Basic Information

Insect: Drosophila quinaria
Gene Symbol: -
Assembly: GCA_035047525.1
Location: JAWNPO010000415.1:1662134-1666926[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00048 0.038 14.8 0.1 1 23 158 181 158 181 0.96

2 14 0.0017 0.13 13.1 2.9 2 23 230 252 226 252 0.89

3 14 0.21 17 6.5 1.2 1 23 355 378 355 378 0.92

4 14 0.24 19 6.3 5.8 2 23 427 448 426 449 0.95

5 14 0.0038 0.3 12.0 0.5 1 23 519 542 519 542 0.88

6 14 2.3 1.9e+02 3.2 0.1 2 14 561 573 560 585 0.85

7 14 0.0008 0.064 14.1 3.3 2 23 593 615 593 615 0.96

8 14 0.0027 0.21 12.4 0.1 1 23 723 746 723 746 0.95

9 14 0.00013 0.01 16.6 0.2 1 23 810 833 810 833 0.92

10 14 0.0014 0.11 13.4 2.2 2 23 883 905 882 905 0.97

11 14 0.0022 0.17 12.7 2.0 1 23 994 1017 994 1017 0.92

12 14 0.061 4.9 8.2 1.5 1 21 1069 1089 1069 1090 0.95

13 14 5.2 4.1e+02 2.1 0.1 3 23 1135 1158 1135 1158 0.81

14 14 2.7 2.1e+02 3.0 0.5 1 10 1176 1185 1176 1200 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00048	0.038	14.8	0.1	1	23	158	181	158	181	0.96
2	14	0.0017	0.13	13.1	2.9	2	23	230	252	226	252	0.89
3	14	0.21	17	6.5	1.2	1	23	355	378	355	378	0.92
4	14	0.24	19	6.3	5.8	2	23	427	448	426	449	0.95
5	14	0.0038	0.3	12.0	0.5	1	23	519	542	519	542	0.88
6	14	2.3	1.9e+02	3.2	0.1	2	14	561	573	560	585	0.85
7	14	0.0008	0.064	14.1	3.3	2	23	593	615	593	615	0.96
8	14	0.0027	0.21	12.4	0.1	1	23	723	746	723	746	0.95
9	14	0.00013	0.01	16.6	0.2	1	23	810	833	810	833	0.92
10	14	0.0014	0.11	13.4	2.2	2	23	883	905	882	905	0.97
11	14	0.0022	0.17	12.7	2.0	1	23	994	1017	994	1017	0.92
12	14	0.061	4.9	8.2	1.5	1	21	1069	1089	1069	1090	0.95
13	14	5.2	4.1e+02	2.1	0.1	3	23	1135	1158	1135	1158	0.81
14	14	2.7	2.1e+02	3.0	0.5	1	10	1176	1185	1176	1200	0.64

Sequence Information

Coding Sequence: ATGGAAGGCATGGACTTGTGGACGTCCATGTTTTCGACTGACTTTGAGGAGGGGGACGTCGAGGGAGatgataattataatcatGGCAACAACACGCACGCAGACGAGTTTATGGGCGAAGAGGAGGAGGGCGATATAGACGAGattgacgatgatgatgacaatgatgGGAAACAAAAGAGACACGAGCCTGATGACGATGccatatttgattttgaacTGGAACCAATTGTTAGTATTGCTGAgccagagagacagagagaaccAGGATCGGCGCGAAGAGGAACTGTCGCATTGGTGCCACCAATTCCAACCGGGCCGCCTGTGCGGGCTTCACACCGTCAATCGCTGCCAGCTTCATTTGGGCCACGAGGATCTGGTGCTGGGGCAGCTGCAACGCGTCCAACAACATCCCAGATCAATGCCACCGATGAAAACGGAGTTCCAATCAATTATGAATTGGGcgttatatacatatgtccTGCATGCGGCGCCGAATATCGGCAGCAGGACATGTGGAAGCGTCATATGAACCAGATGCATCAGTATAATACACGCAAGGGACTCAATTTCGTTGCCATCGATAAGCTGTATCATCGGTGCCTGGAGTGCAACAAGCGCATTGCCATGCACAGTCGGGAGAATCTGCTGAAGCATAAGTTTACCCATTTGCCATATCGGTGCACCAAGTGCTATATATGTAAGCGAGAGTACAAATACAGGCAGGACCTGATGGTGCATCTGCGCATGGTGCACTGTGACGAGGTCGTGGCCATGATGCGCGAAAGCGATGGCACCGCCGGCAGGAAGACCCGTGTGCGTGAACCCCGCACCGAACCACTCGTTGGACTCCAAGCTGCCCCAGTtcatgacgatgacgatggcaTAGAAGTGAGGAGTGAACATATTGAGGCGGATAATGTTTCCTTAGGCGTGGAGGCCAGCATCGGTTTGGATGACGATCAGAGTCGCAGCTCATTGGCCAAGCGGAAGCGTGGCAATCCAGGTGCGGGCAATGGAAATGACAGCAGTGCTGCAGATCTATGCGAAGACTACATACACTACATGTGCCCGGAATGCAGCACCGACTGCGATACGCATGCACAGTGGAGTCAGCACATTGAATTCGTGCACGATTATGTCAGCAGGCGAGGCCTCAACTTTCGTTGCGTGGACATGCAGATGCAGTGTCTGGAGTGCAAACAGTTTGTTATACCGAATACGATCAAGACGTTGCGGGCTCACAAGTTTAGTCACTTGTCGCAGCCGGAATGGATGCGCTGCAAGTTGTGCTACAAGGGTTATACGGAGCATCATGAACTGGTGACGCATCTGCTCAAGCATCACCATCTGGAAACTTTATTGCCCGATGCTGAGGAGACGGAGGAGCCGTTGCCAAGTGTCAGTGCCAGTGCCAATGCCGTAGATGATGGCGAGGATAACGCTGCAAATGACAACGATAATGTCTGCGATGATGACTTGTCGCATTGGGACGAGGCACCACGTCGTGGCGGACGCATAAGTAGCGATGATATGTACGAGCCTCACATTGACTATCTCTGTCCACAGTGCGGCAGAGAATTCATCGAGAAGAAACACTGGCGCACTCATGTAGTCCAAGTGCATGGCATGAACGATCTGGGCAAGTTAAACTTCGAAGTGATTAACGACAGGCAATTGAAGTGTACGGAATGCGACAAGATCATCACGAATGCTTATGGCATTCAGAATGCACAACAGCATCGGATCACGCATTTGCCATTCAAGGCATACGCCCGCTGCCGCAAGTGCCACAAATCGTATACGGATCGCAAGGGTTTGGTCAAGCATTTGGCAACATATCATCGGGTGGGTTACGAGCCGCGCAAAGTTGCTGGAGGTGCGGGAGTGAGCACGGGCAGCGGCTTGGGCTCGTCTGCCAGTGGCCAGGCGTCATCCAAGTTGCAGACGCCGCGTAAACAGATTGTCACTGTGGCAAATGAAACATATGAGATTATATACTTGGATGAGGATCAATCATCGcccggcaacaacaatattaacgAGGAGAACGATTTTGGCGAACAAATGCAAGGAGATGATGATGAATATATGCCCAGTTTCAGCAGTCGTCAGTTGCCGGTTGCTGTTGGTCCCAATCCTAATCCCACTACCAATCCCAATCGCTATAAATGCGTTGACTGCGGCTCCTTGTTTCCCACCCAGGTGGGACTCAAGACGCACATTAGCGAGGAGCATGATTTTATGGATACTCAATACAGTGCCAAAAAGTTTGACAACGCCGAACCGACTGATGAGGCACCTTCCGCCTCAGTTTCAACCCAAGAGCCTAGTGCATCTGCAAAGACATCATCAGCCTCAAGTAGCAGTAAGAAGATGGCACAAATCAATAGCTCGGGTGCATCGACCATCGagcaaaattatatattcCTGTGTCCATCGTGCGGCAAGGCATACAAGACTCAGTTTGAGTGGCGTCGTCACATCAATGATGCCCACAATTTCGACAAGCGTGTATATTTGAATATGCGTCAGTTGGACAAATATCGCTATCAATGTACTCAGTGCAAGGATATTGTGAGCAGTTCAAAGCTGAAGGGTCTGCAGGATCATCACTTTCGCCATCTGCCCTATCGACTGTATCTGAAGTGCCTCGTCTGCGGCACGTGCTACAATCACAAGCCCAACATTGCGGCTCATCTGCGCACGCGCCACAACGTCTTCGAACGTGATACACCGTGGCGGGAGCTGCAGAACAAGCCACAGTACAACTATGTGAATACGAAAGACAAGGATAAGGATAGAGAATCTCGCGGCATATCCTCGACATCATCATCGCCGACGCCTGGCAGCAGTAGCAATTTTCTGGGACGATCGCTAAAGCCACAGCCTGGCTGCCTGCCCAATCGACCGGCCGGACTGAATACGTTGGAGGAcagcatttcatttcataatgCTGTCGATATGGACTTTATCACGTACTATTGTCCCAAGTGCAACAAGAACTTTGATTCGCATGCCTTCTGGCGTAAACACATCGTGGAACAGCACAATTTCAACAGTCGCCAGGGTCTGAACTTCCGGCAGATCGACATGCATCACTACTTGTGCCTCGAGTGCTACAAGCGTGTGACTGTCACCCATACCAAGGGCGCCATCGGGCAGCTACAGTCGCACAAGTTCCGACACTTGCCCTATCGCTCCTTCAAATGCTTGACCTGCAATGGAGAATTTGTGCGCAAGCAAATGTTCTTCAAGCACTTGAATCGCGACACAAATCGCTGTGACAACAAACCACCCGGTGCCCAGGAGAACGACGAGCAGCATGAGAGCATTGCTGGTGGAGACGAGGCTTCTGTGCCAGCTGCAGTGGAAGTCGATCCCGCTACCTATCGACTGTGGTGTCCCCAGTGTGGCGATGACTTTGTCACCAGCAGCAAAGCGCTTTGGCGTGAACACATTAACGCCTATCATGGCCTGGGCAAGCGAGAGATGCTCCACGTGCGAAGAGTGAGCAGTGATCTGTACCGCTGCACGGACTGTGACGAGCAGTTGCAAACGAAGCAACTTCGGGTGCTGCAGGAACATCGTTTCAAGCATCTTCCGTATGCCGCCTATATACGCTGCCAGCTATGCGAAAATCAGCCTGATGAACTTGGTCATGGAGCTGTTGCAGCCGGTCTGCACAGTATGCAAGAGTTGCAGCAACACATACGCGACAAGCATCCGGACGTAACCGAGAATGATGAGCAAATGCAATCGCTACTTGATGATGAGGACAGCCAATTGGCGAACAATGAGTCGACTGGCAATGGCCGCTATATGCCGCTGCCGCCGCATTTGCTGGATGATGATGTCGAGGACATGGATTTTGAAGGACAGTATCTGCTGGGTTAG
Protein Sequence: MEGMDLWTSMFSTDFEEGDVEGDDNYNHGNNTHADEFMGEEEEGDIDEIDDDDDNDGKQKRHEPDDDAIFDFELEPIVSIAEPERQREPGSARRGTVALVPPIPTGPPVRASHRQSLPASFGPRGSGAGAAATRPTTSQINATDENGVPINYELGVIYICPACGAEYRQQDMWKRHMNQMHQYNTRKGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMRESDGTAGRKTRVREPRTEPLVGLQAAPVHDDDDGIEVRSEHIEADNVSLGVEASIGLDDDQSRSSLAKRKRGNPGAGNGNDSSAADLCEDYIHYMCPECSTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKQFVIPNTIKTLRAHKFSHLSQPEWMRCKLCYKGYTEHHELVTHLLKHHHLETLLPDAEETEEPLPSVSASANAVDDGEDNAANDNDNVCDDDLSHWDEAPRRGGRISSDDMYEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNDLGKLNFEVINDRQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRVGYEPRKVAGGAGVSTGSGLGSSASGQASSKLQTPRKQIVTVANETYEIIYLDEDQSSPGNNNINEENDFGEQMQGDDDEYMPSFSSRQLPVAVGPNPNPTTNPNRYKCVDCGSLFPTQVGLKTHISEEHDFMDTQYSAKKFDNAEPTDEAPSASVSTQEPSASAKTSSASSSSKKMAQINSSGASTIEQNYIFLCPSCGKAYKTQFEWRRHINDAHNFDKRVYLNMRQLDKYRYQCTQCKDIVSSSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNVFERDTPWRELQNKPQYNYVNTKDKDKDRESRGISSTSSSPTPGSSSNFLGRSLKPQPGCLPNRPAGLNTLEDSISFHNAVDMDFITYYCPKCNKNFDSHAFWRKHIVEQHNFNSRQGLNFRQIDMHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNKPPGAQENDEQHESIAGGDEASVPAAVEVDPATYRLWCPQCGDDFVTSSKALWREHINAYHGLGKREMLHVRRVSSDLYRCTDCDEQLQTKQLRVLQEHRFKHLPYAAYIRCQLCENQPDELGHGAVAAGLHSMQELQQHIRDKHPDVTENDEQMQSLLDDEDSQLANNESTGNGRYMPLPPHLLDDDVEDMDFEGQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00602113;
90% Identity: -
80% Identity: -