Basic Information

Gene Symbol
Arid2
Assembly
GCA_018903745.1
Location
JAEIGN010000497.1:24221793-24227364[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.6e-25 2.1e-21 75.9 0.0 2 89 83 169 82 169 0.93
2 2 1.2 2.7e+03 -1.4 0.0 26 74 1537 1587 1524 1593 0.74

Sequence Information

Coding Sequence
ATGACGTCCATTGATAGTGTACGCGTGCTGCTCCAGTCTCTGCCAGCAGCTTCGCCTGCTGCTGCCAACAACAACACACAGCAAAATGAGTCGACGCCGGCAAAACTTGGCGCTGCGGGAACACCACTGCGCGCGAGAAATACGCAGCAACAACAGCTACAAGCGCAACAGCAATTAGTTTTTGGAACGCCAGAAAAGCCACAATCTGGAGACGCACCTGGAACTGAGGACCAGCAGCTGAGTGCTCCGGACGAGTTCTGGCGTGATTTGCATCAGTTTCATGAGCGGCGCGGCACCCCACTGACGCAGGCGGCCAAGATTAGTGGCCAGCATGTGGATTTGTATCGACTGTATCAGGAGGTCACGGAGCGCGGTGGCTTCAATAAGGTCAACATGCGTGACGAGTGGGACGAGGTGTACAGCGCGCTGGACACGCTGCGGGACCGTTGCGTTAATGGCACCGCTGGCATAAAGCATATCTATCGTCGCTATCTGGATAAGTACGAGCGCTTAAACTTTTTGGGCGAGGACCCAGACAAGCTGGAAGCCTTGGAGGCGGCCATCGAGTGCGTCGATCTCGGCGCCAGCGCCAGTCGTGTGCGCTCTCGTGCCTTGGCTGGCGGCGCCATAGGAGGTGCAGGTGGCAGCTTGACGGGCAGCGGCCTGGGAAGCATTTTTGGCATGGCACACTCCACGCTGACGGCCGTGCCCATGGCCTATAACCACCGTCAGCACATGGTAAATGCGGATCGCCGTCGCCAGTACAAAATGTCTACGCAACTGCACAAGCACAGCAGCTACGACAAGTTGCTGCTGTCTCTTATATCGCCGCTGCCTAACGAGCAGGACTTTGCCATCAATGTGTGCACTCTGATGGCCAACGAGCCGCGTTCCACTCTGCAGCTGACCGAGTGCCCCAAGCTCCTGGACGTCTTGCTCGCCCACTTGGGGGTCTATGCGGACTACAGCATGCGTCAGCTATTCCAGCAAGGCCACAACAACACAGGCATGCTGGTGCGCAGGCATTCTAAGCTTAATTTTTGGCGGGATTTGCTGTACGATAAGCCCCAGATTCTGGACTTGTATACGGACGAACAAGCCTGGCTGGACAATGGTCTGATTAGCAAGGAGAGTGATGCCTACGATGACTACCTGTTCCAATCCGACGAGCTCGATTTCGAGATGGACTTCTTGAACCTGCGCCGCAGTCATGGCACGGACGAACGCATTGGCCAGCGTATTCTCCAGATTGTGCAGCTATTGAGAAGTTTGAGCTTCCACCAGGAGAACGTCGCGCTCCTTGCCACAAACCGCACGCTGTGGCGATATCTGGTCATGGGCGCCAACGTGCGTTGGAGCAACATCCACATTCAGGCTTTGGAGACAGCTGGGAATCTGGCTCATCAGTTCGAGCTGTTTGACCCTGCCACGGACGAGCTGTCGCGGAATTTGCTGGCTACGCTGTGCGAGGGCATCGAATCGAATGACCGGGCCGTGATCATCAGCTGCCTGGAGATACTCTACAAGCTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGCTGTCTCGGCTTGGACTTCTATCAGCGAGTTATGCTGCTGTTGTCGCTGACAGACGTGATGCTACTCATCTTCACCCTGGAGGCGATCTACGCGCTGAGCACGTTAGGTGCACGACCATGCTCCATGTTGGCGCAGGTGCGCGGTCTGCTAGACCAGCTGGTAGCTTTGCTGACTGTGGAGGCGCAATCATACGGCGCTGCGGGCTGCATATTGATGCGAGTGGTTGAGGTGGTGCCAGGCAACGTATTGTCTACACTGTCACAGTCTTTGCCTAGCAATCAGATGACCCCATTGATGGCGGTTAAGCAGCCGCAGCCACAGCCGCAGTCGCAGCCGACAGCGCCAATTGTGTCATTGCCTCTGCCAGCACCAACGCAGGTGCAAGTGCTGCCGCCACAGCCGGAGAGCGTGTCGCTACCAGTGGCAGCTCCTTCTGCTGCTGCTCCTGTAACTGCTCCCGTTGCCATACCTGCACCTATGCCCCTGCCCCTGCCTCTGCCAGTGCCTAGCTTGCCGCACGTGCAGCTGCCAGTGGCCAGTTTGCCACAGGTGCAGCTTCCGCCGCCGTCCACCATGCAAGTGCCAGCGCCAGCGTCAGTAGCAGTAGCAACCACTACGGTTGCGCTGCCTGCGGCGCCATCAGCTCCACAAAGTTTCACCCACGACGACGAGACGTATGCGTTGGCCTGGCTGGGGGCCACTTATGAGCGACCCGGCAACGGCCACGAGTACCGCGTGGAGCAACAGGAGCTGTACACCATTTACCTATCGCATTGCCAGAAGGCGGGCAAGCATTCGGTGGTCAATCGTCTGCAGTTTCCGCGCCTCGTGCGCCTCATCTTCAACGCGACCGAACCAACGTTGACACCAAAGTCGGACTCAACAATTGGCGAAGCGGTCGAGGAAGTGAGTGCTACGCCCACTCCGAGTTCGTCGCTTATAAAGAGCTTGCTGGCAAACAAGGTTAACGAGCGACAGCTGAAGCAAAAGGCGCAGGCTCAACCGCCCGCTCTTGTGGCCACCACAGCTTCGTCAACTGGCTCGTCCGCCGGACAACCCATCAAGGTAACCTCCACGGCAATTAGCGCCTTCGTGAACAATCCGTTGATGCAGCATACGCCCGTGAAGGTGGGCCAAACCACCATAAAGCCGCTGCATCCGCAGCTGCCAATGGAGAAGAAGCCAATGACAGACTCGGCTCCACCGCCGCTCGCCCCACTCAGTGGGTCCAATGTGTTGACAAAGGACGCGCAAGGACGCACCGTAATTATACAATCCAAGCGGAAGCTCACCATCGACGACGAGCAAAATAAACGGTTGGCGCTGGAGAGCAGTAATGCATCCACTGGCAAGGACGAGCCGCAGGTGACGCCCTCCAAGAATGCTGCCAATCTCTATGCGGACTTGGCTGCCTCCATACTAGAGGATGAGGACTTGGATGACGTACCGCCGTTGGCAGCCTCCAGTCAAGAGCAGCAACCCACGCCTCAGCAACAACAACAGCAGCAGCAACAATTGCAGCTAATCTCAGCTAAGGTGCACTCCACACAGCGGCAACTCATCTTTCCCACGGGCAACTCGCCGGCGCCGCCACCGCAGTTGAAATTGGCGACAACGGCAACCATCAAGACGGATCAGGGGCTGCAGACGGTGCCGGTCATACTGCAGCAGAAGACGGATCAGCAGCAGCAGCAGCCGACGCAAACGCAGTACGTGCTGGCCACCAACCAGCAGGGGCAGACCTATTTGGTGGCACAACAGTCGGCCCCAGTGGCAGCATCGACCAATGCGCCCGGCACGCCCACTCTGTTGGTCACACAAGCACCGCAGCAACAGACGAAGACGATCATCATACTTCAGCAGCCGCCCGGGGTGAGTTGCACCAATGCGCCTGGCACACAGAAGGTTATAATGACGACAGCGCAGGGGCAGCAGGTACTGGTGACCACTACTACGGCGCCTGCTGCAGCAGTGCGTCCTGCCACCCAGGTCCAGCAGCAGCAGCAGCAAATTTTTATAAACCCGCAACGTGCAGTCTCCGCTGCATTGGGCGCGGGTCAAATGTCGCCTTCGCTGCTGTCACAGCTTAACCAGATACCTGCAACCATAAAGCTGCATCAGCCGCAGCCGGCGCAAGCCGCGCAGCTGCATCGGGGCGGCATCGTTGCCAGCAAAACAGCGCCCATACCTCAGCTGCAGCAGCATCAGTCCATTATTCAGCAGCACATAATCTCGAGTCCAGCAGCTGGCGCAGACAAGCGGCAGCTGCTGCTGGGCGGCATCAAGGAGACGACGCTCATCACCCAAACGCCCGTAACGGCTGCCCCCTTGCAGCAGAGTCAGCTGAATTCGCAGACAATCATAACCACCCAGCCACCGGTGGGCGGCACGTCTGTCGTGGGCGCTGCACTTCAGCAGCAGCAGCAGCACATACGCAGCGTGCTGGAGCAGCAGCAACAGCACCATCCCTCCATCATACAGCAGAAGATTACAATGCCCATAGCGCTCGCGGAAGCGGCCAAAGCGAAGCCTGCGCCAGCAATACCCATTGCTAAGAAGCCGATGCCGTCACCCACATCGTCTGCCTCTCCTGCGCAACAGCATCCGGTGCAAATGCCTGTACTGAAGCCCACTCAACAAGGGCAGGCGGCCAGCGGCGAGTCGAAGCTGACAATGGTAGTGGAATCAAAACCAGTGGAGCCACAGGCTGCCACAACAGTAACAGTTGCTAGTAACCCATCCACTGGGGCAACAGCAGTTGCTACTGCAACAACAGCGGCAACGAGTGTTGCAAGCAATGCCAATCCCTCAGCTGCTCCGGCTGTGAGCGCTGTGCCCGTGGATGTGAATTGGTTGTTCATTTGTGATTGGCGCAATTGTCCTCGCCGCAAGTTCAAATCGCTCAACGAGCTGCAGCACCACGTCTGCAATGTGCACTGTCCGGATCATTTGGACTCGGGCGCGGAGATCTACTGCCAGTGGGGCAGCGGTCCAAGCCTGTGCGACAACATTGCTCGCAAGCGCTACTCGTTGATGACGCATCTCGTCGATCGTCATCTCGCGCTGGATGATTTGCGAGCCAGCGTGCAGCGACGCCTTGCCACTGGCATACACAATGTGTCCCCCGCACAACCAACGGTCACAATAGTGCGCAATGTAGGCAGTGCCAATGCCTCGGCAACGGCGTCAGCAGCTGCTCAAGCGGCCACTACTGCTGTGGGAACTTCCGCTCTGCAGGCAATTAAACGGCACTCTGCTGACTTTCTGAATTCGAAGGAGCTGATGGATGAGAACGAGGGGCCAGTCACAAAGAGCATTCGGCTCACGGCTGCGCTGATATTGCGGAATCTGGTCAACTACTCAGTGACGGCCAAGCGCAGCTTGAAGCGGTATGAGCCGCATCTGGCTAATGTGGCCTTCAGCAATGTGGAGGCCAGTGGTGTACTCTCACACATACTACACGAGCTGAGCCAGTAA
Protein Sequence
MTSIDSVRVLLQSLPAASPAAANNNTQQNESTPAKLGAAGTPLRARNTQQQQLQAQQQLVFGTPEKPQSGDAPGTEDQQLSAPDEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVDLGASASRVRSRALAGGAIGGAGGSLTGSGLGSIFGMAHSTLTAVPMAYNHRQHMVNADRRRQYKMSTQLHKHSSYDKLLLSLISPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQQGHNNTGMLVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLISKESDAYDDYLFQSDELDFEMDFLNLRRSHGTDERIGQRILQIVQLLRSLSFHQENVALLATNRTLWRYLVMGANVRWSNIHIQALETAGNLAHQFELFDPATDELSRNLLATLCEGIESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSTLGARPCSMLAQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNVLSTLSQSLPSNQMTPLMAVKQPQPQPQSQPTAPIVSLPLPAPTQVQVLPPQPESVSLPVAAPSAAAPVTAPVAIPAPMPLPLPLPVPSLPHVQLPVASLPQVQLPPPSTMQVPAPASVAVATTTVALPAAPSAPQSFTHDDETYALAWLGATYERPGNGHEYRVEQQELYTIYLSHCQKAGKHSVVNRLQFPRLVRLIFNATEPTLTPKSDSTIGEAVEEVSATPTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTASSTGSSAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPMEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDDEQNKRLALESSNASTGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQEQQPTPQQQQQQQQQLQLISAKVHSTQRQLIFPTGNSPAPPPQLKLATTATIKTDQGLQTVPVILQQKTDQQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAASTNAPGTPTLLVTQAPQQQTKTIIILQQPPGVSCTNAPGTQKVIMTTAQGQQVLVTTTTAPAAAVRPATQVQQQQQQIFINPQRAVSAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQAAQLHRGGIVASKTAPIPQLQQHQSIIQQHIISSPAAGADKRQLLLGGIKETTLITQTPVTAAPLQQSQLNSQTIITTQPPVGGTSVVGAALQQQQQHIRSVLEQQQQHHPSIIQQKITMPIALAEAAKAKPAPAIPIAKKPMPSPTSSASPAQQHPVQMPVLKPTQQGQAASGESKLTMVVESKPVEPQAATTVTVASNPSTGATAVATATTAATSVASNANPSAAPAVSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVSPAQPTVTIVRNVGSANASATASAAAQAATTAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSVTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00568038;
80% Identity
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