Dqui014390.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila quinaria
Gene Symbol
RREB1
Assembly
GCA_035047525.1
Location
JAWNPO010000455.1:31778161-31784996[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.04 3.2 8.7 0.8 1 21 241 261 241 263 0.93
2 13 0.00038 0.03 15.1 0.2 1 23 273 295 273 295 0.98
3 13 9.1e-05 0.0072 17.1 7.3 1 23 301 323 301 323 0.98
4 13 1.9 1.5e+02 3.5 2.6 2 20 562 580 562 582 0.93
5 13 0.041 3.3 8.7 0.1 1 23 738 760 738 760 0.97
6 13 1.4e-05 0.0011 19.6 0.7 1 23 770 792 770 792 0.99
7 13 0.00093 0.074 13.9 2.0 1 23 798 821 798 821 0.97
8 13 0.0033 0.27 12.2 2.0 1 23 1107 1130 1107 1130 0.95
9 13 9.7e-05 0.0077 17.0 0.3 2 23 1479 1500 1478 1500 0.97
10 13 0.16 13 6.8 6.3 1 23 1506 1529 1506 1529 0.97
11 13 5 4e+02 2.2 3.6 1 23 1660 1683 1660 1683 0.79
12 13 0.0095 0.76 10.7 0.5 3 23 1751 1771 1749 1771 0.96
13 13 0.0015 0.12 13.2 4.8 1 23 1777 1799 1777 1799 0.99

Sequence Information

Coding Sequence
ATGCTGGCCACACAACAgcacacaacagcaactgttgctgctgcaacaacaacaacaacgacatcagcagcagcaggagcaacagttgccagCGACATAGATCGCCAGCGTCGTGATTCAACCACCTCAGAATCCTCGCTGGAGCATCTCGACTTGGGACGCACACCAAAGAagctcagcagcagcagcggagCGCCGCAGCCGACGTCGACGCCGCacgaaacaacaacgacgacgacgacgacgtcgcgCAAGCGCAAGCtgcgacaacagcagcagcagcagcaacaacaacaacatttgctcTCCGATGACgatgagcagcagctgcagcaacaacaacaacaacagttggaTCAGTCAGCGCAGCGACCGCGTCACAAGCAGCGACGCAGCGCCAGCATTGTCGTCGACTACAGCGCCAGCGGCGACGCCAGTTCGCTGCGCAAAAAGTTCCGACTGAATCGCAGCAGCGAACTCTCTGAATCGGGTTTCGTTGATGGCAGCGCGCATAGCGGTTACTTGCTCAGCAGCAgcgccggcagcagcagcgcacaGTCCGCCTCGGCAGcggtcgcagcagcagcagcagccgcagttGCAGCGCAGCAGGCGTCAGCGTCAACGTCAAGCAGCTCGGGCGGCTCGTCACCTCATCAAGGCCTCTCGTGCCAGTCGAGTGCCGAATCGGGAATCGGCGCCGGCGACGATCACATGAAATACTTGTGCCCCATCTGTGAGGTCGTCTCGGCCACGCCCCACGAGTTCACCAATCACATACGTTGCCACAATTACGCCAACGGCGACACAGAGAACTTCACCTGCCGCATCTGCTCAAAGGTGTTGTCGTCGGCCTCGTCGCTGGACAGACACGTGTTGGTGCACACGGGAGAGCGACCGTTTAACTGCCGTTATTGCCACTTGACATTCACAACGAACGGCAACATGCATCGTCACATGCGAACCCACAAGCAACATCAAACGCagacacagcagcagcagcagcagcaacagtcgcaatcgcagcagcaacaacagtcacagtcacagtcacagcagcaacagtcgcagtcgcagtcacagcaacagcaacagcgacgacagcaacatgcgacaacagcagcaattgccACACAGTCAGCTGGTGGCAGATCCGAGAGTTATGAGAGTGACGCAAGTTGTTCAACGGATGTGTCCAGTGCACAAagtcacagcagcaacagcaacagcagcagcagcaatcactccaacaacaacaataacaataacaagctcagcaacaacaacaacaacaacaacaataatgaggaggaggaggagctggagaaagagcagcagcagcatgtGGTTGCTGCCACAATTTGTGGCAAGCAGCGACGCCATaaaatcaacatcaacaacaacaacataatggacaaagaagaagaggagaaCGCGGAGGACGAGGAGCGAGTTGAGAGCGATGTGGAGAGCGTCGAGGAGGAGGATGTGGCACAACTGATAACCTCCACGCCCGATGTGGCAACGCTGCTCGCCTCCTCCGGCGGCACATCGCCCAGTGAATCGCCGGCACCGCCTCCCATGATGTTGCTGCTCAGCTGTCCCGCCTGCGAGGCGGATGATTTTGAATCATTGCCCGCGTTGTGGCAACACTTGGATGCCCAGCATGCGGATATACCCGCCAAATGTCGCGAGTGCGAGGTAATCTTTGGCACCCATCGCCAGTTGCAGACGCACAGTTGCCGCGGTGTCAATGGCCTGCACATGTTGCCGGCAATGTTGGCGGCCAGTTCCAGTCCCAAGCACGAAATCGAGGAGCAGGAGGACGAGGAAGATGAGGAGCAGCAGGAAGATGaggagcgggagcgggagcatcaacaacagcaacaacagcagcaacaacaaagcgaaCGTGACGAGTTCTTTCAACAACTGTACAACAAGAGTAAATCCAATATTGTTGCGCCGTTGCCATCACCCATCAAACACGAACTGGCCACAGATCGCGGCGACTCTCGTCAGGATTTGGCCGACATTCAGAGCATCCTCAACATGGCCAGCTCCAGCTGCACCTCCAGCTTTCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCTGCTCCAGCCAGTACTCGCTGGACGGCCGCGATGGCGACGAGGAGGCACAGGATGCCTTCACCAGCGAATTCCGACGCATGAAATTGCGCGGCGAATTCCCCTGCAAATTGTGCGTGGCCGTGTTTCCCAATTTGCGTGCCCTGAAGGGTCACAATCGTGTCCACCTGGCTGCCGTGGGTCCCGCTGGTCCGTTCAGGTGCAACATGTGCCCCTATGCGGTGTGCGACAAGGCGGCGCTGGTGCGGCACATGCGCACCCACAACGGGGATCGTCCGTACGAGTGCGCCGTGTGCAACTACGCGTTCACCACCAAGGCCAACTGCGAGCGACACCTGCGCAATCGGCACAGCAAAACGAGCCGCGAGGATGTGAAGCGTGCCATTGTCTATCATCCGGCGGAGGATGCCAGCTGTGATGAGGCCAAATCGGGTCAGAGATTGAACGACTCCGATTTGACATCGGGTGACATCAGCTATCGCTCCATGTCGCCCACTGTGGAGCCAGCATCGCAGCTGAAGCACATGTTGCTGGCGGAGaacaccacaacaacaactgtggcGCCAGCAACaccaactgttgctgctgctgctgtcaagACGGCGCCATCCAAGATTCAGGTCAAGAGCCTGGATCAATTGGTGGACAAACCGTTGGCGCCTGCTTTGGATCTCAGCATGGATGTTTTGGATCTGAGCAAAAAGGAGCGACCACAGGAATTGCCacaggagcaacagcaacaacagcagcagcagcagcagcagcaacagcagcagcagcagcaacgcgAGCAACGCGAACGCGAGCGTAAATTGCTGCTgtgtcagcaacagcagcagcaacaacagcagcagcaactttttGGCGCTGGCGATGCTGCCACACAGTACATGCAACAATTGTTTCGCAATCTCATGTTCCAGCAATCACCAGCATTTCCATTCTTCAGCTTTATGccgccaacagcaacagcggaCAAAACCagcgcagcaacagcagcagctgcattgCCCACgacggcagcaacagctgctgttaAGCCGGCCACAAATGCTGCCTTGGgtctgccactgccactgcccgTTGTGGGCGGTGTGGGCGGTGTGGGCGTGCCTGTGCCCGCGGGCGGACCCGTCAAAATGGTAATCAAAAATGGCGTGCTGATgccaaagcaaaaacaacgTCGCTATCGCACTGAGCGACCCTTTGCCTGCGAACATTGCTCGGCGCGATTCACGCTGCGCTCGAACATGGAGCGACATGTGAAGCAGCAGCATCCGCAGTTCTATGCCCAGAGGCAGCGCAGTGGCCACCACGTGATGCGCGGACGCGGCGCATCCTCGAatgcaacggcagcagcagcagctgcagccgccgccgcagcagcagcagccgcagcggcagcagcaatgTCCAATCTgagccagcagcaacatggcCATCATGCGCATCACGCGCACATTTCGGATCAGGTGAAATACGCGATATTGGCGCAACAGCTGAAGGCGCGCAAGGATACGGATCTGTTGCAGCAGGCGCTGGCACATGGCTCCAGCAGTGTGGCCGGCAATCCTCTACAGCATTTTGGCTACAAgcaatacaacaacagcagcagcaacagcaacagcaatggtAATGCCAGCAATGGACATcatgttgctgatgatgatgagcccAAATTGATAATTGATGAGGATGATGAGCTGGATGAGGACATGGATGATGATTTAATGGAGGAGGACGACGAGGAGCTGGatgaggagcaggaggagcagcaggaggaggctgagcagcagcagcaacagttggaGCAGCAACCGCCCAGAACTTCAACGCCCATTGAGGCGGCCAAAAAGGTGGCGGAAACCATTCTGGAGCAGGCCATCAAGGCGGGCAAAGATCAGGCCAAAAAGTTGCCAACACCaacagccacgcccacgcccacgcccacgcccacacccacacccactccaactgccacgcccacagcaaCCACAATGAAAACAATGATTGCCCAAGCGGAATCCGTGGCCAAATCCCTCAAAGAAGTGGCCAGCTCACCGTTCAAAGATGAATCTCAAGATCTGGTGCCGGTGGCCAAGCTGGTGGACAATGCCACCAGCAACCAGGTGAGCTTCAATAGCTACTTTCGACCCAGCGATGTGGCCAACCACATGGAACAGTCCGACGAGGAGGGCCTGGTCGCCTCCGGCAGTGCCAGCGAGAGCAACAACTCCGGCACCGAGGAcgtcaccagcagcagcagcagcagcaatgagCCCAAAAAGAAATCCGCCTACAGTCTGGCGCCCAATCGTGTCAGCTGTCCGTACTGCCAGCGCATGTTCCCCTGGAGCAGCAGCCTGAGGCGCCACATCCTGACGCACACGGGTCAGAAGCCGTTCAAGTGCTCCCACTGCCCATTGCTGTTTACCACCAAGAGCAACTGCGATCGCCATTTGCTGCGGAAGCATGGCAACGTGGAGAGTGCGATGAGTGTCTATGTGCCCACGGAGGATGTGAGTGAACCGATACCAGTGCCCAAATCGGTGGAGGAAATTGAGCTGGAGGAGCAGCGACGACGCAAGGCGGAGCAGCTGGAGCGGGAGCGAGAAAGGGAGCTGGAGCGGGAGCGGGAACTGGAGCGGGAGCGGGAATtggagcgggagcgggagcgggagcgTGAACGGGAGCGGGATTTGGAGcgggaacagcagcagcagcagcagcaactcatCCAGCAATTGGCTGCAGCGGCACAAATGGTTGCCGCCTCCGTTTCCGCCGCCAACTCCTCCGTCTCATCTCCGCCTGGAGCACAGTCCGGAAACAGTCCCGGCGAAATCCAAGGCAGCGATTTGCCCTACAAGTGCCATCTCTGCGAATATTCGTTTGGCGAGCGTCTGCAATGCTTGGAGCACATCAAGCAACAACATGCCCATGAGTTTGCCCTGCTGCTGGCCAAAGGCGCCATTGAAACGGaggagcaacagttgccagCACCGACAGCAGCaccgacagcagcagcaactgttccgccgccaacaacaacaacagttgcctcCGATGAGGATTCGGGTCTGGCCACACGTGCCACAAATGTCAAATATCCCGATTATAGCAATCGCAAGGTGATTTGCGCCTTTTGTGTGCGTCGCTTTTGGTCCACGGAGGATCTGAGGCGTCACATGCGAACGCATTCCGGCGAGCGGCCATTTCAGTGCGAGATCTGCCTGAGGAAGTTCACGCTGAAGCACAGCATGTTGCGGCACATGAAGAAGCACAGTGGACGCAGTCACAATGGCGATTTGGGTGCACAATCCGATTGCTCCGATGATGAGcagtctgccacgcctcccaGCACGCCCACGCCCATGATAATGCCACaagcgaacaacaacaacaacaacaacaataacaacacttgtcacaataacaacaacacaaataacaacaacaacaacaacaacagtaaacaAAGCCTACGTTTGCCAAAATTGCATGAACTGTTGGACAAGGCGAATGAATGGCGTGTGAGTCGTTCATGTGAACATAAGGAAAACATTGCTGAATCTGCCACAGCATCGGCAGCAagtgccacagcagcagcagcggcagcggcagctgttgccgttgccagtGGCGATTTAATTGGCAATTTGTTGGGCATAAGTGATCAAGGTATACTCAATAAGTTGCTTTCCTCCGCAGACGAGGCAGCTAAGCTACTAGGTGTTGACAAATAA
Protein Sequence
MLATQQHTTATVAAATTTTTTSAAAGATVASDIDRQRRDSTTSESSLEHLDLGRTPKKLSSSSGAPQPTSTPHETTTTTTTTSRKRKLRQQQQQQQQQQHLLSDDDEQQLQQQQQQQLDQSAQRPRHKQRRSASIVVDYSASGDASSLRKKFRLNRSSELSESGFVDGSAHSGYLLSSSAGSSSAQSASAAVAAAAAAAVAAQQASASTSSSSGGSSPHQGLSCQSSAESGIGAGDDHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQTQTQQQQQQQQSQSQQQQQSQSQSQQQQSQSQSQQQQQRRQQHATTAAIATQSAGGRSESYESDASCSTDVSSAQSHSSNSNSSSSNHSNNNNNNNKLSNNNNNNNNNEEEEELEKEQQQHVVAATICGKQRRHKININNNNIMDKEEEENAEDEERVESDVESVEEEDVAQLITSTPDVATLLASSGGTSPSESPAPPPMMLLLSCPACEADDFESLPALWQHLDAQHADIPAKCRECEVIFGTHRQLQTHSCRGVNGLHMLPAMLAASSSPKHEIEEQEDEEDEEQQEDEEREREHQQQQQQQQQQSERDEFFQQLYNKSKSNIVAPLPSPIKHELATDRGDSRQDLADIQSILNMASSSCTSSFLRNFEQSVNTPCSSQYSLDGRDGDEEAQDAFTSEFRRMKLRGEFPCKLCVAVFPNLRALKGHNRVHLAAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHSKTSREDVKRAIVYHPAEDASCDEAKSGQRLNDSDLTSGDISYRSMSPTVEPASQLKHMLLAENTTTTTVAPATPTVAAAAVKTAPSKIQVKSLDQLVDKPLAPALDLSMDVLDLSKKERPQELPQEQQQQQQQQQQQQQQQQQQREQRERERKLLLCQQQQQQQQQQQLFGAGDAATQYMQQLFRNLMFQQSPAFPFFSFMPPTATADKTSAATAAAALPTTAATAAVKPATNAALGLPLPLPVVGGVGGVGVPVPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSNATAAAAAAAAAAAAAAAAAAAMSNLSQQQHGHHAHHAHISDQVKYAILAQQLKARKDTDLLQQALAHGSSSVAGNPLQHFGYKQYNNSSSNSNSNGNASNGHHVADDDEPKLIIDEDDELDEDMDDDLMEEDDEELDEEQEEQQEEAEQQQQQLEQQPPRTSTPIEAAKKVAETILEQAIKAGKDQAKKLPTPTATPTPTPTPTPTPTPTATPTATTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSNEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRKAEQLERERERELERERELERERELERERERERERERDLEREQQQQQQQLIQQLAAAAQMVAASVSAANSSVSSPPGAQSGNSPGEIQGSDLPYKCHLCEYSFGERLQCLEHIKQQHAHEFALLLAKGAIETEEQQLPAPTAAPTAAATVPPPTTTTVASDEDSGLATRATNVKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGDLGAQSDCSDDEQSATPPSTPTPMIMPQANNNNNNNNNNTCHNNNNTNNNNNNNNSKQSLRLPKLHELLDKANEWRVSRSCEHKENIAESATASAASATAAAAAAAAVAVASGDLIGNLLGISDQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00534044;
90% Identity
-
80% Identity
-