Drep006230.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila repleta
Gene Symbol
lov
Assembly
GCA_018903745.1
Location
JAEIGN010000497.1:22230178-22246844[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9e-19 1.7e-15 56.2 0.0 1 44 887 930 887 931 0.96

Sequence Information

Coding Sequence
ATGTTAAAGGACGCCGAGGAGCTGATAAAACGCTGCAAACTGACGTCGCTGCCGCTGGCGCTGCATATGAACGAGTACGGCCGCCAGGTGGCGCCAGCGCCTCTGACCGCGCTGCCGCTGCTGGCCAAGCCAACCAACCCGACGCCAGTGGGAGCGGGAATGGGTGTGACAGCGGGTGCGGGAGCGAGCGCAGTCTCTGACCATCATCATCTACACACGAATCATCAGCTGCCACTTCCGCTGCCGTTGCCTCTGTCGCTGCCCATGCCGGCGACATCGACGCACAGCCACAGCCACGCCCACGCCTCGATGCACACGACGCCACCCACGACGCCGCCCACGCCACCAGCTTTGCCGCTGAACATGAGCCAAACGGCAAGTGCAGCAGCAGCGACAGCCGCAGCTGCCACGCCCACAACAACGCACAGTCCACCTGCCACGCCCACAGCGGTGAGTGCCGCCTTGGCGGGCACACAGGATCACTACAGCCTGCGCTGGAACAACCATCAGAATCACATCCTGCGCGCCTTCGACGCTCTCCTGCAGACCAAGACCCTGGTGGATGTGACCCTCGTCTGCGCGGAGACCTCGATAAGGGCCCACAAAATGGTCTTGTCCGCCTGCTCGCCCTTCTTCCAGCGCGTCTTTGCGGAGACGCCCTGCAAGCACCCTGTCATAGTGCTGAAGGACTTCCGAGGCTGGGTCGTGCAGGCCATAGTGGACTTCATGTACCGAGGAGAGATCAGTGTGCCCCAGCAGCGCTTGCAGACGCTCATACAGGCGGGCGAGTCGCTGCAGGTGCGCGGCTTGGTCGAGAGCTCCGTGCCGGAGCACACGCCCACGCCGGCCGCCTCGCCGGACGACTTCAATCTGTTGGACACCTCGCTGCTCTCATCCAGCTTCGAGGATGAGTCGCCTTCAATGGTGAGGCCAGCGAGTGGCAAGCTGATCATGCCCGGGCGGCTCTTTGGCAGTCCGGCCAGCACTATGGCGGCGCTTAGCTTACGGCGCAAGCGGGAGCAGGAGTGCGAGCGAGAGCCGGAGAGCGACCAAGAGCTGGGCGGCAGTTCGCCAATGCCGCGTCGCAAGCAGGCGCGCCCCCGTCGTCGTTCCGGCGATGTGCCACACGACTTTGCGCTCAACAAGCCGGAGACGTCGGAGTCAGCGCTGCAAACTGTGATCAAGCACGAACTGCGGGAGGAGCAGGACCAGGACCTAGAGCGGGAACAAAACGAGAAGCGTTCCGCAACGGATGACGTGAGTCCCATGGAGCAGGATGAGCAGCAGGGAAATAATTCAGCTGCTGATCCTGAGCACCAACAGCAGCAGCAGCAGCAGAGGGAGAATCTTGAGCCAGAGCAGGAGCGAGCCATGCCACTCGTCATGTCCAATCAGCAGGTCGAGCCGGAGCTAGACGAAGAAGAGGACGAAGATCAAGAACAGGAACAGGAACAGGATGTGGCTGAGAACGAGCATGATCATGATCACGATCACGATCATGATCACGATCGAGTGCACGATCACGACCATGATCAGGATCCGGATGAGGATGAGGACGAACAGGACATCGAAGAGCTTATACACACGACCAACGAACTGCGCAGGCAAGCGGCGGTGGCCGCTGCCAATGCAGCAGCAATGTCTCCTTGCCCCAGCGACGGGCCCGAGGATCTGTGCACCACCAAGAAGGACAAGGACACCAGCAACTGCCACTCCTCCGACAATGAAGGGAACGCCAACAACAACAACAACAGCAGCAAGCTGCAGGACAACAATCAACGCATTATGTTATCCTTAAAGGATATAAGGCAGCTCAATGCCAAGCCCAGCGCCAGCTCCACCCCCAGCCACACGCCCAACAGCTGTACGCCCAGCAACAATGGTCTCCTGCCCTTTCCGCCCCCAGGCATGCGGCCACCCGGGCTGCCCGACAGCCCGCCCTGCCACATGGAGGCCCTGGAAGCACAAATGCATGCGGCAGCTGCCGCCGCCGTCGCTGCTGCAGGCGCAGCTGGTGAGAATCCCTTCCATCACATGGAGCATCAAATGGAAATGTCGCTGGCCGCGGCGGCCGCAGCGGCAGCCATGCATCAGCGCGAGTCGCGTGATCCGCGAGAGACCCGCGAGCAGGCGCTCCAGCGCGAACACAATGCATTCGCCAGCAATCTGCTGGGACCGATGGGTCTGCCGCCCTTTGGTTCGCACAATGGGGTCACGGGAGCGGGCTGCGGAGGTCAAGCGCCGCACGAGCGGCTCGAGGAGAGTATGAATCGGCTGAGCAAGGAATTCGGGAAGGAGTTCGGCAAGGAGTTTGGCAAAGACTTCGGCAAGGACTTTTGCAAGGACTTCGCACCCACCTCGCCGATGAGCCTGCCCGGCCACTACAATCCGCAGGATGGACAGCCGCATCCGCCGTCGCCGCTGCCCTTTCCCGGCATGTCCTCGGCGTTGACGCTAACGCCGCCGCACATGTTCGGCCTGGACTCACCGCTTGGTCTGTTTCCGCCCGGCATCGATCCTGGCAAGCTCTACAACCCGCTGATGGAGATGAGTGATCCACGCGATATGCCCGGCGGACCGCCGCCGTTCCTCAAAAAGAAAATGCCACGCCCCAAAGGACAGCACTCGGCGCCACGCGGCGGCCCGCCACGCTCATGGACCAACACCGAGCTGACGGAGGCACTGCAGCACGTGTGGAACAAGAAGATGACCACGTCGCAGGCGTCGCGCATCTTCGGCATCCCCTACAACTCGCTGCTGATGTATGTGCGGGGCAAGTACGGCAAGAGCTTGAAGCTGGAGCAGCTGCGCAAGGACTGCATCAGCGGGCCGCCCATTGAGATGCTCCAGATGGGCATCAGCGGCGGCGGAGGCGGCGGCTCCAAGAGCGAGAAGAAGGAGCGCAAGGACAAGGACAAGGATAAGAACGCCCACGGTAACTCCAACAGCAACAACAACAACGCCAACGGCGGCGGCAACGGCAGTGGATCGGCTGGTGGTCCACCGCCCATGCCACACCCCAGCGAGCTGGGTGGCCTGGGCCCGCTCGACTTGGAGCTGGGCCTGCCGCTGGGACCACCCGCCGGTCCGCGCAGCGGCAGCTCAGAGCCGGACCTTCTGGGCGGTCCCAACGCCCTGTTCAATCCGTTCAATCCGCAAGGCTTCTACCCAGACTTCGCCGGGGGCTTCCCCGGCCTGCCGCTCAGCATGCTCAATCTGCTGCCGCCCGCGGAGCGGCATCACGCGGCGGTGGCCATGCACAATCTGGGCGTCAGCATGGACGAGGACTGCAAGTCGGTGGGCTCCAAGCAGTCCTCCTCGCTGGACGACGACTTCGCCATGGCTGCGGCCGCCGCTGCCATGGAGCAGCGCCGACATGGCGAGGCGACGCTGGCGCAGGCGAACGGGGCGGCGCAGGATTGA
Protein Sequence
MLKDAEELIKRCKLTSLPLALHMNEYGRQVAPAPLTALPLLAKPTNPTPVGAGMGVTAGAGASAVSDHHHLHTNHQLPLPLPLPLSLPMPATSTHSHSHAHASMHTTPPTTPPTPPALPLNMSQTASAAAATAAAATPTTTHSPPATPTAVSAALAGTQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDTSLLSSSFEDESPSMVRPASGKLIMPGRLFGSPASTMAALSLRRKREQECEREPESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKPETSESALQTVIKHELREEQDQDLEREQNEKRSATDDVSPMEQDEQQGNNSAADPEHQQQQQQQRENLEPEQERAMPLVMSNQQVEPELDEEEDEDQEQEQEQDVAENEHDHDHDHDHDHDRVHDHDHDQDPDEDEDEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKDTSNCHSSDNEGNANNNNNSSKLQDNNQRIMLSLKDIRQLNAKPSASSTPSHTPNSCTPSNNGLLPFPPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGAAGENPFHHMEHQMEMSLAAAAAAAAMHQRESRDPRETREQALQREHNAFASNLLGPMGLPPFGSHNGVTGAGCGGQAPHERLEESMNRLSKEFGKEFGKEFGKDFGKDFCKDFAPTSPMSLPGHYNPQDGQPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGGSKSEKKERKDKDKDKNAHGNSNSNNNNANGGGNGSGSAGGPPPMPHPSELGGLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHNLGVSMDEDCKSVGSKQSSSLDDDFAMAAAAAAMEQRRHGEATLAQANGAAQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00534666;
90% Identity
iTF_00520006;
80% Identity
iTF_00586764;