Basic Information

Gene Symbol
Arid2
Assembly
GCA_035047545.1
Location
JAWNPL010000026.1:1403456-1408883[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8e-25 1.8e-21 76.4 0.0 2 89 84 170 83 170 0.93
2 2 5.9 1.2e+04 -3.2 0.0 27 64 1608 1647 1597 1660 0.73

Sequence Information

Coding Sequence
ATGACGTCCATTGATAGTGTACGCGTGCTGCTCCAGTCTCTGCCAGCAgcttcgcctgctgctgccaacaacaacaacacacagcaAAATGAGTCGACGCCGGCAAAACTTGGCGCTGCGGGAACACCATTGCGCGCGAGAAAtacgcagcaacaacagctacaagcGCAACAGCAATTAGTTTTTGGAACGCCAGAAAAGCCACAATCTGGTGACGCACCTGGAACTGAGGACCAGCAGCTGAGTGCTCCGGACGAGTTCTGGCGTGACTTGCATCAGTTTCATGAGCGGCGCGGCACCCCACTGACGCAGGCGGCCAAGATTAGTGGCCAGCATGTGGATTTGTATCGGCTGTATCAGGAGGTCACGGAGCGCGGTGGCTTCAATAAGGTCAACATGCGCGACGAGTGGGAGGAGGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTTAACGGCACCGCTGGTATAAAGCATATCTATCGTCGCTATCTGGATAAGTACGAGCGCTTAAACTTTTTGGGCGAGGATCCAGACAAGCTGGAAGCCTTGGAGGCGGCCATCGAATGCGTCGATCTCGGCGCCAGCGCCAGTCGTGTGCGCTCTCGTGCCTTGGCTGGCGGCGCCATTGGTGGTGCAGGTGGCAGCTTGACGGGCAGCGGCTTGGGAAGCATTTTTGGCATGGCACACTCCACGCTGACGGCCGTGCCCATGGCCTATAACCAGCGTCAGCACATCGTAAATGCGGATCGCCGTCGCCAGTACAAAATGTCTACGCAACTGCACAAGCACAGCAACTACGACAAGTTGCTGCTGTCTCTTATATCGCCGCTGCCTAACGAGCAGGACTTTGCCATCAATGTGTGCACTCTGATGGCCAACGAGCCGCGTTCCACTCTGCAGCTCACTGAGTGCCCCAAGCTCCTGGACGTCCTGCTCGCCCACTTGGGGGTCTATGCGGACTACAGCATGCGTCAGCTATTCCAGCATGGTCACAACAACACAGGCATGCTGGTGCGCAGGCATTCTAAGCTTAATTTTTGGCGGGATTTGTTGTACGATAAGCCCCAGATTCTGGACTTGTATACGGATGAACAAGCCTGGCTGGACAATGGTCTGATTAGCAAGGAGAGTGATGCCTACGATGACTACCTATTCCAATCCGACGAGCTCGATTTCGAGATGGACTTCTTGAACCTGCGCCGCAGTCATGGCACGGACGAACGCATTGGCCAGCGTGTTCTCCAGATTGTGCAGCTATTGAGAAGCTTGAGCTTCCACCAGGAGAACGTCGCGCTCCTTGCCACAAACCGCACGCTGTGGCGATATCTGGTCATGGGCGCCAACGTGCGTTGGAGCAACATCCACATTCAGGCTTTGGAGACAGCTGGGAATCTGGCTCATCAGTTCGAGCTGCTTGACCCTGCCACGGACGAGCTGTCGAGGAATTTGCTGGCTACGCTGTGCGAGGGCGTCGAATCAAATGACCGGGCCGTGATAATCAGCTGCCTGGAGATACTCTACAAGCTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGCTGCCTCGGCTTGGACTTCTATCAGCGagttatgctgctgctgtcgctgacAGACGTGATGCTGCTCATCTTCACTCTGGAGGCTATCTACGCGCTGAGCACGTTAGGTGCACGCCCATGCTCCATGTTGGCGCAGGTGCGCGGTCTGCTAGACCAGCTGGTAGCTTTGCTGACTGTGGAGGCGCAATCATATGGCGCTGCGGGCTGCATATTGATGCGAGTGGTTGAGGTGGTGCCAGGCAACGTACTGTCTACACTGACACAGTCCTTGCCTAGCAATCAGATGACGCCATTGATGGCGGttaagcagccgcagcagcagccgcagtcgcagccgtcAGCGCCAATTGTGTCGTTGCCTCTGCCAGCACCAACGCAGGTGCAAGTGCTGCCGCCACAGCCGGAGAGCGTGTCGCTTCCAGTGGCagctcctgctgttgctgctcctgtaACTGCTTCCGTTGCCATACCTGCGCCTAtacccctgcccctgcccctgcctctgccagTGCCTAGCTTGCCGCACGTGCAGCTGCCAGTGGCTAGTCTGCCGCAGGTGCAGCTTCCGCCGCCGTCCACCATGCAAGTACCAGCGCCACCTGCGCCAGCGTCAGTAGCATTAGCAACCACTACGGTTGCGCTGCCTGCGGCGCCATCAGCTCCGCAAAGTTTCACACACGACGACGAGACGTATGCGTTGGCCTGGCTGGGGGCCACTTATGAGCGACCTGGCAACGGGCACGAGTACCGcgtggagcagcaggagctgtaCACCATTTACCTATCGCATTGCCAGAAGGCGGGCAAGCATTCGGTGGTTAACCGTCTCCAGTTTCCACGCCTCGTGCGCCTCATCTTCAACGCGACCGTAGGACCCGCTATTGTCCGGCAGATGGATGGAACAGAACTTCCCGGAACACACTACGTGGGCATAAGGATGCGCGCACAACCCTTGCccgtgcaacagcaacaacagcagcagccgccgcaacAACAGAAAGTAACGACAATAGCTGCCGCAATAGTTGCTAAGAAGGAACCAACCTTGACACCAAAGTCGGACTCAGCAATTGGCGAAGCGGTCGAGGAAgtgagtgccacgcccaccaacaCGCCCACGCCGAGTTCGTCGCTTATAAAGAGCTTGCTGGCAAACAAAGTTAACGAGCGACAGCTGAAGCAAAAGGCGCAGGCTCAACCGCCCGCTCTTGTGGCCACCACAGCATCGTCAACTGGCTCGTCCGCCGGACAACCCATCAAGGTAACCTCCACGGCAATTAGCGCCTTCGTGAACAATCCGTTGATGCAGCACACGCCCGTGAAGGTGGGTCAAACCACCATAAAGCCGCTCCATCCGCAGCTGCCAATGGAGAAGAAGCCAATGACGGACTCGGCTCCACCGCCGCTCGCCCCACTCAGTGGGTCCAATGTGTTGACAAAGGACGCGCAAGGACGCACCGTAATTATACAATCTAAGCGGAAGCTTACTATCGACGACGAGCAAAATAAGCGGTTGGCGCTGGAGAGCAGCAATGCATCCACTGGCAAGGACGAGCCGCAGGTGACGCCCTCCAAGAATGCTGCCAATCTCTATGCGGATTTGGCTGCCTCCATACTAGAGGATGAGGACTTGGATGACGTGCCGCCGTTGGCAGCCTCCAGTCAAGAGCAGCAACCCACgcctcagcaacaacaacaacaacagcagcagcaacaattgcagctaaTCTCAGCCAAGGTGCACTCCACACAGCGGCAACTCATCTTTCCCACAGGCAACTCgccggcgccgccgccgcagttGAAATTGGCGACAACGGCAACCATTAAAACGGATCAGGGGCTGCAGACGGTGCCGGTCATACTGCAGCAGAAGAcggatcagcagcagcagcagcagccgacgcAAACGCAGTACGTGCTGGCCACCAACCAGCAGGGGCAGACCTACTTGGTGGCGCAACAGTCGGCTCCAGTGGCAGCATCGGCCAATGCGCCCGGCACGCCCACTCTGCTGGTGACACAAGCGCCGCAGCAACAGACGAAGACGATCATCATACTTCAGCAGCCGCCCGGAGTGAGTAGCACCAATGCGCCTGGCACTCAGAAGGTCATAATGACGACAGCGCAGGGGCAGCAGGTGCTGGTGACCACTACTACGGCGCCTGCTGCGGCGGTGCGCCCTGCCAGCCaggtccagcagcagcaacagcagcagcaaatttttATAAACCCGCAACGTGCAGTCTCCGCCGCATTGGGCGCGGGTCAAATGTCGCCTTCGCTGCTGTCACAGCTTAACCAGATACCTGCAACCATAAAGCTGCATCAGCCGCAGCCGGCGCAAGCCGCACAGCTGCATCGGGGCGGCATCGTTGCCAGCAAAACAGCGCCCATacctcagctgcagcagcatcagtcCATCATTCAGCAGCACATAATCTCGAGtccagcagctggcgcagacaagcggcagctgctgctgggcggcaTCAAGGAGACGACGCTCATTACCCAAACGCCCGCAACGGCTGCCCCCTTGCAGCAGAGTCAGCTCAATTCGCAGACAATCATAACCACCCAGCCACCGGTGGGCGCCACGTCTGTCGTGGGcgctgcactgcagcagcagcagcagcacatacgcagcgtgctggagcagcagcaacagcaccatcCCTCCATCATACAGCAGAAGATTACGATGCCCATCGCGCTCACGGAAGCGGCCAAAGCGAAGCCTGCGCCAGTAATACCCATTGCTAAGAAGCCGATGCCACCGCCCACATCGTCTGCCTCTCCTGCGCAACAGCATCCGGTGCAAATGCCTGTGCTGAAGCCCACTCAACAAGGGCAGGCGGCCAGCGGCGAGTCGAAGCCGACAATGGTAGTGGAATCAAAACCAGTGGAGTCACAGGCTGCCACAGCAGTAACAGTCGCTAACCCATCGACTGGGGCAACAGCAGTTGCcactgcaacaacagcggcaacgaGTATTGCAAGCAACACCAATTCCTCAGCTACTCCGGCTGTGAGCGCTGTGCCCGTGGATGTGAATTGGCTGTTCATTTGTGATTGGCGCAATTGTCCGCGTCGGAAGTTCAAATCGCTCAACGAGCTGCAGCACCACGTCTGCAATGTGCACTGTCCGGATCATTTGGACTCGGGCGCGGAGATCTATTGCCAGTGGGGCAGCGGTCCAAGCCTGTGCGACAATATTGCTCGCAAGCGCTACTCGTTAATGACGCATCTCGTCGATCGTCATCTCGCGCTGGATGATTTGCGAGCCAGCGTTCAGCGACGCCTTGCCACTGGCATACACAATGTGTCGCCCGCACAGCCAACGGTCACCATAGTGCGTAATGTGGGCAGTGCCAATGCGCCGGtaacggcggcagcagctgctccatcgGCCGCTACTGCTGTCGGAACTTCTGCCCTGCAGGCAATCAAACGGCACTCGGCTGACTTTCTGAACTCGAAGGAGCTGATGGATGAGAACGAGGGGCCAGTCACAAAGAGCATTCGGCTCACGGCTGCCCTGATATTGCGGAATCTGGTCAACTACTCAGTGACGGCCAAGCGCAGCTTGAAGCGATACGAGCCGCATCTGGCCAATGTGGCCTTCAGCAATGTGGAGGCCAGTGGTGTACTCTCCCACATACTACACGAGCTGAGCCAGTAA
Protein Sequence
MTSIDSVRVLLQSLPAASPAAANNNNTQQNESTPAKLGAAGTPLRARNTQQQQLQAQQQLVFGTPEKPQSGDAPGTEDQQLSAPDEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWEEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVDLGASASRVRSRALAGGAIGGAGGSLTGSGLGSIFGMAHSTLTAVPMAYNQRQHIVNADRRRQYKMSTQLHKHSNYDKLLLSLISPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQHGHNNTGMLVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLISKESDAYDDYLFQSDELDFEMDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENVALLATNRTLWRYLVMGANVRWSNIHIQALETAGNLAHQFELLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSTLGARPCSMLAQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNVLSTLTQSLPSNQMTPLMAVKQPQQQPQSQPSAPIVSLPLPAPTQVQVLPPQPESVSLPVAAPAVAAPVTASVAIPAPIPLPLPLPLPVPSLPHVQLPVASLPQVQLPPPSTMQVPAPPAPASVALATTTVALPAAPSAPQSFTHDDETYALAWLGATYERPGNGHEYRVEQQELYTIYLSHCQKAGKHSVVNRLQFPRLVRLIFNATVGPAIVRQMDGTELPGTHYVGIRMRAQPLPVQQQQQQQPPQQQKVTTIAAAIVAKKEPTLTPKSDSAIGEAVEEVSATPTNTPTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTASSTGSSAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPMEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDDEQNKRLALESSNASTGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQEQQPTPQQQQQQQQQQQLQLISAKVHSTQRQLIFPTGNSPAPPPQLKLATTATIKTDQGLQTVPVILQQKTDQQQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAASANAPGTPTLLVTQAPQQQTKTIIILQQPPGVSSTNAPGTQKVIMTTAQGQQVLVTTTTAPAAAVRPASQVQQQQQQQQIFINPQRAVSAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQAAQLHRGGIVASKTAPIPQLQQHQSIIQQHIISSPAAGADKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPVGATSVVGAALQQQQQHIRSVLEQQQQHHPSIIQQKITMPIALTEAAKAKPAPVIPIAKKPMPPPTSSASPAQQHPVQMPVLKPTQQGQAASGESKPTMVVESKPVESQAATAVTVANPSTGATAVATATTAATSIASNTNSSATPAVSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVSPAQPTVTIVRNVGSANAPVTAAAAAPSAATAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSVTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00586461;
80% Identity
-