTCAGTCGGCGGCCACTTTGGTCACACACATGAGACGCCACACGGGCGAGAAGCCATTCAAGTGCGATCTATGTGAAATGGCTTTTCCCAGGCACTCGGAACTCACATCGCATCGCCGGATGCATACGGGAGAGAAACCATTCCATTGCACAGTTTGTGGCAAAGATTTTGCTCGCTCCGACAAACTGAAGCGTCACATGCTCACGCACAGTGGTTTGAAGCCGCACAAATGCACCTACTGCGATAAGAGCTATCGCCAGGCCAAGGATCTAAAATTACATTTGCAACAGCATACCGGAGAGTGTCCTTTTATCTGTGGCACATGCGGCGAACGTTTTATACAGGGCACAGCGCTTGAGAAGCACCGCATGATGCGTCGTCATTTCGATGAGGTGGAGGAACGTACGAGTACTACAACGATTACAACACTAGCCACTTAG
Protein Sequence: MKLPVICRTCDARDTDKLYKLATSTKRFPDKLLSDILTELTNIELDESLSPQLPQCLCGSCARKLIGAYYYIKQALVANELLMIHVKDVDAAGDRHGDADIDGDEESDKGAIRTGAAAAVTDCLQEAPMELCAEQHVEVKLETEEDDLENDITCTELPEFSTVQNANDVDNAVETEPNNKKSTDPLTTLEPVKQEEDDPSKATTAQAQQAYKTDNDDEDSLDDLPLKQRVQKWKHGGIDKLRGLKKQIFKCKECPKSFKRPEILRQHATRSHKSKTEWISCSFCIRKFSHREALQTHMKVHRDSKRSANLGEGKKAKEIDGNVCKPHGYKLIECMICQTQYDKIADLRRHLEHHPDIVSFGARSNLQPHELAELFYPDAKDVSEDQLKALMRKDLDAGIYYRFYSITNQSGYEINLDSSETESEAEPDGEDQSKRQRSIPKAKYSCELCQERCQRKYQLYEHQRQSHPWLEAPHVCGRCDARFVSLQLLRHHNESQCKNAQKRFLCHKCPLRFRWRHNLKVHIREHRILNQTFECTTCKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRRDYLVKHLKRHGIREQDIPLAETLISATSKPNGAKRIACKICNMQFARIVDLRAHIQLELKLALSLHQSYDSLNNYSITNESGYELQLCDSETEDEMIMQSSPGSRLPYICELCKVQCKRKYEMIQHQRAMHRFDKMPHECERCIFKCVCKSIMDQHRQWQCHSAEKKHVCSRCGYKFMWPENLQEHVQLQHGGIESPLAVASESTSGDRTPSDAAEAGTSTSGDGVPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIQKFLCSLCGRETQSAATLVTHMRRHTGEKPFKCDLCEMAFPRHSELTSHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCDKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQGTALEKHRMMRRHFDEVEERTSTTTITTLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519319;
90% Identity: -
80% Identity: -