Drep005741.1
Basic Information
- Insect
- Drosophila repleta
- Gene Symbol
- retn
- Assembly
- GCA_018903745.1
- Location
- JAEIGN010000497.1:11700327-11711566[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-26 4e-23 81.4 0.0 2 89 20 105 19 105 0.96
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTATGAAATCAACGATGATCCCAAGCGCAAGGAATTCCTGGACGATTTGTTTTCGTTTATGCAAAAGCGCGGCACACCCATCAATCGGCTGCCCATCATGGCCAAATCGGTGCTGGATCTGTATGAACTGTACAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATTTGCCATCGAGCATCACCAGTGCCGCCTTCACGCTGCGCACACAATACATGAAGTATTTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTCCAGGCGGCCATCGATGGCAACCGGCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCGATGCACAATCAGATGCCGCTGACTCCCATTTCGCGTCCATCTCTGCCTGGTGGCATGCAACAGATGTCGCCTCTGGCTCTGGTCACACACGCCGCGGCGGCCAACAATCAGCAGGCGCAGGCAGCGGCAGCAGCCGCCGCTGCGCACCGCCGACTGATGGGCGGACCGGCGTTTGGCCAGATGCCCAATCTGGTGACGCAGGAGATCGAGAACCGCATGATGGACAGTCCGAATGGCTCGGCGCACACCTCACCACAGCAGCGCGAAGCCCTGAACCTCTCCGATTCGCCGCCAACTTTGAATCTGAATCACATAAAGCGAGAACGCGAACGCGATCCGACGCCGGAGCCTGCGGATCAGGACGAGACACCGCACCAGCCGCCGCCCGCCAAGCGCGTGGGCAGCGGCCTGATGCCACCCGGTTTTCCCGCTAACTTCTACTTGAATCCACACAACATGGCCGCTGTGGCAGCCGCCGCCGGGTTCCATCACCAGGCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCGTCCGACGGCGAGCCAGAGGATGAGTATAGCAATGCTGAGCACAATACCACCGGCAACTCCTCGTCCATGCACGATGACAGCGAGCCACAGCAGCTGAACGGGCATCACGAGCTCGACCATCATGATCATCATCACCATCACCATCATCATCATCATCAGCAGAATCATCTGGATAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACCACGGCGTCCGCATCGGGCGGCCATCGTCACAGCTCGCCGGTCTCGACCAAGAAGAAGAGCGCCGCGAGCAAGGCACAATCCAGCCCCAAGGACACGCAGCACGACAACTGCACAGCCGGCGGCAGCAGCGGAGCAGGGGCCGGTGGCGTCAAGCTAAGCCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCACCGGCGCAAACGGCGAGCAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGCGTGCTGGTGGCCAATGCAGGCGGGCTGGAGCGTCAGGAGCTGGGGCCCGAGTCGGACAGCGATGCAGTTGTGCCCGCTGTAGAGGACGCAGTCGAGGAGCCAGCGCCCGTGGAGGTCAAGGAAGAGGGCAGCCAGGAAGTGGGCCAGCCAGAGGCAGCAGCAACAGCAGCTGAGGAGGAGGAGGACGACGAGGAGGAGATGCAGCAACAGCAGCAGCAGCCAACTGAAGACATTGTCAATGGGGGCGTAGGATTAGGTGTGGGCGTGGGCGTGGGTGTGGGCGTGGGGTCGCTGCTGAAGGATGCTGTGGCCAGTTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMDSPNGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQDETPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAXXXXXXXXXXXXXXXXXXXXXXXAASDGEPEDEYSNAEHNTTGNSSSMHDDSEPQQLNGHHELDHHDHHHHHHHHHHQQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSAASKAQSSPKDTQHDNCTAGGSSGAGAGGVKLSPLETLSLLSGMQFQVARNGTGTGANGEQQLIVNLELNGIKYSGVLVANAGGLERQELGPESDSDAVVPAVEDAVEEPAPVEVKEEGSQEVGQPEAAATAAEEEEDDEEEMQQQQQQPTEDIVNGGVGLGVGVGVGVGVGSLLKDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00568035;
- 90% Identity
- -
- 80% Identity
- -