Dqui002173.1
Basic Information
- Insect
- Drosophila quinaria
- Gene Symbol
- stc
- Assembly
- GCA_035047525.1
- Location
- JAWNPO010000118.1:598-5050[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.3 1.5e+04 -3.5 0.5 15 18 280 283 279 284 0.79 2 15 1.8 2.1e+04 -4.0 1.6 15 19 307 311 306 311 0.81 3 15 0.052 6e+02 1.0 2.0 4 11 340 347 339 348 0.90 4 15 5.4e-07 0.0062 16.9 15.1 1 19 352 369 352 369 0.93 5 15 1.8e-09 2e-05 24.8 13.3 1 18 405 422 405 423 0.98 6 15 2 2.3e+04 -6.1 4.1 7 13 427 433 427 434 0.77 7 15 1.8e-09 2.1e-05 24.8 12.9 1 19 463 481 463 481 0.98 8 15 1 1.2e+04 -3.2 0.5 5 10 511 516 511 516 0.90 9 15 5.4e-05 0.62 10.5 16.0 4 19 529 544 522 544 0.86 10 15 1.4 1.7e+04 -3.7 14.7 1 11 584 594 584 606 0.79 11 15 2.6e-10 3e-06 27.5 15.1 1 18 611 628 611 629 0.97 12 15 2 2.3e+04 -4.2 1.2 6 10 658 662 658 662 0.88 13 15 2 2.3e+04 -7.6 9.9 10 18 676 685 665 686 0.76 14 15 5.7e-06 0.066 13.6 12.4 1 16 722 737 722 747 0.94 15 15 1.7e-07 0.002 18.4 14.5 1 19 754 773 754 773 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGTATTGGccgcagcaggagcagcagcagcagcagcagatgaACGGATCTTCAGCAGCTCGGAATGACTCCAATGTGACGGCCTACAACAACATTGGCGCTGGCGGCGGTGCCTTTGGGCCGTCCCCCACCCCTGCAGCCGCCcctggcaacaacagcaacaacagttttaACGGACCTTATGTGGGCTACCACCTAAACGGCGATGGAGGAGGAGCGAGCGGATCGAGTGCTTATCCCAATCCGTATAATCCCTTTGCCTCAGGCAGCCACTTTGACTTCAGCACATCGAAGCTGCAGGCGTCTGCGCCTGAGTTCGTGCCCAGCCTGGCCAAGCTCAGTCTGAGCCAGGAGGCGTCcaacagcagaaacaacaacagcactgCCAATCAGCAACAAAGTCAACAGCAGCCAAGGCTGCCAAAGGCCCATGGCACCAACAGCGGTCGACAGCAGCGTCGGAACGACTATCGGGAGGATCGAGTGGAGCGCCACGAGGATCGCTATGACCGCAAGAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAACAAGCGACGCGATGACTGGAATCGTAATCGGGATCGCATCAATGGCTATCCACGTGCCGCCGAGGAGCTggacaccagcaacagcaacgacagcgCACATCCCTCGCCggagaagcaacaacagccgcaACAACCGCAGCAAATCTCGCCGAGACGAGCGCCGGACAATGAGAAGCTCTCCCAGCGCGAGAAGCTGATGCGCGACATCGAGCAGCGGCGTCTGGAGTGTCTGGTGTGCGTGGAGCAGATCAAGGCGCATCACGGCACCTGGTCGTGCCAGAACTGCTACCACGTGCTGCATCTCAAGTGCACCATCACGTGGGCGAGCAGCTCCAAGTCCGCCGAGGGCTGGCGCTGCCCCGCCTGCCAGAACGTGCTGGAGGAGCTGCCGCGCGAGTATCTCTGCTTCTGCGGCAAGCTCAAGAATCCGCCCCTGACGCGCTCCGAGCTGGCGCACAGCTGCGGCGAGCTCTGCTGCCGCGTCGAGGGCTGCAGCCACGCGTGCACCCTGCTCTGCCACCCGGGGCCGTGTCCGCCGTGCCAGGCGAACGTGAGTCGCAGCTGCGGCTGCGGACGCACCAGCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGCCGCGATCTGCGACAAGCCGCTCAACTGCGGCGAGCACCGTTGCCAGCAGATCTGCCACGCCGGCAAGTGCGAGCCGTGCGCGGAGCAGGTGCAGCAGCACTGCCACTGCGGCAAGCAGCAGCGCGAGGTGCAGTGCACGCGGGAGAGCCAGGACAGGCGCAGCTACTCGTGCAAGGAGTGCTGCGGGAAGGCGTTGCCCTGCGGCAATCACAAGTGCAAGGACTCGTGCCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCGCGCAGATCACGAGCTGCCCGTGCGGCAAGCTGCCCGTGGCCGCGGAGCAGCGCAGCAGCTGCCTGGACGCGGTGCCCACGTGCGAGGGCGTCTGCGGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCAGCAGCCGGTGCCACCTGGGCCAGTGCCCGCCCTGCACCAAGCAGACGGCGGTCAAGTGCCGCTGCGGCCACATGGACCAGCTGATCAAGTGCCGCCAGCTGTCGACGCGCGCGGACGACGCCCGCTGCAAGCGGCGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCCACGCCGAGTGCTGCATCGACATCGACCACGCCTGTCCGCTGCCCTGCAACCGGACGCTGAGTTGTGGCCGCCACAAGTGCGACCAGCCGTGCCACCGCGGCAACTGCCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGCGCCGAGGTCATCTATCCACCCGTGCCCTGCGGCACCAAGAAGCCCCTCTGCAAGCGACCCTGCTCCCGCACCCACGGCTGCGAGCACCCGCCGCAGCACAACTGCCACGCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCCACCACGAGCAGCGCAAGACCATTCCCTGCTCCCAGGGCAACTTCAGCTGCGGCCTCGCCTGCGCCAAGCCGCTCGGGTGCGGACGCCACAAGTGCATCCGGCCCTGCCACGAGGCCGACTGCCAGCAGGCGGGCGAACTGTGCCGCCAGAGCTGCACCAAGCCGCGCCTGCTCTGTGGCCACAAGTGCGCGGCGCCCTGCCACGACGGCGACTGCCCGGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAACCGCAGGCAGAACCGCAGCTGCCAGGAACTGGCTCGGGAGCACAGCCGCATCGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATGTCGCGGGGCAACTACATGGAGCTCAGCGAGATTCTGGCGCCCACCaaaacaatcaaatcaaacaaaacACTGGATTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGTCGTTTGGCCATTGGATTGCAGTCGCGTAATCCGGAGACGCAGTTGAAGTCCCTCACCAAGTACTCGGAGTTCACACGCGGATTTGCCAAGCGCAATCCAGCGCTAACCAAGAGCGTCTACGAAACGCTAAGCGATTTGGTAAAGCTGGCCAAGGAGAGCAAGCAAAAGTCAAGAAGCCACTCGTTTCCCACAATGAACCGGGAGAAGCGTCAATTGGTGCACGAACTATGCGAAGTCTTTGGCGTGGAGTCCGTCTCCTACGACAAGGAGCCTAACCGcaatgttgttgctactgcacACAAGGAGCGGTGTTGGTTGCCCGCCACAAGCATCATGGAGGTTTTGGCTCGCGAATCCGGACAGCGTCGCGTTCCAGTTCCCAGCAATAATGCCTGGGGTCTCAAAAAGTAG
- Protein Sequence
- MAEYWPQQEQQQQQQMNGSSAARNDSNVTAYNNIGAGGGAFGPSPTPAAAPGNNSNNSFNGPYVGYHLNGDGGGASGSSAYPNPYNPFASGSHFDFSTSKLQASAPEFVPSLAKLSLSQEASNSRNNNSTANQQQSQQQPRLPKAHGTNSGRQQRRNDYREDRVERHEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAHPSPEKQQQPQQPQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRSELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCAAICDKPLNCGEHRCQQICHAGKCEPCAEQVQQHCHCGKQQREVQCTRESQDRRSYSCKECCGKALPCGNHKCKDSCHAGACRPCKLSPAQITSCPCGKLPVAAEQRSSCLDAVPTCEGVCGKTLRCGKPAHPHQCSSRCHLGQCPPCTKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCHAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRTHGCEHPPQHNCHAAATCPPCMMFTTKWCHGHHEQRKTIPCSQGNFSCGLACAKPLGCGRHKCIRPCHEADCQQAGELCRQSCTKPRLLCGHKCAAPCHDGDCPETPCKELVEVQCECGNRRQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTIKSNKTLDCNEECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -