Basic Information

Insect: Drosophila rellima
Gene Symbol: -
Assembly: GCA_035043635.1
Location: JAWNMV010000811.1:14564638-14568679[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.7e-05 0.0068 16.9 0.1 1 23 160 183 160 183 0.96

2 14 0.0015 0.11 13.1 2.9 2 23 232 254 228 254 0.89

3 14 0.19 13 6.5 1.2 1 23 358 381 358 381 0.92

4 14 0.43 30 5.4 5.6 2 23 430 452 429 453 0.95

5 14 0.0035 0.24 12.0 0.5 1 23 518 541 518 541 0.88

6 14 8 5.6e+02 1.4 0.0 2 13 560 571 559 576 0.81

7 14 0.00073 0.051 14.1 3.3 2 23 592 614 592 614 0.96

8 14 0.0016 0.11 13.1 0.1 1 23 722 745 722 745 0.95

9 14 0.00011 0.008 16.6 0.2 1 23 813 836 813 836 0.92

10 14 0.0012 0.086 13.4 2.2 2 23 886 908 885 908 0.97

11 14 0.002 0.14 12.7 2.0 1 23 997 1020 997 1020 0.92

12 14 0.056 3.9 8.2 1.5 1 21 1072 1092 1072 1093 0.95

13 14 4.2 3e+02 2.3 0.1 3 23 1142 1165 1142 1165 0.74

14 14 2.5 1.7e+02 3.0 0.5 1 10 1183 1192 1183 1207 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.7e-05	0.0068	16.9	0.1	1	23	160	183	160	183	0.96
2	14	0.0015	0.11	13.1	2.9	2	23	232	254	228	254	0.89
3	14	0.19	13	6.5	1.2	1	23	358	381	358	381	0.92
4	14	0.43	30	5.4	5.6	2	23	430	452	429	453	0.95
5	14	0.0035	0.24	12.0	0.5	1	23	518	541	518	541	0.88
6	14	8	5.6e+02	1.4	0.0	2	13	560	571	559	576	0.81
7	14	0.00073	0.051	14.1	3.3	2	23	592	614	592	614	0.96
8	14	0.0016	0.11	13.1	0.1	1	23	722	745	722	745	0.95
9	14	0.00011	0.008	16.6	0.2	1	23	813	836	813	836	0.92
10	14	0.0012	0.086	13.4	2.2	2	23	886	908	885	908	0.97
11	14	0.002	0.14	12.7	2.0	1	23	997	1020	997	1020	0.92
12	14	0.056	3.9	8.2	1.5	1	21	1072	1092	1072	1093	0.95
13	14	4.2	3e+02	2.3	0.1	3	23	1142	1165	1142	1165	0.74
14	14	2.5	1.7e+02	3.0	0.5	1	10	1183	1192	1183	1207	0.64

Sequence Information

Coding Sequence: ATGGAAGGTATGGACTTGTGGACGTCTatgttttcgactgattttgAGGAGGGGGACGGCGAGGGAGATAATTACAATCATGGCAATAACGCACACGCAGACGAGTTTATGGGtgatgatgaggaggaggtTGACATAGACGAaatggatgatgatgatgatgaaaatgaTAGGGAACGACGCGGAAAACAAAAGGGACACGAACCTGATGATGATGCCATATTTGATTTCGAACTGGAGCCTATTGTTAACATTGCTGAGCCAGAACCAGAGTCAGCGCGAAGAGGAGCTGTCGCATTGGCGCCACCAATGCCATCCGGACCGCCTGTAAGGGCTATACACCACCGTCAATCTCTGCCAGCTTCATTTGGACCCCGAGGATCTAGCGCTGGAGCAGCTCCAACGCGTCCAACGACATCACAAATCAATGCCACCGATGAAAACGgagtttcaattaattatgaattgggtgttatttacatatgtcCCGCATGCGGCGCCGAATTCCGGCAGCAGGACATGTGGAAACGTCATATGAACCAGATGCATCAATTTAATACACGCAAGGGACTCAATTTTGTTGCCATCGATAAGCTGTATCATCGGTGTCTGGAGTGCAACAAGCGCATTGCCATGCATAGTCGGGAGAATCTGCTCAAGCATAAGTTTACCCATTTGCCATATCGGTGTACCAAGTGCTATATATGTAAACGAGAGTACAAATACAGGCAGGACCTGATGGTGCATCTGCGTATGGTGCACTGTGATGAGGTCGTGGCAATGATGCGGGAAGGCGATGGCACCGCAGGCAGGAAAACCCGTGTGCGTGAACCGCGCACCGAGCCACACTTGGCACTTCCAACTGCCCCAGTccatgacgatgatgatggtCTAGAAGTGAGGAGTGAACATATTGAGGCAGACAGTGCCACAGGCATTGAGGCCAACATCAGTTTGGGTGGCGATATGAGTCGCAGCTCATTAGCAAAGCGGAAGCGTGGTAATCCCAGTGCAGGCAATgggaatggcaatggcaacagtgCTGCAGATATATGTGAGGATTACATACACTATATGTGCCCGGAGTGCAGCACAGATTGCGACACGCATGCCCAATGGAGTCAACACATTGAATTCGTGCACGATTATGTCAGCAGGCGAGGCCTCAACTTTCGTTGCGTGGATATGCAGATGCAGTGTCTGGAGTGCAAACAGTTTGTTATACCGAACACGATCAAGACATTGCGGGCTCACAAGTTTAGTCACTTGCCTCAGCCGGAGTGGATGCGATGCAAGCTGTGCTACAAGGGTTATACGGAGCATCATGAACTGGTGACGCATCTGCTCAAGCAACACCATCTAGAAACTTTAATGCCAGACGCTGAGGAGACGGAGGAGCCGCTGCCCAGTGTCAATGCAGGAGATGATGGCGAGGACAACGCACCCGATGGTAACGATAATGGCTGCGATGATGACTTGTCGCAATGGGATGAAGCACCACGTCGTGGCGGACGCATAAGTAGCGATGATATGTACGAGCCCCACATTGACTATCTTTGTCCACAGTGTGGCAGGGAATTCATCGAGAAGAAACACTGGCGCACTCATGTAGTCCAGGTGCATGGAATGAAcgatttggccaagttgaacTTTGAAGTGATCAACGATAGGCAATTGAAATGCACTGAATGCGAGAAGATCATCACGAATGCATATGGCATACAGAATGCACAACAGCATCGGATTACGCACCTGCCGTACAAGGCATATGCACGCTGCCGCAAGTGCCACAAATCGTATACGGATCGCAAGGGATTGGTTAAGCATTTGGCCACATATCATCGTGTCGGATACGAGCCGCGTAAAGTTGATGGAGGTGCGGAAATGAGTACGGGCAGCGGCTTGCGCTCGTCTTTAAGTGGGCAAGCATCATCCAAGTCGCAAACGCCTCGTAAACAAATTGTCACGGTGGCAAATGAAACATATGAGATTATATATTTGGATGAGGATCAATCATCGCCCGGTAACAATAACATAAACGAGGAGAACGATTTTGGCGAACAAATGCAAGGAGATGATGATGAATATGTCCCTAGTTTCAGCAGTCGTCAgttgccgcctgctgttgcTCCCAATCCTAATCCCACTTCCAATCCCAATCGCTACAAGTGCGTTGACTGCGGCTCCTTGTTTCCCACACAGGTGGCACTCAAAACGCACATTAGCGAGGAGCATGATTTTATGGATACACAATACAGTGCCAAAAAGTTTGATAACGCTGAACCAACTGATGAGGCAGCTTCCGCTTCAGTTTCAACTCAAGAGCCTGGCGCATCAGCGGTTGCCTCAGGAAAAATATCATCACCCTCAAGTAGCAGTAAGAAGATAGCACAAATCAATAGCTCGGGTACATCGACCATTgagcaaaattatattttcctgTGTCCATCGTGCGGCAAGGCGTACAAGACACAGTTTGAGTGGCGTCGTCACATCAATGATGCGCACAATTTCGACAAGCgtgaatatttgaatatgcgTCAGTTGGATAAGTATCGTTATCAATGTACTCAGTGCAAGGATATTGTGAGCAGTTCAAAATTGAAGGGCCTGCAGGATCATCACTTTCGCCATCTGCCCTATCGACTGTATCTGAAGTGTCTCGTCTGTGGCACATGCTACAATCACAAGCCCAACATTGCGGCTCATCTGCGCACTCGTCACAATGTCTTCGAACGTGATACGCCGTGGCGTGAGCTGCAAAACAAGCCACAGTACAACTATGTGAATACAaaagacaaggacaaggaTAGAGAATCTCGCGGAATATCCTCTACATCATCATCGCCGACGCCTGGAAGCAGTAGCAATTTTATGGGACGATCGCTAAAACCGCAGCCAGGCTGCCTGCCCAACCGACCGGCTGGACTTAATACGTTGGAGGAcagcatttcatttcataatgCTGTGGATATGGACTTTATCACGTACTATTGTCCCAAGTGTAACAAGAACTTTGATTCACATGCCTTCTGGCGTAAACACATCGTGGAACAACATAATTTCAACAGTCGCCAGGGACTGAACTTTCGTCAGATCGACATGCATCACTACTTGTGCCTCGAGTGCTATAAGCGTGTGACTGTCACCCATACAAAGGGCGCCATCGGGCAGCTCCAGTCGCACAAGTTCCGACACTTGCCCTATCGCTCTTTCAAATGCTTGACCTGCAATGGAGAATTTGTGCGCAAGCAAATGTTCTTTAAGCACTTGAATCGCGACACAAATCGCTGTGACAGCAAACCACTCGGAGTccaggacaacgacaacgatggtCCAGAGCAGCATGAGAGCATTACTGGTGGAGATGATGCTTCTGTGCCAGCTGCTGTGGAAGTCGATCCCGCTACCTATCGGCTATGGTGCCCCCAATGTGGCGATAACTTTGTCACCAGCAGCAAAGCGCTTTGGCGTGAACACATTAACGCTTATCATGGCCTGGGCAAGCGAGAGACGCTCCATGTGCAAAGAGTGAGCAATAATCTATATCGCTGCACGGACTGTGATGAGCAGTTGCAAACGAAGCAACTACGGGTGCTGCAGGAGCATCGATTCAAACATCTGCCCTATGCCGCTTATATACGCTGCCAGTTATGCGAAAATCAGCCGGATGAACTGGGTCATGGGGCTGTTGCAGCCGGTCTGCACAGTATGCAAGAGTTGCAGCAACATATACGCGACAAGCATCCCGACGTATCCGAGAATGATGAACAAATGCAATCGCTACTTGATGATGAGGACAGCCAGCTGGCGCGCAATGAGTCGACTGGCAATGGCCGATATATGCCACTGCCGCCGCATTTGCTGGATGATGATGTCGAGGACATGGGTTTTGAGGCACAGTATCTGCTGGGCTAG
Protein Sequence: MEGMDLWTSMFSTDFEEGDGEGDNYNHGNNAHADEFMGDDEEEVDIDEMDDDDDENDRERRGKQKGHEPDDDAIFDFELEPIVNIAEPEPESARRGAVALAPPMPSGPPVRAIHHRQSLPASFGPRGSSAGAAPTRPTTSQINATDENGVSINYELGVIYICPACGAEFRQQDMWKRHMNQMHQFNTRKGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGDGTAGRKTRVREPRTEPHLALPTAPVHDDDDGLEVRSEHIEADSATGIEANISLGGDMSRSSLAKRKRGNPSAGNGNGNGNSAADICEDYIHYMCPECSTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKQFVIPNTIKTLRAHKFSHLPQPEWMRCKLCYKGYTEHHELVTHLLKQHHLETLMPDAEETEEPLPSVNAGDDGEDNAPDGNDNGCDDDLSQWDEAPRRGGRISSDDMYEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNDLAKLNFEVINDRQLKCTECEKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRVGYEPRKVDGGAEMSTGSGLRSSLSGQASSKSQTPRKQIVTVANETYEIIYLDEDQSSPGNNNINEENDFGEQMQGDDDEYVPSFSSRQLPPAVAPNPNPTSNPNRYKCVDCGSLFPTQVALKTHISEEHDFMDTQYSAKKFDNAEPTDEAASASVSTQEPGASAVASGKISSPSSSSKKIAQINSSGTSTIEQNYIFLCPSCGKAYKTQFEWRRHINDAHNFDKREYLNMRQLDKYRYQCTQCKDIVSSSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNVFERDTPWRELQNKPQYNYVNTKDKDKDRESRGISSTSSSPTPGSSSNFMGRSLKPQPGCLPNRPAGLNTLEDSISFHNAVDMDFITYYCPKCNKNFDSHAFWRKHIVEQHNFNSRQGLNFRQIDMHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDSKPLGVQDNDNDGPEQHESITGGDDASVPAAVEVDPATYRLWCPQCGDNFVTSSKALWREHINAYHGLGKRETLHVQRVSNNLYRCTDCDEQLQTKQLRVLQEHRFKHLPYAAYIRCQLCENQPDELGHGAVAAGLHSMQELQQHIRDKHPDVSENDEQMQSLLDDEDSQLARNESTGNGRYMPLPPHLLDDDVEDMGFEAQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00602113;
90% Identity: iTF_00602113;
80% Identity: -